RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 STRN4Q9NRL3 753 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 GDF2Q9UK05 429 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 HCN4Q9Y3Q4 1203 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
HMGB1P33-201ENST00000563485 EFSO43281 561 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 GDF11O95390 407 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 HIRAP54198 1017 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 TMEM151AQ8N4L1 468 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 GOLGA6L1Q8N7Z2 621 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 PHACTR1Q9C0D0 580 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 VRTNQ9H8Y1 702 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 CHMP3Q9Y3E7 222 aa7.19□□□□□ -1.26
HMGB1P33-201ENST00000563485 FAM196BA6NMK8 535 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 ARAFP10398 606 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 FAM182BQ5T319 152 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 SLCO4C1Q6ZQN7 724 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 KCTD17Q8N5Z5 321 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 EDARADDQ8WWZ3 215 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 SCG3Q8WXD2 468 aaKnown RBP7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 DNMT3AQ9Y6K1 912 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 ATAD2Q6PL18 1390 aa7.18□□□□□ -1.26
HMGB1P33-201ENST00000563485 NEURL1BA8MQ27 555 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 ANKMY2Q8IV38 441 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 GAS2L2Q8NHY3 880 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 HSH2DQ96JZ2 352 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 HINFPQ9BQA5 517 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 NEUROD4Q9HD90 331 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 GPC6Q9Y625 555 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P33-201ENST00000563485 RFX1P22670 979 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 SNRPNP63162 240 aaKnown RBP7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 GRIN2CQ14957 1233 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 CDCA8Q53HL2 280 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 C1orf53Q5VUE5 145 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 PODNQ7Z5L7 613 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 CHMP7Q8WUX9 453 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 ARXQ96QS3 562 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 C2orf49Q9BVC5 232 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 MARK1Q9P0L2 795 aa7.16□□□□□ -1.26
HMGB1P33-201ENST00000563485 PHF20L1A8MW92 1017 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 EPXP11678 715 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 LAMC2Q13753 1193 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 ALDH16A1Q8IZ83 802 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 STAG2Q8N3U4 1231 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 BEND7Q8N7W2 519 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 NGLY1Q96IV0 654 aa7.15□□□□□ -1.26
HMGB1P33-201ENST00000563485 AMPD1P23109 780 aa7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 ADH6P28332 368 aa7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 PCBP4P57723 403 aaKnown RBP7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 SFSWAPQ12872 951 aaKnown RBP7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 ZNF468Q5VIY5 522 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 SUSD3Q96L08 255 aa7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 RRAGCQ9HB90 399 aa7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 PRR12Q9ULL5 1215 aa7.14□□□□□ -1.27
HMGB1P33-201ENST00000563485 HOXB4P17483 251 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P33-201ENST00000563485 BTBD6Q96KE9 485 aa7.13□□□□□ -1.27
HMGB1P33-201ENST00000563485 ZMYND15Q9H091 742 aa7.13□□□□□ -1.27
HMGB1P33-201ENST00000563485 AVENQ9NQS1 362 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P33-201ENST00000563485 IGFBP4P22692 258 aa7.12□□□□□ -1.27
HMGB1P33-201ENST00000563485 CEP63Q96MT8 703 aa7.12□□□□□ -1.27
HMGB1P33-201ENST00000563485 SLC30A3Q99726 388 aa7.12□□□□□ -1.27
HMGB1P33-201ENST00000563485 BRD7Q9NPI1 651 aa7.12□□□□□ -1.27
HMGB1P33-201ENST00000563485 ANKIB1Q9P2G1 1089 aa7.12□□□□□ -1.27
HMGB1P33-201ENST00000563485 TYRO3Q06418 890 aa7.11□□□□□ -1.27
HMGB1P33-201ENST00000563485 SYT9Q86SS6 491 aa7.11□□□□□ -1.27
HMGB1P33-201ENST00000563485 MKL2Q9ULH7 1088 aa7.11□□□□□ -1.27
HMGB1P33-201ENST00000563485 CHSY3Q70JA7 882 aa7.1□□□□□ -1.27
HMGB1P33-201ENST00000563485 FAM200AQ8TCP9 573 aa7.1□□□□□ -1.27
HMGB1P33-201ENST00000563485 DCAF5Q96JK2 942 aa7.1□□□□□ -1.27
HMGB1P33-201ENST00000563485 NOVA2Q9UNW9 492 aaKnown RBP7.1□□□□□ -1.27
HMGB1P33-201ENST00000563485 WEE1P30291 646 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 DGKGP49619 791 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 SPEM2Q0P670 501 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 RTN1Q16799 776 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 LINC00114Q6XXX2 140 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 BTLAQ7Z6A9 289 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 RAB44Q7Z6P3 723 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
HMGB1P33-201ENST00000563485 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 KCNQ4P56696 695 aa7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 GPAT2Q6NUI2 795 aa7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 KCNH4Q9UQ05 1017 aa7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 BCS1LQ9Y276 419 aa7.08□□□□□ -1.28
HMGB1P33-201ENST00000563485 FOXO3O43524 673 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 SIN3BO75182 1162 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 COL8A1P27658 744 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 SRPK2P78362 688 aaKnown RBP7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 HIF1AQ16665 826 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 STK32AQ8WU08 396 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 MDFIQ99750 246 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 QTRT2Q9H974 415 aaKnown RBP7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 KLK14Q9P0G3 267 aa7.07□□□□□ -1.28
HMGB1P33-201ENST00000563485 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P33-201ENST00000563485 ARID3CA6NKF2 412 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms