RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 RTL1A6NKG5 1358 aa9.22□□□□□ -0.93
CFDP1-202ENST00000562602 GNAI3P08754 354 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 MCM2P49736 904 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 MLECQ14165 292 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 RRS1Q15050 365 aaKnown RBP9.21□□□□□ -0.94
CFDP1-202ENST00000562602 PLEKHM2Q8IWE5 1019 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 SIRT2Q8IXJ6 389 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 TATDN2Q93075 761 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 THUMPD2Q9BTF0 503 aaKnown RBP9.21□□□□□ -0.94
CFDP1-202ENST00000562602 STK31Q9BXU1 1019 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
CFDP1-202ENST00000562602 FLT4P35916 1363 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 ROBO2Q9HCK4 1378 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 ADAMTS13Q76LX8 1427 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 PTPRUQ92729 1446 aa9.21□□□□□ -0.94
CFDP1-202ENST00000562602 ELL2O00472 640 aaPredicted RBP9.2□□□□□ -0.94
CFDP1-202ENST00000562602 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 CEP85Q6P2H3 762 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 SRCIN1Q9C0H9 1055 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 ANKARQ7Z5J8 1434 aa9.2□□□□□ -0.94
CFDP1-202ENST00000562602 RGS20O76081 388 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 MCCP23508 829 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
CFDP1-202ENST00000562602 CCDC30Q5VVM6 783 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 KDRP35968 1356 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 IBTKQ9P2D0 1353 aaPredicted RBP9.19□□□□□ -0.94
CFDP1-202ENST00000562602 CRB1P82279 1406 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 SSH2Q76I76 1423 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 DIP2AQ14689 1571 aa9.19□□□□□ -0.94
CFDP1-202ENST00000562602 ERC2O15083 957 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 GNAI2P04899 355 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 THEMISQ8N1K5 641 aaPredicted RBP9.18□□□□□ -0.94
CFDP1-202ENST00000562602 ANP32BQ92688 251 aaKnown RBP9.18□□□□□ -0.94
CFDP1-202ENST00000562602 TNPO1Q92973 898 aaKnown RBP9.18□□□□□ -0.94
CFDP1-202ENST00000562602 KIF2CQ99661 725 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 USP26Q9BXU7 913 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 C1orf115Q9H7X2 142 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 HDAC5Q9UQL6 1122 aa9.18□□□□□ -0.94
CFDP1-202ENST00000562602 TOPAZ1Q8N9V7 1692 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 SLIT1O75093 1534 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 AOX1Q06278 1338 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 IGSF1Q8N6C5 1336 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 FBLN1P23142 703 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 AMPHP49418 695 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 ANAPC15P60006 121 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 ARHGEF1Q92888 912 aaKnown RBP9.17□□□□□ -0.94
CFDP1-202ENST00000562602 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 UBR1Q8IWV7 1749 aa9.17□□□□□ -0.94
CFDP1-202ENST00000562602 ARHGAP23Q9P227 1491 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 RGS12O14924 1447 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 ATP10DQ9P241 1426 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 FAM83GA6ND36 823 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 GNAT3A8MTJ3 354 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 HOXB7P09629 217 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 XRCC6P12956 609 aaKnown RBP eCLIP9.16□□□□□ -0.94
CFDP1-202ENST00000562602 KLHL40Q2TBA0 621 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 NGDNQ8NEJ9 315 aaKnown RBP9.16□□□□□ -0.94
CFDP1-202ENST00000562602 GRPEL1Q9HAV7 217 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
CFDP1-202ENST00000562602 NALCNQ8IZF0 1738 aa9.16□□□□□ -0.94
CFDP1-202ENST00000562602 MAP3K19Q56UN5 1328 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 RGPD1P0DJD0 1748 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 RAB11FIP3O75154 756 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 GSPT1P15170 499 aaKnown RBP9.15□□□□□ -0.94
CFDP1-202ENST00000562602 DCTN1Q14203 1278 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 HSP90AB2PQ58FF8 381 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 MCM10Q7L590 875 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 AMOTL2Q9Y2J4 779 aa9.15□□□□□ -0.94
CFDP1-202ENST00000562602 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.95
CFDP1-202ENST00000562602 LMTK3Q96Q04 1460 aa9.15□□□□□ -0.95
CFDP1-202ENST00000562602 SDSP20132 328 aa9.14□□□□□ -0.95
CFDP1-202ENST00000562602 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
CFDP1-202ENST00000562602 MTHFSDQ2M296 383 aaKnown RBP9.14□□□□□ -0.95
CFDP1-202ENST00000562602 HSP90AB4PQ58FF6 505 aa9.14□□□□□ -0.95
CFDP1-202ENST00000562602 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
CFDP1-202ENST00000562602 TRIM44Q96DX7 344 aaPredicted RBP9.14□□□□□ -0.95
CFDP1-202ENST00000562602 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
CFDP1-202ENST00000562602 LRRCC1Q9C099 1032 aa9.14□□□□□ -0.95
CFDP1-202ENST00000562602 RIMS1Q86UR5 1692 aaKnown RBP9.13□□□□□ -0.95
CFDP1-202ENST00000562602 MSH6P52701 1360 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 DLG5Q8TDM6 1919 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 LTKP29376 864 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 PDE1AP54750 535 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 PPP4CP60510 307 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 KCNC4Q03721 635 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 TAF7Q15545 349 aaPredicted RBP9.13□□□□□ -0.95
CFDP1-202ENST00000562602 TJAP1Q5JTD0 557 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 FBXO41Q8TF61 875 aa9.13□□□□□ -0.95
CFDP1-202ENST00000562602 STAP2Q9UGK3 403 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms