RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 YEATS4O95619 227 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 LDHAL6AQ6ZMR3 332 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 BACH2Q9BYV9 841 aa13□□□□□ -0.33
RPAP1-204ENST00000562303 LRPPRCP42704 1394 aaKnown RBP12.99□□□□□ -0.33
RPAP1-204ENST00000562303 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
RPAP1-204ENST00000562303 MYZAPP0CAP1 466 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 NF2P35240 595 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 CCDC144CPQ8IYA2 1237 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 VTI1AQ96AJ9 217 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 BICD1Q96G01 975 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 AMOTL2Q9Y2J4 779 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 PAFAH1B1P43034 410 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
RPAP1-204ENST00000562303 GOLIM4O00461 696 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 MAP9Q49MG5 647 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 KRT28Q7Z3Y7 464 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 SLFN5Q08AF3 891 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 CWC25Q9NXE8 425 aaPredicted RBP12.98□□□□□ -0.33
RPAP1-204ENST00000562303 BCCIPQ9P287 314 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPAP1-204ENST00000562303 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 FERMT1Q9BQL6 677 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 SNRKQ9NRH2 765 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 KIF2AO00139 706 aaPredicted RBP12.98□□□□□ -0.33
RPAP1-204ENST00000562303 MCM4P33991 863 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 HOMER2Q9NSB8 354 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
RPAP1-204ENST00000562303 SHTN1A0MZ66 631 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
RPAP1-204ENST00000562303 SMC1AQ14683 1233 aaKnown RBP12.97□□□□□ -0.33
RPAP1-204ENST00000562303 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 NBPF5PQ86XG9 351 aaPredicted RBP12.97□□□□□ -0.33
RPAP1-204ENST00000562303 IFNL2Q8IZJ0 200 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 URI1O94763 535 aaPredicted RBP12.97□□□□□ -0.33
RPAP1-204ENST00000562303 GSTO1P78417 241 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 TROQ12816 1431 aaPredicted RBP12.97□□□□□ -0.33
RPAP1-204ENST00000562303 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 CCDC174Q6PII3 467 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
RPAP1-204ENST00000562303 PRPF4BQ13523 1007 aaKnown RBP12.96□□□□□ -0.33
RPAP1-204ENST00000562303 SSX2IPQ9Y2D8 614 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 MCM3P25205 808 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 EVI5LQ96CN4 794 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 DMRT2Q9Y5R5 561 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 USP16Q9Y5T5 823 aa12.96□□□□□ -0.33
RPAP1-204ENST00000562303 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.34
RPAP1-204ENST00000562303 ALS2CR12Q96Q35 445 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.34
RPAP1-204ENST00000562303 UBA7P41226 1012 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 SSH1Q8WYL5 1049 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 TMX1Q9H3N1 280 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 WDR70Q9NW82 654 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 HDAC9Q9UKV0 1011 aa12.96□□□□□ -0.34
RPAP1-204ENST00000562303 CTAGE5O15320 804 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 LMAN1P49257 510 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 HAND2P61296 217 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 NAIPQ13075 1403 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 EPRSP07814 1512 aaKnown RBP12.95□□□□□ -0.34
RPAP1-204ENST00000562303 ERICH4A6NGS2 130 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
RPAP1-204ENST00000562303 ZNF354CQ86Y25 554 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 TTC16Q8NEE8 873 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 CEP63Q96MT8 703 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 PANK2Q9BZ23 570 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
RPAP1-204ENST00000562303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAP1-204ENST00000562303 DAPK1P53355 1430 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 HLTFQ14527 1009 aaKnown RBP eCLIP12.94□□□□□ -0.34
RPAP1-204ENST00000562303 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
RPAP1-204ENST00000562303 LRRC27Q9C0I9 530 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 ACTN2P35609 894 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 CCDC152Q4G0S7 254 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 SYNCQ9H7C4 482 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 STX6O43752 255 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 METAP2P50579 478 aaKnown RBP eCLIP12.94□□□□□ -0.34
RPAP1-204ENST00000562303 FLIIQ13045 1269 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 RAB11FIP4Q86YS3 637 aa12.94□□□□□ -0.34
RPAP1-204ENST00000562303 LARP6Q9BRS8 491 aaKnown RBP12.94□□□□□ -0.34
RPAP1-204ENST00000562303 SLC26A6Q9BXS9 759 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms