RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 PIGBQ92521 554 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 SUCLG2Q96I99 432 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 LRRCC1Q9C099 1032 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 ARFGEF2Q9Y6D5 1785 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 GRM8O00222 908 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 SDSP20132 328 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 STAP2Q9UGK3 403 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 NUP188Q5SRE5 1749 aa12.62□□□□□ -0.39
TUBGCP4-202ENST00000561691 BCL9O00512 1426 aa12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 SRGAP3O43295 1099 aa12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 GCKRQ14397 625 aa12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 C22orf23Q9BZE7 217 aa12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 SPATA31A1Q5TZJ5 1347 aa12.61□□□□□ -0.39
TUBGCP4-202ENST00000561691 ITGB4P16144 1822 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 A1BGP04217 495 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 CASP7P55210 303 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 KIF2CQ99661 725 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 ATG3Q9NT62 314 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 ASAP1Q9ULH1 1129 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 COL15A1P39059 1388 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 CDC45O75419 566 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 CLCN1P35523 988 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 EPHA10Q5JZY3 1008 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 MYD88Q99836 296 aa12.6□□□□□ -0.39
TUBGCP4-202ENST00000561691 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 RAB11FIP3O75154 756 aa12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 TSHZ3Q63HK5 1081 aa12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 TTLL7Q6ZT98 887 aa12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 PLBD2Q8NHP8 589 aa12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
TUBGCP4-202ENST00000561691 ADAMTS2O95450 1211 aa12.58□□□□□ -0.39
TUBGCP4-202ENST00000561691 L1TD1Q5T7N2 865 aaKnown RBP12.58□□□□□ -0.39
TUBGCP4-202ENST00000561691 BICC1Q9H694 974 aaKnown RBP12.58□□□□□ -0.39
TUBGCP4-202ENST00000561691 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.39
TUBGCP4-202ENST00000561691 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.39
TUBGCP4-202ENST00000561691 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.58□□□□□ -0.39
TUBGCP4-202ENST00000561691 TJP1Q07157 1748 aa12.58□□□□□ -0.4
TUBGCP4-202ENST00000561691 SURF6O75683 361 aaKnown RBP12.58□□□□□ -0.4
TUBGCP4-202ENST00000561691 MX1P20591 662 aa12.58□□□□□ -0.4
TUBGCP4-202ENST00000561691 UPF2Q9HAU5 1272 aaKnown RBP12.58□□□□□ -0.4
TUBGCP4-202ENST00000561691 NWD2Q9ULI1 1742 aa12.58□□□□□ -0.4
TUBGCP4-202ENST00000561691 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 USP42Q9H9J4 1324 aaKnown RBP12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 TOM1O60784 492 aa12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 IL1RAPL2Q9NP60 686 aa12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 PA2G4Q9UQ80 394 aaKnown RBP12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 AOX1Q06278 1338 aa12.57□□□□□ -0.4
TUBGCP4-202ENST00000561691 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 PIP4K2BP78356 416 aa12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 PI4K2BQ8TCG2 481 aa12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 RABL6Q3YEC7 729 aaPredicted RBP12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 UNC5CLQ8IV45 518 aa12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 KIF1BPQ96EK5 621 aa12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 THRAP3Q9Y2W1 955 aaKnown RBP12.56□□□□□ -0.4
TUBGCP4-202ENST00000561691 DOT1LQ8TEK3 1739 aa12.55□□□□□ -0.4
TUBGCP4-202ENST00000561691 ATP5J2-PTCD1G3V325 749 aa12.55□□□□□ -0.4
TUBGCP4-202ENST00000561691 EXOC5O00471 708 aa12.55□□□□□ -0.4
TUBGCP4-202ENST00000561691 H7C1W4 665 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 SASH1O94885 1247 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 CDCA7Q9BWT1 371 aaPredicted RBP12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 BARGINQ6ZT62 677 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 MARCH10Q8NA82 808 aaPredicted RBP12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
TUBGCP4-202ENST00000561691 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 FOXO4P98177 505 aa12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 HSP90AB4PQ58FF6 505 aa12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 HDAC5Q9UQL6 1122 aa12.53□□□□□ -0.4
TUBGCP4-202ENST00000561691 CYP19A1P11511 503 aaPredicted RBP12.52□□□□□ -0.4
TUBGCP4-202ENST00000561691 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.4
TUBGCP4-202ENST00000561691 UBAP1LF5GYI3 381 aa12.52□□□□□ -0.41
TUBGCP4-202ENST00000561691 PRIM1P49642 420 aaKnown RBP12.52□□□□□ -0.41
TUBGCP4-202ENST00000561691 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
TUBGCP4-202ENST00000561691 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.41
TUBGCP4-202ENST00000561691 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 A0A087WZG4 1122 aa12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 CHMLP26374 656 aa12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 IL25Q9H293 177 aa12.51□□□□□ -0.41
TUBGCP4-202ENST00000561691 ZBTB3Q9H5J0 574 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms