RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 AMOTQ4VCS5 1084 aa13.74□□□□□ -0.21
SNX29-202ENST00000563308 SULT6B1Q6IMI4 303 aa13.74□□□□□ -0.21
SNX29-202ENST00000563308 HHIPL1Q96JK4 782 aa13.73□□□□□ -0.21
SNX29-202ENST00000563308 SAGE1Q9NXZ1 904 aa13.73□□□□□ -0.21
SNX29-202ENST00000563308 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
SNX29-202ENST00000563308 HSP90AB1P08238 724 aaKnown RBP13.72□□□□□ -0.21
SNX29-202ENST00000563308 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
SNX29-202ENST00000563308 SAPCD2Q86UD0 394 aa13.72□□□□□ -0.21
SNX29-202ENST00000563308 ADAMTS7Q9UKP4 1686 aa13.72□□□□□ -0.21
SNX29-202ENST00000563308 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
SNX29-202ENST00000563308 ADAMTSL1Q8N6G6 1762 aa13.71□□□□□ -0.21
SNX29-202ENST00000563308 SERPINB2P05120 415 aa13.71□□□□□ -0.21
SNX29-202ENST00000563308 CC2D1BQ5T0F9 858 aaKnown RBP13.71□□□□□ -0.21
SNX29-202ENST00000563308 CST9Q5W186 159 aa13.71□□□□□ -0.21
SNX29-202ENST00000563308 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.21
SNX29-202ENST00000563308 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
SNX29-202ENST00000563308 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
SNX29-202ENST00000563308 PDE6BP35913 854 aa13.7□□□□□ -0.22
SNX29-202ENST00000563308 CABP4P57796 275 aa13.69□□□□□ -0.22
SNX29-202ENST00000563308 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNX29-202ENST00000563308 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
SNX29-202ENST00000563308 CNKSR1Q969H4 720 aa13.69□□□□□ -0.22
SNX29-202ENST00000563308 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
SNX29-202ENST00000563308 TRAF5O00463 557 aa13.68□□□□□ -0.22
SNX29-202ENST00000563308 TRPA1O75762 1119 aa13.68□□□□□ -0.22
SNX29-202ENST00000563308 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
SNX29-202ENST00000563308 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
SNX29-202ENST00000563308 GPC2Q8N158 579 aa13.68□□□□□ -0.22
SNX29-202ENST00000563308 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
SNX29-202ENST00000563308 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
SNX29-202ENST00000563308 CUL9Q8IWT3 2517 aa13.68□□□□□ -0.22
SNX29-202ENST00000563308 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
SNX29-202ENST00000563308 ZNF541Q9H0D2 1346 aa13.67□□□□□ -0.22
SNX29-202ENST00000563308 NPHP1O15259 732 aa13.67□□□□□ -0.22
SNX29-202ENST00000563308 HMOX1P09601 288 aa13.67□□□□□ -0.22
SNX29-202ENST00000563308 NFIXQ14938 502 aa13.67□□□□□ -0.22
SNX29-202ENST00000563308 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
SNX29-202ENST00000563308 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
SNX29-202ENST00000563308 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
SNX29-202ENST00000563308 AFDNP55196 1824 aaKnown RBP13.66□□□□□ -0.22
SNX29-202ENST00000563308 COL5A3P25940 1745 aaPredicted RBP13.65□□□□□ -0.22
SNX29-202ENST00000563308 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
SNX29-202ENST00000563308 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
SNX29-202ENST00000563308 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
SNX29-202ENST00000563308 GJA3Q9Y6H8 435 aa13.65□□□□□ -0.22
SNX29-202ENST00000563308 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
SNX29-202ENST00000563308 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
SNX29-202ENST00000563308 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
SNX29-202ENST00000563308 SLC52A2Q9HAB3 445 aa13.64□□□□□ -0.23
SNX29-202ENST00000563308 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
SNX29-202ENST00000563308 MRC1P22897 1456 aa13.63□□□□□ -0.23
SNX29-202ENST00000563308 RNMTO43148 476 aaKnown RBP13.63□□□□□ -0.23
SNX29-202ENST00000563308 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
SNX29-202ENST00000563308 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
SNX29-202ENST00000563308 RNF186Q9NXI6 227 aa13.63□□□□□ -0.23
SNX29-202ENST00000563308 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
SNX29-202ENST00000563308 PRPF40BQ6NWY9 871 aaKnown RBP13.62□□□□□ -0.23
SNX29-202ENST00000563308 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
SNX29-202ENST00000563308 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
SNX29-202ENST00000563308 HUNKP57058 714 aa13.61□□□□□ -0.23
SNX29-202ENST00000563308 FKBP4Q02790 459 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX29-202ENST00000563308 INTS5Q6P9B9 1019 aaKnown RBP13.61□□□□□ -0.23
SNX29-202ENST00000563308 SYNE4Q8N205 404 aa13.61□□□□□ -0.23
SNX29-202ENST00000563308 CCDC102AQ96A19 550 aa13.61□□□□□ -0.23
SNX29-202ENST00000563308 TJP1Q07157 1748 aa13.61□□□□□ -0.23
SNX29-202ENST00000563308 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
SNX29-202ENST00000563308 STYK1Q6J9G0 422 aa13.6□□□□□ -0.23
SNX29-202ENST00000563308 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
SNX29-202ENST00000563308 DNAJC10Q8IXB1 793 aa13.6□□□□□ -0.23
SNX29-202ENST00000563308 NARFQ9UHQ1 456 aa13.6□□□□□ -0.23
SNX29-202ENST00000563308 NRXN2Q9P2S2 1712 aa13.59□□□□□ -0.23
SNX29-202ENST00000563308 FZD9O00144 591 aa13.59□□□□□ -0.23
SNX29-202ENST00000563308 KIF23Q02241 960 aaPredicted RBP13.59□□□□□ -0.23
SNX29-202ENST00000563308 ZIC5Q96T25 663 aa13.59□□□□□ -0.23
SNX29-202ENST00000563308 CARMIL3Q8ND23 1372 aa13.58□□□□□ -0.23
SNX29-202ENST00000563308 U2SURPO15042 1029 aaKnown RBP13.58□□□□□ -0.24
SNX29-202ENST00000563308 IARSP41252 1262 aaKnown RBP13.58□□□□□ -0.24
SNX29-202ENST00000563308 INTS3Q68E01 1043 aaKnown RBP13.58□□□□□ -0.24
SNX29-202ENST00000563308 RGMBQ6NW40 437 aa13.58□□□□□ -0.24
SNX29-202ENST00000563308 RTKN2Q8IZC4 609 aa13.58□□□□□ -0.24
SNX29-202ENST00000563308 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
SNX29-202ENST00000563308 MASTLQ96GX5 879 aa13.58□□□□□ -0.24
SNX29-202ENST00000563308 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
SNX29-202ENST00000563308 CYP19A1P11511 503 aaPredicted RBP13.57□□□□□ -0.24
SNX29-202ENST00000563308 PPP2R1AP30153 589 aa13.57□□□□□ -0.24
SNX29-202ENST00000563308 EPS15P42566 896 aa13.57□□□□□ -0.24
SNX29-202ENST00000563308 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
SNX29-202ENST00000563308 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
SNX29-202ENST00000563308 RSPH6AQ9H0K4 717 aa13.56□□□□□ -0.24
SNX29-202ENST00000563308 SOS1Q07889 1333 aaPredicted RBP13.56□□□□□ -0.24
SNX29-202ENST00000563308 ZNF157P51786 506 aaPredicted RBP13.55□□□□□ -0.24
SNX29-202ENST00000563308 ST5P78524 1137 aa13.55□□□□□ -0.24
SNX29-202ENST00000563308 GLIS2Q9BZE0 524 aaPredicted RBP13.55□□□□□ -0.24
SNX29-202ENST00000563308 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
SNX29-202ENST00000563308 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
SNX29-202ENST00000563308 GNAT3A8MTJ3 354 aa13.54□□□□□ -0.24
SNX29-202ENST00000563308 PRKAR2BP31323 418 aa13.54□□□□□ -0.24
SNX29-202ENST00000563308 CDC37L1Q7L3B6 337 aa13.54□□□□□ -0.24
SNX29-202ENST00000563308 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
SNX29-202ENST00000563308 C2orf69Q8N8R5 385 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms