RNA–Protein interactions for RNA: ENST00000562953.5

POLR2C-203, Transcript of RNA polymerase II subunit C, humanhuman

TSL 2

Gene POLR2C, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-203ENST00000562953 MRC1P22897 1456 aa16.98■□□□□ 0.31
POLR2C-203ENST00000562953 SCN4AP35499 1836 aa16.98■□□□□ 0.31
POLR2C-203ENST00000562953 WDR33Q9C0J8 1336 aaKnown RBP16.97■□□□□ 0.31
POLR2C-203ENST00000562953 ANKRD31Q8N7Z5 1873 aa16.97■□□□□ 0.31
POLR2C-203ENST00000562953 EPHX2P34913 555 aa16.97■□□□□ 0.31
POLR2C-203ENST00000562953 MLLT1Q03111 559 aaPredicted RBP16.97■□□□□ 0.31
POLR2C-203ENST00000562953 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
POLR2C-203ENST00000562953 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
POLR2C-203ENST00000562953 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
POLR2C-203ENST00000562953 C7orf43Q8WVR3 580 aa16.97■□□□□ 0.31
POLR2C-203ENST00000562953 CLSPNQ9HAW4 1339 aa16.96■□□□□ 0.31
POLR2C-203ENST00000562953 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.31
POLR2C-203ENST00000562953 HMOX1P09601 288 aa16.95■□□□□ 0.3
POLR2C-203ENST00000562953 RGS19P49795 217 aa16.95■□□□□ 0.3
POLR2C-203ENST00000562953 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
POLR2C-203ENST00000562953 ZNF496Q96IT1 587 aaPredicted RBP16.95■□□□□ 0.3
POLR2C-203ENST00000562953 BEGAINQ9BUH8 593 aa16.95■□□□□ 0.3
POLR2C-203ENST00000562953 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
POLR2C-203ENST00000562953 SLX4Q8IY92 1834 aa16.95■□□□□ 0.3
POLR2C-203ENST00000562953 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
POLR2C-203ENST00000562953 NPR1P16066 1061 aa16.94■□□□□ 0.3
POLR2C-203ENST00000562953 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
POLR2C-203ENST00000562953 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
POLR2C-203ENST00000562953 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
POLR2C-203ENST00000562953 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
POLR2C-203ENST00000562953 CAMTA2O94983 1202 aa16.93■□□□□ 0.3
POLR2C-203ENST00000562953 TEFQ10587 303 aa16.93■□□□□ 0.3
POLR2C-203ENST00000562953 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
POLR2C-203ENST00000562953 HEG1Q9ULI3 1381 aa16.92■□□□□ 0.3
POLR2C-203ENST00000562953 ECE1P42892 770 aa16.92■□□□□ 0.3
POLR2C-203ENST00000562953 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
POLR2C-203ENST00000562953 NBPF5PQ86XG9 351 aaPredicted RBP16.92■□□□□ 0.3
POLR2C-203ENST00000562953 ZNF277Q9NRM2 450 aaPredicted RBP16.92■□□□□ 0.3
POLR2C-203ENST00000562953 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
POLR2C-203ENST00000562953 ZNF541Q9H0D2 1346 aa16.92■□□□□ 0.3
POLR2C-203ENST00000562953 FZD9O00144 591 aa16.91■□□□□ 0.3
POLR2C-203ENST00000562953 A1BGP04217 495 aa16.91■□□□□ 0.3
POLR2C-203ENST00000562953 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
POLR2C-203ENST00000562953 DZIP3Q86Y13 1208 aaKnown RBP16.91■□□□□ 0.3
POLR2C-203ENST00000562953 GPC2Q8N158 579 aa16.91■□□□□ 0.3
POLR2C-203ENST00000562953 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
POLR2C-203ENST00000562953 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
POLR2C-203ENST00000562953 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
POLR2C-203ENST00000562953 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
POLR2C-203ENST00000562953 TPTE2Q6XPS3 522 aa16.9■□□□□ 0.3
POLR2C-203ENST00000562953 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
POLR2C-203ENST00000562953 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.3
POLR2C-203ENST00000562953 ALDH1B1P30837 517 aa16.89■□□□□ 0.29
POLR2C-203ENST00000562953 IARSP41252 1262 aaKnown RBP16.89■□□□□ 0.29
POLR2C-203ENST00000562953 JDP2Q8WYK2 163 aa16.89■□□□□ 0.29
POLR2C-203ENST00000562953 CAPNS2Q96L46 248 aa16.89■□□□□ 0.29
POLR2C-203ENST00000562953 GPR101Q96P66 508 aaPredicted RBP16.89■□□□□ 0.29
POLR2C-203ENST00000562953 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
POLR2C-203ENST00000562953 DIAPH1O60610 1272 aaKnown RBP16.88■□□□□ 0.29
POLR2C-203ENST00000562953 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
POLR2C-203ENST00000562953 IL17REQ8NFR9 667 aa16.88■□□□□ 0.29
POLR2C-203ENST00000562953 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
POLR2C-203ENST00000562953 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
POLR2C-203ENST00000562953 LMOD1P29536 600 aaPredicted RBP16.87■□□□□ 0.29
POLR2C-203ENST00000562953 PAXIP1Q6ZW49 1069 aaPredicted RBP16.87■□□□□ 0.29
POLR2C-203ENST00000562953 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
POLR2C-203ENST00000562953 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
POLR2C-203ENST00000562953 MAP2K2P36507 400 aa16.86■□□□□ 0.29
POLR2C-203ENST00000562953 EIF6P56537 245 aaKnown RBP16.86■□□□□ 0.29
POLR2C-203ENST00000562953 CACNA1SQ13698 1873 aa16.86■□□□□ 0.29
POLR2C-203ENST00000562953 GRM1Q13255 1194 aa16.85■□□□□ 0.29
POLR2C-203ENST00000562953 OLFM4Q6UX06 510 aa16.85■□□□□ 0.29
POLR2C-203ENST00000562953 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
POLR2C-203ENST00000562953 PSMD1Q99460 953 aa16.85■□□□□ 0.29
POLR2C-203ENST00000562953 RGL2O15211 777 aa16.84■□□□□ 0.29
POLR2C-203ENST00000562953 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
POLR2C-203ENST00000562953 CC2D2BQ6DHV5 1058 aa16.84■□□□□ 0.29
POLR2C-203ENST00000562953 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
POLR2C-203ENST00000562953 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
POLR2C-203ENST00000562953 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
POLR2C-203ENST00000562953 CA12O43570 354 aa16.83■□□□□ 0.28
POLR2C-203ENST00000562953 GTF2E1P29083 439 aaPredicted RBP16.83■□□□□ 0.28
POLR2C-203ENST00000562953 USP50Q70EL3 339 aaPredicted RBP16.83■□□□□ 0.28
POLR2C-203ENST00000562953 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
POLR2C-203ENST00000562953 NIP7Q9Y221 180 aaKnown RBP eCLIP16.83■□□□□ 0.28
POLR2C-203ENST00000562953 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
POLR2C-203ENST00000562953 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
POLR2C-203ENST00000562953 CST9Q5W186 159 aa16.82■□□□□ 0.28
POLR2C-203ENST00000562953 TLL2Q9Y6L7 1015 aa16.82■□□□□ 0.28
POLR2C-203ENST00000562953 EPS15P42566 896 aa16.81■□□□□ 0.28
POLR2C-203ENST00000562953 PIP4K2AP48426 406 aaPredicted RBP16.8■□□□□ 0.28
POLR2C-203ENST00000562953 FMR1Q06787 632 aaKnown RBP eCLIP16.8■□□□□ 0.28
POLR2C-203ENST00000562953 MCOLN1Q9GZU1 580 aa16.8■□□□□ 0.28
POLR2C-203ENST00000562953 FAM177BA6PVY3 158 aa16.79■□□□□ 0.28
POLR2C-203ENST00000562953 KCNQ3O43525 872 aa16.79■□□□□ 0.28
POLR2C-203ENST00000562953 SNRPA1P09661 255 aaKnown RBP16.79■□□□□ 0.28
POLR2C-203ENST00000562953 SCNN1DP51172 638 aa16.79■□□□□ 0.28
POLR2C-203ENST00000562953 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
POLR2C-203ENST00000562953 TRAF5O00463 557 aa16.78■□□□□ 0.28
POLR2C-203ENST00000562953 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
POLR2C-203ENST00000562953 AOC2O75106 756 aa16.78■□□□□ 0.28
POLR2C-203ENST00000562953 LARGE2Q8N3Y3 721 aa16.78■□□□□ 0.28
POLR2C-203ENST00000562953 HHIPL1Q96JK4 782 aa16.78■□□□□ 0.28
POLR2C-203ENST00000562953 THSD7BQ9C0I4 1608 aa16.78■□□□□ 0.28
POLR2C-203ENST00000562953 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms