RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 UPP2O95045 317 aa11.53□□□□□ -0.56
SMG1-209ENST00000563836 SCARF1Q14162 830 aa11.53□□□□□ -0.56
SMG1-209ENST00000563836 PURBQ96QR8 312 aaKnown RBP11.53□□□□□ -0.56
SMG1-209ENST00000563836 ABCC3O15438 1527 aa11.53□□□□□ -0.56
SMG1-209ENST00000563836 TRPM2O94759 1503 aa11.53□□□□□ -0.56
SMG1-209ENST00000563836 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
SMG1-209ENST00000563836 KDF1Q8NAX2 398 aaPredicted RBP11.52□□□□□ -0.57
SMG1-209ENST00000563836 L3MBTL2Q969R5 705 aa11.52□□□□□ -0.57
SMG1-209ENST00000563836 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
SMG1-209ENST00000563836 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
SMG1-209ENST00000563836 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
SMG1-209ENST00000563836 CALR3Q96L12 384 aaKnown RBP11.51□□□□□ -0.57
SMG1-209ENST00000563836 AGBL1Q96MI9 1066 aa11.51□□□□□ -0.57
SMG1-209ENST00000563836 OSBPL3Q9H4L5 887 aa11.51□□□□□ -0.57
SMG1-209ENST00000563836 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
SMG1-209ENST00000563836 ARHGAP31Q2M1Z3 1444 aa11.51□□□□□ -0.57
SMG1-209ENST00000563836 BMP2P12643 396 aa11.5□□□□□ -0.57
SMG1-209ENST00000563836 SKIP12755 728 aa11.5□□□□□ -0.57
SMG1-209ENST00000563836 USP4Q13107 963 aa11.5□□□□□ -0.57
SMG1-209ENST00000563836 RGL3Q3MIN7 710 aa11.5□□□□□ -0.57
SMG1-209ENST00000563836 ZNF326Q5BKZ1 582 aaKnown RBP11.5□□□□□ -0.57
SMG1-209ENST00000563836 C6orf118Q5T5N4 469 aa11.5□□□□□ -0.57
SMG1-209ENST00000563836 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
SMG1-209ENST00000563836 SPINT1O43278 529 aa11.49□□□□□ -0.57
SMG1-209ENST00000563836 LZTS3O60299 673 aaPredicted RBP11.49□□□□□ -0.57
SMG1-209ENST00000563836 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
SMG1-209ENST00000563836 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
SMG1-209ENST00000563836 SIRT1Q96EB6 747 aa11.49□□□□□ -0.57
SMG1-209ENST00000563836 SLC52A1Q9NWF4 448 aa11.49□□□□□ -0.57
SMG1-209ENST00000563836 PTPRTO14522 1441 aa11.49□□□□□ -0.57
SMG1-209ENST00000563836 ATP5J2-PTCD1G3V325 749 aa11.48□□□□□ -0.57
SMG1-209ENST00000563836 PTGIRP43119 386 aa11.48□□□□□ -0.57
SMG1-209ENST00000563836 RELBQ01201 579 aa11.48□□□□□ -0.57
SMG1-209ENST00000563836 OXLD1Q5BKU9 147 aa11.48□□□□□ -0.57
SMG1-209ENST00000563836 TBC1D9Q6ZT07 1266 aa11.48□□□□□ -0.57
SMG1-209ENST00000563836 CYP2U1Q7Z449 544 aa11.48□□□□□ -0.57
SMG1-209ENST00000563836 NPATQ14207 1427 aa11.47□□□□□ -0.57
SMG1-209ENST00000563836 C11orf95C9JLR9 678 aaPredicted RBP11.47□□□□□ -0.57
SMG1-209ENST00000563836 ATP9BO43861 1147 aa11.47□□□□□ -0.57
SMG1-209ENST00000563836 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
SMG1-209ENST00000563836 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
SMG1-209ENST00000563836 SNRPBP14678 240 aaKnown RBP11.46□□□□□ -0.57
SMG1-209ENST00000563836 MROH2AA6NES4 1674 aa11.46□□□□□ -0.58
SMG1-209ENST00000563836 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.58
SMG1-209ENST00000563836 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
SMG1-209ENST00000563836 SOS2Q07890 1332 aaPredicted RBP11.45□□□□□ -0.58
SMG1-209ENST00000563836 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
SMG1-209ENST00000563836 ZNF395Q9H8N7 513 aaPredicted RBP11.45□□□□□ -0.58
SMG1-209ENST00000563836 FER1L4A9Z1Z3 1794 aa11.45□□□□□ -0.58
SMG1-209ENST00000563836 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
SMG1-209ENST00000563836 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
SMG1-209ENST00000563836 NCOA4Q13772 614 aa11.44□□□□□ -0.58
SMG1-209ENST00000563836 EML3Q32P44 896 aa11.44□□□□□ -0.58
SMG1-209ENST00000563836 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
SMG1-209ENST00000563836 ZMYM3Q14202 1370 aa11.43□□□□□ -0.58
SMG1-209ENST00000563836 GNRH1P01148 92 aa11.43□□□□□ -0.58
SMG1-209ENST00000563836 INSM2Q96T92 566 aaPredicted RBP11.43□□□□□ -0.58
SMG1-209ENST00000563836 PPP1R12CQ9BZL4 782 aa11.43□□□□□ -0.58
SMG1-209ENST00000563836 TFIP11Q9UBB9 837 aaKnown RBP11.43□□□□□ -0.58
SMG1-209ENST00000563836 A0A1W2PRU2 124 aa11.42□□□□□ -0.58
SMG1-209ENST00000563836 USP17L3A6NCW0 530 aa11.42□□□□□ -0.58
SMG1-209ENST00000563836 USP17L4A6NCW7 530 aa11.42□□□□□ -0.58
SMG1-209ENST00000563836 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
SMG1-209ENST00000563836 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
SMG1-209ENST00000563836 USP17L1Q7RTZ2 530 aa11.42□□□□□ -0.58
SMG1-209ENST00000563836 NOS1P29475 1434 aa11.42□□□□□ -0.58
SMG1-209ENST00000563836 ERVK-7P63135 1459 aa11.41□□□□□ -0.58
SMG1-209ENST00000563836 TTLL8A6PVC2 850 aa11.41□□□□□ -0.58
SMG1-209ENST00000563836 CTSOP43234 321 aaPredicted RBP11.41□□□□□ -0.58
SMG1-209ENST00000563836 DEPDC4Q8N2C3 294 aa11.41□□□□□ -0.58
SMG1-209ENST00000563836 NOD1Q9Y239 953 aa11.41□□□□□ -0.58
SMG1-209ENST00000563836 MAFBQ9Y5Q3 323 aaPredicted RBP11.41□□□□□ -0.58
SMG1-209ENST00000563836 UHRF1BP1Q6BDS2 1440 aa11.41□□□□□ -0.58
SMG1-209ENST00000563836 ROCK2O75116 1388 aaKnown RBP11.41□□□□□ -0.58
SMG1-209ENST00000563836 CLN3Q13286 438 aa11.4□□□□□ -0.58
SMG1-209ENST00000563836 CARD11Q9BXL7 1154 aa11.4□□□□□ -0.58
SMG1-209ENST00000563836 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
SMG1-209ENST00000563836 SPATA31E1Q6ZUB1 1445 aa11.39□□□□□ -0.59
SMG1-209ENST00000563836 ARHGEF10LQ9HCE6 1279 aa11.39□□□□□ -0.59
SMG1-209ENST00000563836 POLMQ9NP87 494 aaPredicted RBP11.39□□□□□ -0.59
SMG1-209ENST00000563836 DNMT3LQ9UJW3 386 aa11.39□□□□□ -0.59
SMG1-209ENST00000563836 PCDHGA11Q9Y5H2 935 aa11.39□□□□□ -0.59
SMG1-209ENST00000563836 PIK3C2BO00750 1634 aa11.38□□□□□ -0.59
SMG1-209ENST00000563836 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
SMG1-209ENST00000563836 GPC1P35052 558 aa11.38□□□□□ -0.59
SMG1-209ENST00000563836 RNF144AP50876 292 aaPredicted RBP11.38□□□□□ -0.59
SMG1-209ENST00000563836 FOXD4L5Q5VV16 416 aaPredicted RBP11.38□□□□□ -0.59
SMG1-209ENST00000563836 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
SMG1-209ENST00000563836 TNRQ92752 1358 aa11.38□□□□□ -0.59
SMG1-209ENST00000563836 RALGAPBQ86X10 1494 aa11.38□□□□□ -0.59
SMG1-209ENST00000563836 SYNMO15061 1565 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 UGGT1Q9NYU2 1555 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 IL2RAP01589 272 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 IDI1Q13907 227 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMG1-209ENST00000563836 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 RAB6BQ9NRW1 208 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 MYOM2P54296 1465 aa11.37□□□□□ -0.59
SMG1-209ENST00000563836 PRAG1Q86YV5 1406 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms