RNA–Protein interactions for RNA: ENST00000561831.7

TCF4-210, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-210ENST00000561831 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
TCF4-210ENST00000561831 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
TCF4-210ENST00000561831 SNX14Q9Y5W7 946 aa12.8□□□□□ -0.36
TCF4-210ENST00000561831 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 GRM8O00222 908 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 PRPF40AO75400 957 aaKnown RBP12.79□□□□□ -0.36
TCF4-210ENST00000561831 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
TCF4-210ENST00000561831 CLCN1P35523 988 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 CWF19L2Q2TBE0 894 aaKnown RBP12.79□□□□□ -0.36
TCF4-210ENST00000561831 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 SUCLG2Q96I99 432 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
TCF4-210ENST00000561831 SLC52A2Q9HAB3 445 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 MRC1P22897 1456 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 DCCP43146 1447 aa12.79□□□□□ -0.36
TCF4-210ENST00000561831 PHKG2P15735 406 aa12.78□□□□□ -0.36
TCF4-210ENST00000561831 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
TCF4-210ENST00000561831 IGKV5-2P06315 115 aa12.78□□□□□ -0.36
TCF4-210ENST00000561831 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
TCF4-210ENST00000561831 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
TCF4-210ENST00000561831 COL18A1P39060 1754 aa12.78□□□□□ -0.36
TCF4-210ENST00000561831 SASH1O94885 1247 aa12.77□□□□□ -0.37
TCF4-210ENST00000561831 OS9Q13438 667 aaPredicted RBP12.77□□□□□ -0.37
TCF4-210ENST00000561831 LRP10Q7Z4F1 713 aa12.77□□□□□ -0.37
TCF4-210ENST00000561831 RAPGEF4Q8WZA2 1011 aa12.77□□□□□ -0.37
TCF4-210ENST00000561831 SNRKQ9NRH2 765 aa12.77□□□□□ -0.37
TCF4-210ENST00000561831 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
TCF4-210ENST00000561831 PA2G4Q9UQ80 394 aaKnown RBP12.77□□□□□ -0.37
TCF4-210ENST00000561831 MEGF6O75095 1541 aa12.77□□□□□ -0.37
TCF4-210ENST00000561831 AK9Q5TCS8 1911 aa12.77□□□□□ -0.37
TCF4-210ENST00000561831 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
TCF4-210ENST00000561831 CCDC173Q0VFZ6 552 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
TCF4-210ENST00000561831 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 C5P01031 1676 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 MBD3O95983 291 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
TCF4-210ENST00000561831 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
TCF4-210ENST00000561831 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
TCF4-210ENST00000561831 TM6SF1Q9BZW5 370 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 BICC1Q9H694 974 aaKnown RBP12.76□□□□□ -0.37
TCF4-210ENST00000561831 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 COL15A1P39059 1388 aa12.76□□□□□ -0.37
TCF4-210ENST00000561831 NEURL1BA8MQ27 555 aa12.75□□□□□ -0.37
TCF4-210ENST00000561831 IFIT2P09913 472 aaKnown RBP12.75□□□□□ -0.37
TCF4-210ENST00000561831 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
TCF4-210ENST00000561831 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
TCF4-210ENST00000561831 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
TCF4-210ENST00000561831 UBE2Q2Q8WVN8 375 aa12.75□□□□□ -0.37
TCF4-210ENST00000561831 CHAMP1Q96JM3 812 aa12.75□□□□□ -0.37
TCF4-210ENST00000561831 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
TCF4-210ENST00000561831 WDR33Q9C0J8 1336 aaKnown RBP12.75□□□□□ -0.37
TCF4-210ENST00000561831 ESPNB1AK53 854 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 AK2P54819 239 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 EAF2Q96CJ1 260 aaPredicted RBP12.74□□□□□ -0.37
TCF4-210ENST00000561831 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
TCF4-210ENST00000561831 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 TMEM63CQ9P1W3 806 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
TCF4-210ENST00000561831 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
TCF4-210ENST00000561831 ERBB4Q15303 1308 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 TMEM94Q12767 1356 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
TCF4-210ENST00000561831 PTH1RQ03431 593 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 GCKRQ14397 625 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 NECTIN1Q15223 517 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 NOL8Q76FK4 1167 aaKnown RBP12.74□□□□□ -0.37
TCF4-210ENST00000561831 RUFY3Q7L099 469 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 AACSQ86V21 672 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 RBSNQ9H1K0 784 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 NLRP2Q9NX02 1062 aa12.74□□□□□ -0.37
TCF4-210ENST00000561831 HIP1O00291 1037 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
TCF4-210ENST00000561831 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
TCF4-210ENST00000561831 LRSAM1Q6UWE0 723 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 RIC3Q7Z5B4 369 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 XAGE3Q8WTP9 111 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 ZNF496Q96IT1 587 aaPredicted RBP12.73□□□□□ -0.37
TCF4-210ENST00000561831 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 ZSWIM6Q9HCJ5 1215 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
TCF4-210ENST00000561831 TNS3Q68CZ2 1445 aa12.73□□□□□ -0.37
TCF4-210ENST00000561831 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 CPDO75976 1380 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
TCF4-210ENST00000561831 ATF3P18847 181 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
TCF4-210ENST00000561831 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 VPS53Q5VIR6 699 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 GLI3P10071 1580 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 CCDC171Q6TFL3 1326 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms