RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 PPP4R3CPQ6ZMV5 832 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 C1orf131Q8NDD1 294 aaKnown RBP11.01□□□□□ -0.65
CDH1-205ENST00000562836 FAM53CQ9NYF3 392 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 TMEM98Q9Y2Y6 226 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 MAPKBP1O60336 1514 aa11.01□□□□□ -0.65
CDH1-205ENST00000562836 F8VZ95 297 aa11□□□□□ -0.65
CDH1-205ENST00000562836 MMEP08473 750 aa11□□□□□ -0.65
CDH1-205ENST00000562836 SAMD3Q8N6K7 520 aa11□□□□□ -0.65
CDH1-205ENST00000562836 SLC7A5P2Q9GIP4 190 aa11□□□□□ -0.65
CDH1-205ENST00000562836 KIF9Q9HAQ2 790 aa11□□□□□ -0.65
CDH1-205ENST00000562836 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
CDH1-205ENST00000562836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11□□□□□ -0.65
CDH1-205ENST00000562836 CCDC47Q96A33 483 aaKnown RBP11□□□□□ -0.65
CDH1-205ENST00000562836 MAPK8IP1Q9UQF2 711 aa11□□□□□ -0.65
CDH1-205ENST00000562836 TPPPO94811 219 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 GCFC2P16383 781 aaKnown RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 SESN3P58005 492 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 LRRC31Q6UY01 552 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 GBP6Q6ZN66 633 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 MPP3Q13368 585 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 FKBP5Q13451 457 aaPredicted RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 ENOX1Q8TC92 643 aaKnown RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 TRIM7Q9C029 511 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 GCKP35557 465 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 MCCD1P59942 119 aaPredicted RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 TEX35Q5T0J7 233 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 SOGA3Q5TF21 947 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 CWC27Q6UX04 472 aaKnown RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 CTCFLQ8NI51 663 aaPredicted RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 N4BP2L2Q92802 583 aaPredicted RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
CDH1-205ENST00000562836 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
CDH1-205ENST00000562836 EIF3CLB5ME19 914 aaKnown RBP10.98□□□□□ -0.65
CDH1-205ENST00000562836 PARNO95453 639 aaKnown RBP10.98□□□□□ -0.65
CDH1-205ENST00000562836 RAB27AP51159 221 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 ICA1Q05084 483 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 SKOR2Q2VWA4 1001 aaPredicted RBP10.98□□□□□ -0.65
CDH1-205ENST00000562836 NBPF8Q3BBV2 869 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 GIMAP6Q6P9H5 292 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 USP33Q8TEY7 942 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 EIF3CQ99613 913 aaKnown RBP10.98□□□□□ -0.65
CDH1-205ENST00000562836 LRRC10BA6NIK2 292 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 TMEM62Q0P6H9 643 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 CPLX2Q6PUV4 134 aaKnown RBP10.98□□□□□ -0.65
CDH1-205ENST00000562836 SPATA21Q7Z572 469 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
CDH1-205ENST00000562836 RBM17Q96I25 401 aaKnown RBP10.98□□□□□ -0.65
CDH1-205ENST00000562836 RAB3GAP2Q9H2M9 1393 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 MAP3K1Q13233 1512 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
CDH1-205ENST00000562836 IL4RP24394 825 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 CHMLP26374 656 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 MYO1HQ8N1T3 1032 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 SLC43A3Q8NBI5 491 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
CDH1-205ENST00000562836 MAP3K20Q9NYL2 800 aaKnown RBP10.97□□□□□ -0.65
CDH1-205ENST00000562836 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
CDH1-205ENST00000562836 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 PRPHP41219 470 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 NSUN2Q08J23 767 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDH1-205ENST00000562836 IQCB1Q15051 598 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 CCDC30Q5VVM6 783 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 ANKRD18AQ8IVF6 992 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 EZH1Q92800 747 aaPredicted RBP10.97□□□□□ -0.65
CDH1-205ENST00000562836 KCNN1Q92952 543 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 GTF3C6Q969F1 213 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 GPATCH3Q96I76 525 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 TACO1Q9BSH4 297 aaKnown RBP10.97□□□□□ -0.65
CDH1-205ENST00000562836 TBC1D2Q9BYX2 928 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 RBSNQ9H1K0 784 aa10.97□□□□□ -0.65
CDH1-205ENST00000562836 USP19O94966 1318 aa10.96□□□□□ -0.65
CDH1-205ENST00000562836 RGL2O15211 777 aa10.96□□□□□ -0.65
CDH1-205ENST00000562836 PKN1Q16512 942 aa10.96□□□□□ -0.65
CDH1-205ENST00000562836 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
CDH1-205ENST00000562836 TRAK1Q9UPV9 953 aa10.96□□□□□ -0.65
CDH1-205ENST00000562836 HMMRO75330 724 aa10.96□□□□□ -0.66
CDH1-205ENST00000562836 HOXA10P31260 410 aaPredicted RBP10.96□□□□□ -0.66
CDH1-205ENST00000562836 ANKRD45Q5TZF3 282 aa10.96□□□□□ -0.66
CDH1-205ENST00000562836 CHMP7Q8WUX9 453 aaPredicted RBP10.96□□□□□ -0.66
CDH1-205ENST00000562836 GBP4Q96PP9 640 aa10.96□□□□□ -0.66
CDH1-205ENST00000562836 TSGA10Q9BZW7 698 aa10.96□□□□□ -0.66
CDH1-205ENST00000562836 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.66
CDH1-205ENST00000562836 DYTNA2CJ06 578 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 ST5P78524 1137 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 HDLBPQ00341 1268 aaKnown RBP10.95□□□□□ -0.66
CDH1-205ENST00000562836 SMARCE1Q969G3 411 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 JPH2Q9BR39 696 aaPredicted RBP10.95□□□□□ -0.66
CDH1-205ENST00000562836 RSPH9Q9H1X1 276 aaPredicted RBP10.95□□□□□ -0.66
CDH1-205ENST00000562836 POLR3GO15318 223 aaPredicted RBP10.95□□□□□ -0.66
CDH1-205ENST00000562836 SYCP1Q15431 976 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
CDH1-205ENST00000562836 GINM1Q9NU53 330 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
CDH1-205ENST00000562836 TRIM64CA6NLI5 447 aa10.94□□□□□ -0.66
CDH1-205ENST00000562836 EIF3FO00303 357 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms