RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 HCLS1P14317 486 aaPredicted RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 PLEKHF1Q96S99 279 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 CHL1O00533 1208 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 VAMP4O75379 141 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 TTLL7Q6ZT98 887 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 LNPKQ9C0E8 428 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 PALLDQ8WX93 1383 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 HMGN5P82970 282 aaKnown RBP8.25□□□□□ -1.09
LINC02249-202ENST00000562624 EZH2Q15910 746 aaKnown RBP8.25□□□□□ -1.09
LINC02249-202ENST00000562624 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 RILPL2Q969X0 211 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 ANKIB1Q9P2G1 1089 aa8.25□□□□□ -1.09
LINC02249-202ENST00000562624 SRP68Q9UHB9 627 aaKnown RBP8.25□□□□□ -1.09
LINC02249-202ENST00000562624 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
LINC02249-202ENST00000562624 FNBP4Q8N3X1 1017 aaPredicted RBP8.25□□□□□ -1.09
LINC02249-202ENST00000562624 GNAI2P04899 355 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 TRIM27P14373 513 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 PROSER3Q2NL68 480 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 IL1RAPL2Q9NP60 686 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 IFIT2P09913 472 aaKnown RBP8.24□□□□□ -1.09
LINC02249-202ENST00000562624 MCM4P33991 863 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 ZSCAN30Q86W11 494 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 NAP1L2Q9ULW6 460 aaPredicted RBP8.24□□□□□ -1.09
LINC02249-202ENST00000562624 EXOC6BQ9Y2D4 811 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 POLR1AO95602 1720 aaPredicted RBP8.24□□□□□ -1.09
LINC02249-202ENST00000562624 CCT4P50991 539 aaKnown RBP8.24□□□□□ -1.09
LINC02249-202ENST00000562624 TPTE2Q6XPS3 522 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
LINC02249-202ENST00000562624 CWC25Q9NXE8 425 aaPredicted RBP8.24□□□□□ -1.09
LINC02249-202ENST00000562624 PPP1R42Q7Z4L9 355 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 DDX21Q9NR30 783 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC02249-202ENST00000562624 CCDC39Q9UFE4 941 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
LINC02249-202ENST00000562624 ZNF142P52746 1687 aaPredicted RBP8.23□□□□□ -1.09
LINC02249-202ENST00000562624 UQCRHLA0A096LP55 91 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 UQCRHP07919 91 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 HSP90AB3PQ58FF7 597 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 CD163L1Q9NR16 1453 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
LINC02249-202ENST00000562624 CNBD1Q8NA66 436 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 NLRP3Q96P20 1036 aa8.23□□□□□ -1.09
LINC02249-202ENST00000562624 HSP90B1P14625 803 aaKnown RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 ST5P78524 1137 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 HELBQ8NG08 1087 aaPredicted RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 NRXN3Q9Y4C0 1643 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 IFIT5Q13325 482 aaKnown RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 CCDC27Q2M243 656 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 DIAPH3Q9NSV4 1193 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 IQSEC3Q9UPP2 1182 aaPredicted RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 CDK12Q9NYV4 1490 aaPredicted RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 KIAA1210Q9ULL0 1709 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
LINC02249-202ENST00000562624 KSR2Q6VAB6 950 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 BARGINQ6ZT62 677 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 MEIS3Q99687 375 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 TOMM22Q9NS69 142 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 KIF24Q5T7B8 1368 aa8.22□□□□□ -1.09
LINC02249-202ENST00000562624 LDHAL6AQ6ZMR3 332 aa8.21□□□□□ -1.09
LINC02249-202ENST00000562624 FGD1P98174 961 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 ZRSR1Q15695 479 aaKnown RBP8.21□□□□□ -1.1
LINC02249-202ENST00000562624 METTL24Q5JXM2 366 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
LINC02249-202ENST00000562624 GPATCH3Q96I76 525 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 DNAJC2Q99543 621 aaKnown RBP8.21□□□□□ -1.1
LINC02249-202ENST00000562624 UTP14AQ9BVJ6 771 aaKnown RBP8.21□□□□□ -1.1
LINC02249-202ENST00000562624 FOXD4L1Q9NU39 408 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 CPDO75976 1380 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 RGPD8O14715 1765 aaPredicted RBP8.21□□□□□ -1.1
LINC02249-202ENST00000562624 IL16Q14005 1332 aa8.21□□□□□ -1.1
LINC02249-202ENST00000562624 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 BCS1LQ9Y276 419 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 CHD2O14647 1828 aaKnown RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 RBM5P52756 815 aaKnown RBP eCLIP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 MVPQ14764 893 aaKnown RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 GPR162Q16538 588 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 CLASRPQ8N2M8 674 aaKnown RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 IQSEC2Q5JU85 1478 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 CT47B1P0C2W7 299 aaPredicted RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 ABCF2Q9UG63 623 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 JAG2Q9Y219 1238 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 ROBO1Q9Y6N7 1651 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 MAP4K4O95819 1239 aaPredicted RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 MMP10P09238 476 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 C22orf23Q9BZE7 217 aa8.2□□□□□ -1.1
LINC02249-202ENST00000562624 ZHX1Q9UKY1 873 aaPredicted RBP8.2□□□□□ -1.1
LINC02249-202ENST00000562624 RAD21O60216 631 aa8.19□□□□□ -1.1
LINC02249-202ENST00000562624 APPP05067 770 aa8.19□□□□□ -1.1
LINC02249-202ENST00000562624 FKBP4Q02790 459 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC02249-202ENST00000562624 ALDH1L2Q3SY69 923 aa8.19□□□□□ -1.1
LINC02249-202ENST00000562624 KLHDC4Q8TBB5 520 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms