RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 ARFGEF1Q9Y6D6 1849 aa9.84□□□□□ -0.83
CNEP1R1-204ENST00000562576 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
CNEP1R1-204ENST00000562576 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
CNEP1R1-204ENST00000562576 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
CNEP1R1-204ENST00000562576 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
CNEP1R1-204ENST00000562576 PARP3Q9Y6F1 533 aa9.83□□□□□ -0.84
CNEP1R1-204ENST00000562576 CNTNAP1P78357 1384 aa9.83□□□□□ -0.84
CNEP1R1-204ENST00000562576 TATP17735 454 aaPredicted RBP9.82□□□□□ -0.84
CNEP1R1-204ENST00000562576 HSP90AB2PQ58FF8 381 aa9.82□□□□□ -0.84
CNEP1R1-204ENST00000562576 RAPGEF4Q8WZA2 1011 aa9.82□□□□□ -0.84
CNEP1R1-204ENST00000562576 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
CNEP1R1-204ENST00000562576 RGL2O15211 777 aa9.81□□□□□ -0.84
CNEP1R1-204ENST00000562576 NUDT7P0C024 238 aa9.81□□□□□ -0.84
CNEP1R1-204ENST00000562576 PCDHGA4Q9Y5G9 962 aa9.81□□□□□ -0.84
CNEP1R1-204ENST00000562576 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 NFKBIEO00221 500 aa9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 AIDAQ96BJ3 306 aa9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 TSKSQ9UJT2 592 aa9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 RTCBQ9Y3I0 505 aaKnown RBP9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 PCDH11XQ9BZA7 1347 aa9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 PCDH11YQ9BZA8 1340 aa9.8□□□□□ -0.84
CNEP1R1-204ENST00000562576 LMNB1P20700 586 aa9.79□□□□□ -0.84
CNEP1R1-204ENST00000562576 L3MBTL2Q969R5 705 aa9.79□□□□□ -0.84
CNEP1R1-204ENST00000562576 PASKQ96RG2 1323 aa9.79□□□□□ -0.84
CNEP1R1-204ENST00000562576 DDNO94850 711 aaPredicted RBP9.78□□□□□ -0.84
CNEP1R1-204ENST00000562576 RFC4P35249 363 aa9.78□□□□□ -0.84
CNEP1R1-204ENST00000562576 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
CNEP1R1-204ENST00000562576 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
CNEP1R1-204ENST00000562576 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
CNEP1R1-204ENST00000562576 EDC4Q6P2E9 1401 aaKnown RBP9.78□□□□□ -0.84
CNEP1R1-204ENST00000562576 CCDC88AQ3V6T2 1871 aa9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 RPS6KA4O75676 772 aa9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 ITGBL1O95965 494 aaPredicted RBP9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 TMOD3Q9NYL9 352 aa9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
CNEP1R1-204ENST00000562576 TM4SF1P30408 202 aa9.76□□□□□ -0.85
CNEP1R1-204ENST00000562576 COG3Q96JB2 828 aa9.76□□□□□ -0.85
CNEP1R1-204ENST00000562576 GGNBP2Q9H3C7 697 aa9.76□□□□□ -0.85
CNEP1R1-204ENST00000562576 VIRMAQ69YN4 1812 aaKnown RBP9.76□□□□□ -0.85
CNEP1R1-204ENST00000562576 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
CNEP1R1-204ENST00000562576 KDRP35968 1356 aa9.75□□□□□ -0.85
CNEP1R1-204ENST00000562576 MYH14Q7Z406 1995 aaKnown RBP9.75□□□□□ -0.85
CNEP1R1-204ENST00000562576 TIAM2Q8IVF5 1701 aa9.75□□□□□ -0.85
CNEP1R1-204ENST00000562576 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
CNEP1R1-204ENST00000562576 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
CNEP1R1-204ENST00000562576 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
CNEP1R1-204ENST00000562576 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
CNEP1R1-204ENST00000562576 PHKG2P15735 406 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 DEFB115Q30KQ5 88 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 USPL1Q5W0Q7 1092 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 SIN3AQ96ST3 1273 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 MCOLN1Q9GZU1 580 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 CNTNAP4Q9C0A0 1308 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
CNEP1R1-204ENST00000562576 FYB1O15117 783 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 C21orf2O43822 256 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 HMGB2P26583 209 aaKnown RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 CRKLP46109 303 aaKnown RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 GRM1Q13255 1194 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 MAP1SQ66K74 1059 aaPredicted RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 INTS5Q6P9B9 1019 aaKnown RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 C2CD5Q86YS7 1000 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 PTCD2Q8WV60 388 aaKnown RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 TAF1DQ9H5J8 278 aaPredicted RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 ROCK2O75116 1388 aaKnown RBP9.72□□□□□ -0.85
CNEP1R1-204ENST00000562576 ARHGAP33O14559 1287 aa9.71□□□□□ -0.86
CNEP1R1-204ENST00000562576 PPP1R37O75864 691 aa9.71□□□□□ -0.86
CNEP1R1-204ENST00000562576 FOXK1P85037 733 aa9.71□□□□□ -0.86
CNEP1R1-204ENST00000562576 NFIXQ14938 502 aa9.71□□□□□ -0.86
CNEP1R1-204ENST00000562576 TTLL6Q8N841 843 aa9.71□□□□□ -0.86
CNEP1R1-204ENST00000562576 INSRP06213 1382 aa9.71□□□□□ -0.86
CNEP1R1-204ENST00000562576 PDE4DIPQ5VU43 2346 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 RASSF10A6NK89 507 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 TBC1D12O60347 775 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 AOC2O75106 756 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 CYP4F22Q6NT55 531 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 EYA1Q99502 592 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 BCL2L12Q9HB09 334 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 SPG7Q9UQ90 795 aa9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 COL5A3P25940 1745 aaPredicted RBP9.7□□□□□ -0.86
CNEP1R1-204ENST00000562576 RTL1A6NKG5 1358 aa9.69□□□□□ -0.86
CNEP1R1-204ENST00000562576 SOX10P56693 466 aa9.69□□□□□ -0.86
CNEP1R1-204ENST00000562576 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
CNEP1R1-204ENST00000562576 LDHDQ86WU2 507 aa9.69□□□□□ -0.86
CNEP1R1-204ENST00000562576 HS6ST3Q8IZP7 471 aa9.69□□□□□ -0.86
CNEP1R1-204ENST00000562576 ADAMTS7Q9UKP4 1686 aa9.69□□□□□ -0.86
CNEP1R1-204ENST00000562576 AFDNP55196 1824 aaKnown RBP9.68□□□□□ -0.86
CNEP1R1-204ENST00000562576 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
CNEP1R1-204ENST00000562576 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
CNEP1R1-204ENST00000562576 SERPINB2P05120 415 aa9.68□□□□□ -0.86
CNEP1R1-204ENST00000562576 IFNL2Q8IZJ0 200 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms