RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 NPHP1O15259 732 aa28.23■■■□□ 2.11
GGA2-204ENST00000563047 HTATSF1O43719 755 aaKnown RBP28.23■■■□□ 2.11
GGA2-204ENST00000563047 ST5P78524 1137 aa28.23■■■□□ 2.11
GGA2-204ENST00000563047 SRGNP10124 158 aa28.22■■■□□ 2.11
GGA2-204ENST00000563047 CLEC4GQ6UXB4 293 aa28.22■■■□□ 2.11
GGA2-204ENST00000563047 SLX4Q8IY92 1834 aa28.22■■■□□ 2.11
GGA2-204ENST00000563047 NBPF26B4DH59 902 aa28.21■■■□□ 2.11
GGA2-204ENST00000563047 STYK1Q6J9G0 422 aa28.21■■■□□ 2.11
GGA2-204ENST00000563047 NBPF10Q6P3W6 841 aaKnown RBP28.21■■■□□ 2.11
GGA2-204ENST00000563047 NBPF15Q8N660 670 aa28.21■■■□□ 2.11
GGA2-204ENST00000563047 KLRG1Q96E93 195 aa28.21■■■□□ 2.11
GGA2-204ENST00000563047 DICER1Q9UPY3 1922 aaKnown RBP28.2■■■□□ 2.11
GGA2-204ENST00000563047 POTECB2RU33 542 aa28.2■■■□□ 2.1
GGA2-204ENST00000563047 CNKSR1Q969H4 720 aa28.2■■■□□ 2.1
GGA2-204ENST00000563047 CACNA1SQ13698 1873 aa28.19■■■□□ 2.1
GGA2-204ENST00000563047 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
GGA2-204ENST00000563047 MASTLQ96GX5 879 aa28.19■■■□□ 2.1
GGA2-204ENST00000563047 LTBP3Q9NS15 1303 aa28.18■■■□□ 2.1
GGA2-204ENST00000563047 TAF7Q15545 349 aaPredicted RBP28.18■■■□□ 2.1
GGA2-204ENST00000563047 ERFEQ4G0M1 354 aa28.18■■■□□ 2.1
GGA2-204ENST00000563047 NBPF5PQ86XG9 351 aaPredicted RBP28.18■■■□□ 2.1
GGA2-204ENST00000563047 ZNF652Q9Y2D9 606 aa28.18■■■□□ 2.1
GGA2-204ENST00000563047 ARFGEF2Q9Y6D5 1785 aa28.18■■■□□ 2.1
GGA2-204ENST00000563047 DPY19L2Q6NUT2 758 aa28.17■■■□□ 2.1
GGA2-204ENST00000563047 MIS18AQ9NYP9 233 aa28.17■■■□□ 2.1
GGA2-204ENST00000563047 JMYQ8N9B5 988 aa28.16■■■□□ 2.1
GGA2-204ENST00000563047 TAOK3Q9H2K8 898 aa28.16■■■□□ 2.1
GGA2-204ENST00000563047 NIP7Q9Y221 180 aaKnown RBP eCLIP28.14■■■□□ 2.1
GGA2-204ENST00000563047 DLG5Q8TDM6 1919 aa28.14■■■□□ 2.09
GGA2-204ENST00000563047 RGL2O15211 777 aa28.13■■■□□ 2.09
GGA2-204ENST00000563047 C7orf43Q8WVR3 580 aa28.13■■■□□ 2.09
GGA2-204ENST00000563047 KLRG2A4D1S0 409 aaPredicted RBP28.12■■■□□ 2.09
GGA2-204ENST00000563047 SOGA3Q5TF21 947 aa28.12■■■□□ 2.09
GGA2-204ENST00000563047 LAMB4A4D0S4 1761 aa28.11■■■□□ 2.09
GGA2-204ENST00000563047 HLFQ16534 295 aa28.11■■■□□ 2.09
GGA2-204ENST00000563047 TPTE2Q6XPS3 522 aa28.11■■■□□ 2.09
GGA2-204ENST00000563047 PLEKHF1Q96S99 279 aa28.11■■■□□ 2.09
GGA2-204ENST00000563047 KDM3BQ7LBC6 1761 aa28.1■■■□□ 2.09
GGA2-204ENST00000563047 NPR1P16066 1061 aa28.1■■■□□ 2.09
GGA2-204ENST00000563047 FAM177BA6PVY3 158 aa28.09■■■□□ 2.09
GGA2-204ENST00000563047 DDNO94850 711 aaPredicted RBP28.08■■■□□ 2.09
GGA2-204ENST00000563047 NEFMP07197 916 aa28.08■■■□□ 2.09
GGA2-204ENST00000563047 CCDC93Q567U6 631 aa28.07■■■□□ 2.08
GGA2-204ENST00000563047 PNISRQ8TF01 805 aaKnown RBP28.07■■■□□ 2.08
GGA2-204ENST00000563047 EIF4A1P60842 406 aaKnown RBP28.06■■■□□ 2.08
GGA2-204ENST00000563047 THUMPD2Q9BTF0 503 aaKnown RBP28.06■■■□□ 2.08
GGA2-204ENST00000563047 NFE2L2Q16236 605 aa28.05■■■□□ 2.08
GGA2-204ENST00000563047 NGEFQ8N5V2 710 aa28.05■■■□□ 2.08
GGA2-204ENST00000563047 OLFM4Q6UX06 510 aa28.04■■■□□ 2.08
GGA2-204ENST00000563047 PCNTO95613 3336 aa28.03■■■□□ 2.08
GGA2-204ENST00000563047 ERVV-1B6SEH8 477 aa28.02■■■□□ 2.08
GGA2-204ENST00000563047 POTEIP0CG38 1075 aa28.02■■■□□ 2.08
GGA2-204ENST00000563047 POTEJP0CG39 1038 aa28.02■■■□□ 2.08
GGA2-204ENST00000563047 FKBP4Q02790 459 aaKnown RBP eCLIP28.02■■■□□ 2.08
GGA2-204ENST00000563047 RRP7AQ9Y3A4 280 aaKnown RBP28.02■■■□□ 2.08
GGA2-204ENST00000563047 NUP98P52948 1817 aa28.02■■■□□ 2.08
GGA2-204ENST00000563047 MAP3K15Q6ZN16 1313 aa28.01■■■□□ 2.07
GGA2-204ENST00000563047 GTF2E1P29083 439 aaPredicted RBP28.01■■■□□ 2.07
GGA2-204ENST00000563047 TTLL7Q6ZT98 887 aa28.01■■■□□ 2.07
GGA2-204ENST00000563047 ZNF277Q9NRM2 450 aaPredicted RBP28.01■■■□□ 2.07
GGA2-204ENST00000563047 ABCC12Q96J65 1359 aa28■■■□□ 2.07
GGA2-204ENST00000563047 CHADLQ6NUI6 762 aa28■■■□□ 2.07
GGA2-204ENST00000563047 ALDH1B1P30837 517 aa27.99■■■□□ 2.07
GGA2-204ENST00000563047 NUTM1Q86Y26 1132 aa27.99■■■□□ 2.07
GGA2-204ENST00000563047 L3MBTL3Q96JM7 780 aaPredicted RBP27.99■■■□□ 2.07
GGA2-204ENST00000563047 MYL6BP14649 208 aa27.98■■■□□ 2.07
GGA2-204ENST00000563047 CRY2Q49AN0 593 aa27.98■■■□□ 2.07
GGA2-204ENST00000563047 COL13A1Q5TAT6 717 aaPredicted RBP27.98■■■□□ 2.07
GGA2-204ENST00000563047 RTKN2Q8IZC4 609 aa27.98■■■□□ 2.07
GGA2-204ENST00000563047 NYXQ9GZU5 481 aa27.98■■■□□ 2.07
GGA2-204ENST00000563047 MAPK8IP3Q9UPT6 1336 aa27.97■■■□□ 2.07
GGA2-204ENST00000563047 PNNQ9H307 717 aaKnown RBP27.97■■■□□ 2.07
GGA2-204ENST00000563047 ZNF541Q9H0D2 1346 aa27.96■■■□□ 2.07
GGA2-204ENST00000563047 KIF6Q6ZMV9 814 aa27.96■■■□□ 2.07
GGA2-204ENST00000563047 UBN2Q6ZU65 1347 aa27.95■■■□□ 2.07
GGA2-204ENST00000563047 SCN4AP35499 1836 aa27.95■■■□□ 2.07
GGA2-204ENST00000563047 SNED1Q8TER0 1413 aa27.95■■■□□ 2.07
GGA2-204ENST00000563047 IQCA1LA6NCM1 817 aa27.95■■■□□ 2.06
GGA2-204ENST00000563047 ZBTB3Q9H5J0 574 aa27.95■■■□□ 2.06
GGA2-204ENST00000563047 GPTP24298 496 aa27.94■■■□□ 2.06
GGA2-204ENST00000563047 SYNE4Q8N205 404 aa27.94■■■□□ 2.06
GGA2-204ENST00000563047 TAF1DQ9H5J8 278 aaPredicted RBP27.94■■■□□ 2.06
GGA2-204ENST00000563047 SUSD4Q5VX71 490 aa27.93■■■□□ 2.06
GGA2-204ENST00000563047 IBTKQ9P2D0 1353 aaPredicted RBP27.93■■■□□ 2.06
GGA2-204ENST00000563047 IARSP41252 1262 aaKnown RBP27.92■■■□□ 2.06
GGA2-204ENST00000563047 ZNF34Q8IZ26 560 aa27.92■■■□□ 2.06
GGA2-204ENST00000563047 CREBZFQ9NS37 354 aa27.92■■■□□ 2.06
GGA2-204ENST00000563047 RIC1Q4ADV7 1423 aa27.92■■■□□ 2.06
GGA2-204ENST00000563047 ERBB4Q15303 1308 aa27.92■■■□□ 2.06
GGA2-204ENST00000563047 FZD9O00144 591 aa27.91■■■□□ 2.06
GGA2-204ENST00000563047 GIGYF2Q6Y7W6 1299 aaKnown RBP27.91■■■□□ 2.06
GGA2-204ENST00000563047 LDHDQ86WU2 507 aa27.91■■■□□ 2.06
GGA2-204ENST00000563047 TSPYL4Q9UJ04 414 aa27.91■■■□□ 2.06
GGA2-204ENST00000563047 HSPA1AP0DMV8 641 aaKnown RBP27.9■■■□□ 2.06
GGA2-204ENST00000563047 HSPA1BP0DMV9 641 aaKnown RBP27.9■■■□□ 2.06
GGA2-204ENST00000563047 LRP10Q7Z4F1 713 aa27.9■■■□□ 2.06
GGA2-204ENST00000563047 PSMD1Q99460 953 aa27.9■■■□□ 2.06
GGA2-204ENST00000563047 NTSR2O95665 410 aa27.89■■■□□ 2.06
GGA2-204ENST00000563047 HOXA10P31260 410 aaPredicted RBP27.89■■■□□ 2.06
GGA2-204ENST00000563047 RIPK4P57078 832 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms