RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-208ENST00000563688 C2orf49Q9BVC5 232 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-208ENST00000563688 DCDC2BA2VCK2 349 aa8.95□□□□□ -0.98
SCAPER-208ENST00000563688 KHNYNO15037 678 aaKnown RBP8.95□□□□□ -0.98
SCAPER-208ENST00000563688 PPP1R12BO60237 982 aaPredicted RBP8.95□□□□□ -0.98
SCAPER-208ENST00000563688 SRPK2P78362 688 aaKnown RBP8.95□□□□□ -0.98
SCAPER-208ENST00000563688 LRRC69Q6ZNQ3 347 aa8.95□□□□□ -0.98
SCAPER-208ENST00000563688 HINFPQ9BQA5 517 aa8.95□□□□□ -0.98
SCAPER-208ENST00000563688 GJA3Q9Y6H8 435 aa8.95□□□□□ -0.98
SCAPER-208ENST00000563688 LGR5O75473 907 aa8.94□□□□□ -0.98
SCAPER-208ENST00000563688 RFX1P22670 979 aa8.94□□□□□ -0.98
SCAPER-208ENST00000563688 MARSP56192 900 aaKnown RBP8.94□□□□□ -0.98
SCAPER-208ENST00000563688 CDCA8Q53HL2 280 aa8.94□□□□□ -0.98
SCAPER-208ENST00000563688 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
SCAPER-208ENST00000563688 STRN4Q9NRL3 753 aa8.94□□□□□ -0.98
SCAPER-208ENST00000563688 GDF2Q9UK05 429 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-208ENST00000563688 CHMP3Q9Y3E7 222 aa8.94□□□□□ -0.98
SCAPER-208ENST00000563688 CD33P20138 364 aa8.93□□□□□ -0.98
SCAPER-208ENST00000563688 GOLGA6L1Q8N7Z2 621 aa8.93□□□□□ -0.98
SCAPER-208ENST00000563688 GALNT6Q8NCL4 622 aa8.93□□□□□ -0.98
SCAPER-208ENST00000563688 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
SCAPER-208ENST00000563688 KLF15Q9UIH9 416 aa8.93□□□□□ -0.98
SCAPER-208ENST00000563688 SHISA8B8ZZ34 492 aa8.92□□□□□ -0.98
SCAPER-208ENST00000563688 IGFBP4P22692 258 aa8.92□□□□□ -0.98
SCAPER-208ENST00000563688 LAMC2Q13753 1193 aa8.92□□□□□ -0.98
SCAPER-208ENST00000563688 ALDH16A1Q8IZ83 802 aa8.92□□□□□ -0.98
SCAPER-208ENST00000563688 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
SCAPER-208ENST00000563688 SCARF2Q96GP6 870 aaPredicted RBP8.92□□□□□ -0.98
SCAPER-208ENST00000563688 GGA1Q9UJY5 639 aa8.92□□□□□ -0.98
SCAPER-208ENST00000563688 ARAFP10398 606 aa8.91□□□□□ -0.98
SCAPER-208ENST00000563688 RASSF7Q02833 373 aa8.91□□□□□ -0.98
SCAPER-208ENST00000563688 FAM200AQ8TCP9 573 aa8.91□□□□□ -0.98
SCAPER-208ENST00000563688 CHMP7Q8WUX9 453 aaPredicted RBP8.91□□□□□ -0.98
SCAPER-208ENST00000563688 EDARADDQ8WWZ3 215 aa8.91□□□□□ -0.98
SCAPER-208ENST00000563688 NEUROD4Q9HD90 331 aa8.91□□□□□ -0.98
SCAPER-208ENST00000563688 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
SCAPER-208ENST00000563688 DNMT3AQ9Y6K1 912 aaPredicted RBP8.91□□□□□ -0.98
SCAPER-208ENST00000563688 CNTNAP5Q8WYK1 1306 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 RNF225M0QZC1 329 aaPredicted RBP8.9□□□□□ -0.98
SCAPER-208ENST00000563688 WEE1P30291 646 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 SLCO4C1Q6ZQN7 724 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 HSH2DQ96JZ2 352 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 SUSD3Q96L08 255 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 ANKIB1Q9P2G1 1089 aa8.9□□□□□ -0.98
SCAPER-208ENST00000563688 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
SCAPER-208ENST00000563688 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-208ENST00000563688 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
SCAPER-208ENST00000563688 EPXP11678 715 aa8.88□□□□□ -0.99
SCAPER-208ENST00000563688 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
SCAPER-208ENST00000563688 IRS1P35568 1242 aa8.88□□□□□ -0.99
SCAPER-208ENST00000563688 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
SCAPER-208ENST00000563688 GRIN2CQ14957 1233 aa8.88□□□□□ -0.99
SCAPER-208ENST00000563688 BEND7Q8N7W2 519 aaPredicted RBP8.88□□□□□ -0.99
SCAPER-208ENST00000563688 NOVA2Q9UNW9 492 aaKnown RBP8.88□□□□□ -0.99
SCAPER-208ENST00000563688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-208ENST00000563688 GDF11O95390 407 aa8.87□□□□□ -0.99
SCAPER-208ENST00000563688 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
SCAPER-208ENST00000563688 ZNF468Q5VIY5 522 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-208ENST00000563688 TMEM151AQ8N4L1 468 aa8.87□□□□□ -0.99
SCAPER-208ENST00000563688 ZMIZ1Q9ULJ6 1067 aa8.87□□□□□ -0.99
SCAPER-208ENST00000563688 ADH6P28332 368 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 KCNQ4P56696 695 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 FAM69CQ0P6D2 419 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 KANK3Q6NY19 840 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 FCHSD1Q86WN1 690 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 BTBD6Q96KE9 485 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
SCAPER-208ENST00000563688 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
SCAPER-208ENST00000563688 PCBP4P57723 403 aaKnown RBP8.85□□□□□ -0.99
SCAPER-208ENST00000563688 TYRO3Q06418 890 aa8.85□□□□□ -0.99
SCAPER-208ENST00000563688 RTN1Q16799 776 aa8.85□□□□□ -0.99
SCAPER-208ENST00000563688 CEP63Q96MT8 703 aa8.85□□□□□ -0.99
SCAPER-208ENST00000563688 BCS1LQ9Y276 419 aa8.85□□□□□ -0.99
SCAPER-208ENST00000563688 FOXO3O43524 673 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 ATG7O95352 703 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 BTLAQ7Z6A9 289 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 SLC30A3Q99726 388 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 MDFIQ99750 246 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 DMGDHQ9UI17 866 aaKnown RBP8.84□□□□□ -0.99
SCAPER-208ENST00000563688 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
SCAPER-208ENST00000563688 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
SCAPER-208ENST00000563688 PHF20L1A8MW92 1017 aa8.83□□□□□ -1
SCAPER-208ENST00000563688 SWI5Q1ZZU3 235 aa8.83□□□□□ -1
SCAPER-208ENST00000563688 LINC00114Q6XXX2 140 aa8.83□□□□□ -1
SCAPER-208ENST00000563688 HIF1AQ16665 826 aa8.82□□□□□ -1
SCAPER-208ENST00000563688 IER5Q5VY09 327 aa8.82□□□□□ -1
SCAPER-208ENST00000563688 PODNQ7Z5L7 613 aa8.82□□□□□ -1
SCAPER-208ENST00000563688 SYT9Q86SS6 491 aa8.82□□□□□ -1
SCAPER-208ENST00000563688 STK32AQ8WU08 396 aa8.82□□□□□ -1
SCAPER-208ENST00000563688 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
SCAPER-208ENST00000563688 KCNH4Q9UQ05 1017 aa8.82□□□□□ -1
SCAPER-208ENST00000563688 SPEM2Q0P670 501 aa8.81□□□□□ -1
SCAPER-208ENST00000563688 OCLNQ16625 522 aa8.81□□□□□ -1
SCAPER-208ENST00000563688 KCTD17Q8N5Z5 321 aa8.81□□□□□ -1
SCAPER-208ENST00000563688 PBXIP1Q96AQ6 731 aa8.81□□□□□ -1
SCAPER-208ENST00000563688 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
SCAPER-208ENST00000563688 TGFBR3LH3BV60 316 aa8.8□□□□□ -1
SCAPER-208ENST00000563688 SIN3BO75182 1162 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms