RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 THBS1P07996 1170 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 SMTNP53814 917 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 GTF2IP78347 998 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 SRSF11Q05519 484 aaKnown RBP8.07□□□□□ -1.12
CNOT1-205ENST00000563283 PLEKHM2Q8IWE5 1019 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 SLC4A9Q96Q91 983 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 UCN2Q96RP3 112 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 GPAMQ9HCL2 828 aa8.07□□□□□ -1.12
CNOT1-205ENST00000563283 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
CNOT1-205ENST00000563283 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
CNOT1-205ENST00000563283 MTFR1Q15390 333 aa8.06□□□□□ -1.12
CNOT1-205ENST00000563283 KANK4Q5T7N3 995 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-205ENST00000563283 HDGFL1Q5TGJ6 251 aa8.06□□□□□ -1.12
CNOT1-205ENST00000563283 TRERF1Q96PN7 1200 aa8.06□□□□□ -1.12
CNOT1-205ENST00000563283 MBIPQ9NS73 344 aa8.06□□□□□ -1.12
CNOT1-205ENST00000563283 CDK11AQ9UQ88 783 aaPredicted RBP8.06□□□□□ -1.12
CNOT1-205ENST00000563283 ARHGEF12Q9NZN5 1544 aa8.06□□□□□ -1.12
CNOT1-205ENST00000563283 GPATCH8Q9UKJ3 1502 aaKnown RBP8.06□□□□□ -1.12
CNOT1-205ENST00000563283 TIAM1Q13009 1591 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 PREX2Q70Z35 1606 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 MSX1P28360 303 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 PLA2G4AP47712 749 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 SVOPQ8N4V2 548 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 SERTAD1Q9UHV2 236 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 SIGLEC1Q9BZZ2 1709 aa8.05□□□□□ -1.12
CNOT1-205ENST00000563283 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 A6NJR5 290 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 ATP9BO43861 1147 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 TBC1D9Q6ZT07 1266 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 NIFKQ9BYG3 293 aaKnown RBP8.04□□□□□ -1.12
CNOT1-205ENST00000563283 PHLDB1Q86UU1 1377 aa8.04□□□□□ -1.12
CNOT1-205ENST00000563283 A6NJY4 79 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 CDK2AP1O14519 115 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 BACH1O14867 736 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 ARHGEF15O94989 841 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
CNOT1-205ENST00000563283 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 PGBD3Q8N328 593 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 ZNF358Q9NW07 568 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-205ENST00000563283 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
CNOT1-205ENST00000563283 SAMD9LQ8IVG5 1584 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 CFAP74Q9C0B2 1584 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 LRRC9Q6ZRR7 1453 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 PSME1Q06323 249 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 EFCAB2Q5VUJ9 269 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 C1orf216Q8TAB5 229 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 GLMNQ92990 594 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 CFHR5Q9BXR6 569 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 MAP3K1Q13233 1512 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 EHBP1L1Q8N3D4 1523 aa8.02□□□□□ -1.13
CNOT1-205ENST00000563283 ZNF644Q9H582 1327 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-205ENST00000563283 DENND4BO75064 1496 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-205ENST00000563283 ADGRL1O94910 1474 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 MTUS2Q5JR59 1369 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 ATP4AP20648 1035 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 ATP1A2P50993 1020 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 EFHC2Q5JST6 749 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 AFAP1Q8N556 730 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT1-205ENST00000563283 ADAMTS8Q9UP79 889 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 ZMYM4Q5VZL5 1548 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 YEATS2Q9ULM3 1422 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 TRAPPC8Q9Y2L5 1435 aa8.01□□□□□ -1.13
CNOT1-205ENST00000563283 NCOA2Q15596 1464 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 ABCC1P33527 1531 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 ITSN2Q9NZM3 1697 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 CELA2BP08218 269 aaPredicted RBP8□□□□□ -1.13
CNOT1-205ENST00000563283 MX2P20592 715 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 PHF24Q9UPV7 400 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 KIAA1024Q9UPX6 916 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 POGZQ7Z3K3 1410 aa8□□□□□ -1.13
CNOT1-205ENST00000563283 KDM5CP41229 1560 aa7.99□□□□□ -1.13
CNOT1-205ENST00000563283 EPHA4P54764 986 aa7.99□□□□□ -1.13
CNOT1-205ENST00000563283 CLDN10P78369 228 aa7.99□□□□□ -1.13
CNOT1-205ENST00000563283 FOXK2Q01167 660 aa7.99□□□□□ -1.13
CNOT1-205ENST00000563283 NBPF1Q3BBV0 1214 aa7.99□□□□□ -1.13
CNOT1-205ENST00000563283 ZDHHC3Q9NYG2 299 aa7.99□□□□□ -1.13
CNOT1-205ENST00000563283 SCHIP1Q9P0W5 487 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-205ENST00000563283 NSFL1CQ9UNZ2 370 aaKnown RBP7.99□□□□□ -1.13
CNOT1-205ENST00000563283 SUPT6HQ7KZ85 1726 aaKnown RBP7.98□□□□□ -1.13
CNOT1-205ENST00000563283 ZBTB7BO15156 539 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-205ENST00000563283 HNRNPMP52272 730 aaKnown RBP eCLIP7.98□□□□□ -1.13
CNOT1-205ENST00000563283 MAP3K10Q02779 954 aa7.98□□□□□ -1.13
CNOT1-205ENST00000563283 KCNMA1Q12791 1236 aa7.98□□□□□ -1.13
CNOT1-205ENST00000563283 TPCN2Q8NHX9 752 aa7.98□□□□□ -1.13
CNOT1-205ENST00000563283 NDFIP2Q9NV92 336 aa7.98□□□□□ -1.13
CNOT1-205ENST00000563283 DNAAF2Q9NVR5 837 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms