RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 KSR2Q6VAB6 950 aa16.1■□□□□ 0.17
CMTM4-203ENST00000561680 TTLL7Q6ZT98 887 aa16.1■□□□□ 0.17
CMTM4-203ENST00000561680 DZIP1LQ8IYY4 767 aaKnown RBP16.1■□□□□ 0.17
CMTM4-203ENST00000561680 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.173e-7■■■■□ 25.4
CMTM4-203ENST00000561680 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
CMTM4-203ENST00000561680 LAMB2P55268 1798 aa16.1■□□□□ 0.17
CMTM4-203ENST00000561680 PI4KAP2A4QPH2 592 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 F6X3S4 739 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 ILDR2Q71H61 639 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
CMTM4-203ENST00000561680 PI4KAP1Q8N8J0 262 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
CMTM4-203ENST00000561680 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 KIF6Q6ZMV9 814 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 DNAAF4Q8WXU2 420 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
CMTM4-203ENST00000561680 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.16
CMTM4-203ENST00000561680 A0A087WZG4 1122 aa16.07■□□□□ 0.16
CMTM4-203ENST00000561680 ADRA2BP18089 450 aa16.07■□□□□ 0.16
CMTM4-203ENST00000561680 SSFA2P28290 1259 aa16.07■□□□□ 0.16
CMTM4-203ENST00000561680 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
CMTM4-203ENST00000561680 DZIP3Q86Y13 1208 aaKnown RBP16.07■□□□□ 0.16
CMTM4-203ENST00000561680 INTS3Q68E01 1043 aaKnown RBP16.06■□□□□ 0.16
CMTM4-203ENST00000561680 RIC3Q7Z5B4 369 aa16.06■□□□□ 0.16
CMTM4-203ENST00000561680 TMEM57Q8N5G2 664 aa16.06■□□□□ 0.16
CMTM4-203ENST00000561680 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
CMTM4-203ENST00000561680 IBTKQ9P2D0 1353 aaPredicted RBP16.05■□□□□ 0.16
CMTM4-203ENST00000561680 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
CMTM4-203ENST00000561680 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
CMTM4-203ENST00000561680 NEFLP07196 543 aa16.05■□□□□ 0.16
CMTM4-203ENST00000561680 IRX6P78412 446 aaPredicted RBP16.05■□□□□ 0.16
CMTM4-203ENST00000561680 METTL22Q9BUU2 404 aaPredicted RBP16.05■□□□□ 0.16
CMTM4-203ENST00000561680 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
CMTM4-203ENST00000561680 TBC1D2BQ9UPU7 963 aa16.05■□□□□ 0.16
CMTM4-203ENST00000561680 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
CMTM4-203ENST00000561680 RGL2O15211 777 aa16.04■□□□□ 0.16
CMTM4-203ENST00000561680 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
CMTM4-203ENST00000561680 MVPQ14764 893 aaKnown RBP16.04■□□□□ 0.16
CMTM4-203ENST00000561680 SLC4A10Q6U841 1118 aa16.04■□□□□ 0.16
CMTM4-203ENST00000561680 GIGYF2Q6Y7W6 1299 aaKnown RBP16.04■□□□□ 0.16
CMTM4-203ENST00000561680 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
CMTM4-203ENST00000561680 USP42Q9H9J4 1324 aaKnown RBP16.03■□□□□ 0.16
CMTM4-203ENST00000561680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.03■□□□□ 0.16
CMTM4-203ENST00000561680 PHF14O94880 888 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 TRAPPC3LQ5T215 181 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 BEND3Q5T5X7 828 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
CMTM4-203ENST00000561680 CRBNQ96SW2 442 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 NARFQ9UHQ1 456 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 COG6Q9Y2V7 657 aa16.03■□□□□ 0.16
CMTM4-203ENST00000561680 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 SLC15A2Q16348 729 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 HLFQ16534 295 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 LINS1Q8NG48 757 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 ARXQ96QS3 562 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 MYD88Q99836 296 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 STK32BQ9NY57 414 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
CMTM4-203ENST00000561680 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 IGKV5-2P06315 115 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 TCIRG1Q13488 830 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 HSP90AB3PQ58FF7 597 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 FLAD1Q8NFF5 587 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
CMTM4-203ENST00000561680 NEURL1BA8MQ27 555 aa16■□□□□ 0.15
CMTM4-203ENST00000561680 ZPR1O75312 459 aa16■□□□□ 0.15
CMTM4-203ENST00000561680 RFC4P35249 363 aa16■□□□□ 0.15
CMTM4-203ENST00000561680 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
CMTM4-203ENST00000561680 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
CMTM4-203ENST00000561680 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
CMTM4-203ENST00000561680 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
CMTM4-203ENST00000561680 CWF19L2Q2TBE0 894 aaKnown RBP15.99■□□□□ 0.15
CMTM4-203ENST00000561680 USPL1Q5W0Q7 1092 aa15.99■□□□□ 0.15
CMTM4-203ENST00000561680 EXOC6Q8TAG9 804 aa15.99■□□□□ 0.15
CMTM4-203ENST00000561680 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
CMTM4-203ENST00000561680 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
CMTM4-203ENST00000561680 FKBP8Q14318 412 aa15.98■□□□□ 0.15
CMTM4-203ENST00000561680 COL23A1Q86Y22 540 aaPredicted RBP15.98■□□□□ 0.15
CMTM4-203ENST00000561680 ZNF34Q8IZ26 560 aa15.98■□□□□ 0.15
CMTM4-203ENST00000561680 ANKRD31Q8N7Z5 1873 aa15.98■□□□□ 0.15
CMTM4-203ENST00000561680 UBN2Q6ZU65 1347 aa15.97■□□□□ 0.15
CMTM4-203ENST00000561680 ZBTB7BO15156 539 aaPredicted RBP15.97■□□□□ 0.15
CMTM4-203ENST00000561680 GCKRQ14397 625 aa15.97■□□□□ 0.15
CMTM4-203ENST00000561680 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
CMTM4-203ENST00000561680 UTYO14607 1347 aa15.96■□□□□ 0.15
CMTM4-203ENST00000561680 SPEF2Q9C093 1822 aa15.96■□□□□ 0.15
CMTM4-203ENST00000561680 GYS1P13807 737 aa15.96■□□□□ 0.15
CMTM4-203ENST00000561680 NLRP10Q86W26 655 aa15.96■□□□□ 0.15
CMTM4-203ENST00000561680 MEIS3Q99687 375 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms