RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 FAM135AQ9P2D6 1515 aa8.73□□□□□ -1.01
CDH1-203ENST00000561751 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
CDH1-203ENST00000561751 ERBINQ96RT1 1412 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 ZNF142P52746 1687 aaPredicted RBP8.72□□□□□ -1.01
CDH1-203ENST00000561751 PLA2R1Q13018 1463 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 APPP05067 770 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 GUCY2CP25092 1073 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 DNAJB2P25686 324 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 CC2D1BQ5T0F9 858 aaKnown RBP8.72□□□□□ -1.01
CDH1-203ENST00000561751 ICE2Q659A1 982 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 Q6ZNB5 142 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 GOLGA6L1Q8N7Z2 621 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 GPT2Q8TD30 523 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 CHMP4AQ9BY43 222 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 SMC4Q9NTJ3 1288 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 CHIC2Q9UKJ5 165 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 SAMD9LQ8IVG5 1584 aa8.72□□□□□ -1.01
CDH1-203ENST00000561751 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.01
CDH1-203ENST00000561751 CCDC141Q6ZP82 1450 aa8.71□□□□□ -1.01
CDH1-203ENST00000561751 ASXL1Q8IXJ9 1541 aa8.71□□□□□ -1.01
CDH1-203ENST00000561751 RCCD1A6NED2 376 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 KIF2AO00139 706 aaPredicted RBP8.71□□□□□ -1.02
CDH1-203ENST00000561751 HTATSF1O43719 755 aaKnown RBP8.71□□□□□ -1.02
CDH1-203ENST00000561751 KDM4AO75164 1064 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 GRIPAP1Q4V328 841 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
CDH1-203ENST00000561751 IQUBQ8NA54 791 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 RBM46Q8TBY0 533 aaKnown RBP8.71□□□□□ -1.02
CDH1-203ENST00000561751 PANK1Q8TE04 598 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 TACO1Q9BSH4 297 aaKnown RBP8.71□□□□□ -1.02
CDH1-203ENST00000561751 KCND1Q9NSA2 647 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 PSD3Q9NYI0 1048 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 KNSTRNQ9Y448 316 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 MYO3AQ8NEV4 1616 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 POLR3AO14802 1390 aaPredicted RBP8.71□□□□□ -1.02
CDH1-203ENST00000561751 ANKRD50Q9ULJ7 1429 aa8.71□□□□□ -1.02
CDH1-203ENST00000561751 SYCP2Q9BX26 1530 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 ITSN2Q9NZM3 1697 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 MCCP23508 829 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 CASQ1P31415 396 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 GTF2A1P52655 376 aaPredicted RBP8.7□□□□□ -1.02
CDH1-203ENST00000561751 GPS2Q13227 327 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 ZKSCAN2Q63HK3 967 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 GCC1Q96CN9 775 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 INTS4Q96HW7 963 aaKnown RBP8.7□□□□□ -1.02
CDH1-203ENST00000561751 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
CDH1-203ENST00000561751 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.7□□□□□ -1.02
CDH1-203ENST00000561751 KIDINS220Q9ULH0 1771 aa8.7□□□□□ -1.02
CDH1-203ENST00000561751 SYCE3A1L190 88 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
CDH1-203ENST00000561751 NEMFO60524 1076 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 ZPR1O75312 459 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 PRPF40AO75400 957 aaKnown RBP8.69□□□□□ -1.02
CDH1-203ENST00000561751 TPM4P67936 248 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 LMOD3Q0VAK6 560 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 BLOC1S3Q6QNY0 202 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.69□□□□□ -1.02
CDH1-203ENST00000561751 WWC1Q8IX03 1113 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 ERO1AQ96HE7 468 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 CARD10Q9BWT7 1032 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 RBM28Q9NW13 759 aaKnown RBP8.69□□□□□ -1.02
CDH1-203ENST00000561751 CEP83Q9Y592 693 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 CEP170BQ9Y4F5 1589 aaPredicted RBP8.69□□□□□ -1.02
CDH1-203ENST00000561751 CLTCL1P53675 1640 aa8.69□□□□□ -1.02
CDH1-203ENST00000561751 GFRA3O60609 400 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 FCHSD2O94868 740 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 ADCY5O95622 1261 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 CCDC172P0C7W6 258 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 HNRNPH2P55795 449 aaKnown RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 PLCB2Q00722 1185 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 TRDNQ13061 729 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 DHX8Q14562 1220 aaKnown RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 NBPF20Q3BBV1 942 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 GGT6Q6P531 493 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 DZIP1LQ8IYY4 767 aaKnown RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 CCDC112Q8NEF3 446 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 ZNF428Q96B54 188 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 NOL10Q9BSC4 688 aaKnown RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 V9GY48 417 aaPredicted RBP8.68□□□□□ -1.02
CDH1-203ENST00000561751 SHANK2Q9UPX8 1470 aa8.68□□□□□ -1.02
CDH1-203ENST00000561751 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
CDH1-203ENST00000561751 APAF1O14727 1248 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 KIF3BO15066 747 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 EPB41L2O43491 1005 aaKnown RBP8.67□□□□□ -1.02
CDH1-203ENST00000561751 CDC45O75419 566 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 ELP1O95163 1332 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 BRD1O95696 1058 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 SLC10A3P09131 477 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 RAD51AP2Q09MP3 1159 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 CCDC183Q5T5S1 534 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 RBM26Q5T8P6 1007 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms