RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PLCH1Q4KWH8 1693 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 OSBPL3Q9H4L5 887 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 LAMB4A4D0S4 1761 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 CDC45O75419 566 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 SDSP20132 328 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
LINC00838-201ENST00000562956 RAB11FIP3O75154 756 aa11.61□□□□□ -0.55
LINC00838-201ENST00000562956 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
LINC00838-201ENST00000562956 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
LINC00838-201ENST00000562956 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
LINC00838-201ENST00000562956 HDAC5Q9UQL6 1122 aa11.61□□□□□ -0.55
LINC00838-201ENST00000562956 MX1P20591 662 aa11.6□□□□□ -0.55
LINC00838-201ENST00000562956 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
LINC00838-201ENST00000562956 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
LINC00838-201ENST00000562956 THRAP3Q9Y2W1 955 aaKnown RBP11.6□□□□□ -0.55
LINC00838-201ENST00000562956 BCL9O00512 1426 aa11.6□□□□□ -0.55
LINC00838-201ENST00000562956 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
LINC00838-201ENST00000562956 SPATA31A5Q5VU36 1347 aa11.6□□□□□ -0.55
LINC00838-201ENST00000562956 SPATA31A7Q8IWB4 1347 aa11.6□□□□□ -0.55
LINC00838-201ENST00000562956 SYTL4Q96C24 671 aaPredicted RBP11.59□□□□□ -0.55
LINC00838-201ENST00000562956 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
LINC00838-201ENST00000562956 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
LINC00838-201ENST00000562956 PA2G4Q9UQ80 394 aaKnown RBP11.59□□□□□ -0.55
LINC00838-201ENST00000562956 EPHA10Q5JZY3 1008 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 KIF1BPQ96EK5 621 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
LINC00838-201ENST00000562956 SLIT2O94813 1529 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 DDB1Q16531 1140 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 STAP2Q9UGK3 403 aa11.59□□□□□ -0.55
LINC00838-201ENST00000562956 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
LINC00838-201ENST00000562956 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
LINC00838-201ENST00000562956 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
LINC00838-201ENST00000562956 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
LINC00838-201ENST00000562956 CCDC9Q9Y3X0 531 aaKnown RBP11.58□□□□□ -0.56
LINC00838-201ENST00000562956 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
LINC00838-201ENST00000562956 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
LINC00838-201ENST00000562956 UBE3BQ7Z3V4 1068 aa11.58□□□□□ -0.56
LINC00838-201ENST00000562956 LRP6O75581 1613 aa11.57□□□□□ -0.56
LINC00838-201ENST00000562956 A0A087WZG4 1122 aa11.57□□□□□ -0.56
LINC00838-201ENST00000562956 OS9Q13438 667 aaPredicted RBP11.57□□□□□ -0.56
LINC00838-201ENST00000562956 ARFGEF2Q9Y6D5 1785 aa11.57□□□□□ -0.56
LINC00838-201ENST00000562956 WNK3Q9BYP7 1800 aa11.57□□□□□ -0.56
LINC00838-201ENST00000562956 MARCH10Q8NA82 808 aaPredicted RBP11.57□□□□□ -0.56
LINC00838-201ENST00000562956 TEX13AQ9BXU3 409 aaPredicted RBP11.57□□□□□ -0.56
LINC00838-201ENST00000562956 CASP7P55210 303 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 ZNF330Q9Y3S2 320 aaPredicted RBP11.56□□□□□ -0.56
LINC00838-201ENST00000562956 BARGINQ6ZT62 677 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 KLHDC4Q8TBB5 520 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 C8orf37Q96NL8 207 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 ITGB4P16144 1822 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 STARD3NLO95772 234 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 UNC5CLQ8IV45 518 aa11.56□□□□□ -0.56
LINC00838-201ENST00000562956 AOX1Q06278 1338 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 BECN1Q14457 450 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 TBC1D2Q9BYX2 928 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.55□□□□□ -0.56
LINC00838-201ENST00000562956 JCADQ9P266 1359 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 CASC1Q6TDU7 716 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 PI4K2BQ8TCG2 481 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 KIF2CQ99661 725 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 SIL1Q9H173 461 aa11.55□□□□□ -0.56
LINC00838-201ENST00000562956 H7C1W4 665 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 SASH1O94885 1247 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
LINC00838-201ENST00000562956 RABL6Q3YEC7 729 aaPredicted RBP11.54□□□□□ -0.56
LINC00838-201ENST00000562956 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
LINC00838-201ENST00000562956 COL15A1P39059 1388 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 A0A0G2JS52 829 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 TRIM6-TRIM34B2RNG4 842 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 ERC1Q8IUD2 1116 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 RILPL2Q969X0 211 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 NWD2Q9ULI1 1742 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 BCL9LQ86UU0 1499 aa11.54□□□□□ -0.56
LINC00838-201ENST00000562956 NUP188Q5SRE5 1749 aa11.53□□□□□ -0.56
LINC00838-201ENST00000562956 G3BP1Q13283 466 aaKnown RBP eCLIP11.53□□□□□ -0.56
LINC00838-201ENST00000562956 FAM98CQ17RN3 349 aaKnown RBP11.53□□□□□ -0.56
LINC00838-201ENST00000562956 CLASRPQ8N2M8 674 aaKnown RBP11.53□□□□□ -0.56
LINC00838-201ENST00000562956 RFX5P48382 616 aaPredicted RBP11.53□□□□□ -0.56
LINC00838-201ENST00000562956 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
LINC00838-201ENST00000562956 DOT1LQ8TEK3 1739 aa11.53□□□□□ -0.56
LINC00838-201ENST00000562956 MAP4K4O95819 1239 aaPredicted RBP11.53□□□□□ -0.56
LINC00838-201ENST00000562956 FOXO4P98177 505 aa11.53□□□□□ -0.56
LINC00838-201ENST00000562956 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
LINC00838-201ENST00000562956 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.56
LINC00838-201ENST00000562956 PTPN12Q05209 780 aaKnown RBP11.52□□□□□ -0.57
LINC00838-201ENST00000562956 TCIRG1Q13488 830 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 VPS72Q15906 364 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 ARXQ96QS3 562 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 ZBTB1Q9Y2K1 713 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 AFDNP55196 1824 aaKnown RBP11.52□□□□□ -0.57
LINC00838-201ENST00000562956 LMBR1LQ6UX01 489 aa11.52□□□□□ -0.57
LINC00838-201ENST00000562956 KIF6Q6ZMV9 814 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms