RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ALDH16A1Q8IZ83 802 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 C7orf43Q8WVR3 580 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
HERC1-215ENST00000561436 MBIPQ9NS73 344 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 NDFIP2Q9NV92 336 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 ZDHHC3Q9NYG2 299 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 SLAIN2Q9P270 581 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 GJA3Q9Y6H8 435 aa6.71□□□□□ -1.34
HERC1-215ENST00000561436 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
HERC1-215ENST00000561436 SCNN1AP37088 669 aa6.7□□□□□ -1.34
HERC1-215ENST00000561436 SVOPQ8N4V2 548 aa6.7□□□□□ -1.34
HERC1-215ENST00000561436 MKNK1Q9BUB5 465 aa6.7□□□□□ -1.34
HERC1-215ENST00000561436 CCDC180Q9P1Z9 1646 aa6.69□□□□□ -1.34
HERC1-215ENST00000561436 MAPTP10636 758 aaKnown RBP6.69□□□□□ -1.34
HERC1-215ENST00000561436 FGFR3P22607 806 aa6.69□□□□□ -1.34
HERC1-215ENST00000561436 FKBP5Q13451 457 aaPredicted RBP6.69□□□□□ -1.34
HERC1-215ENST00000561436 C1orf216Q8TAB5 229 aa6.69□□□□□ -1.34
HERC1-215ENST00000561436 ACDQ96AP0 544 aa6.69□□□□□ -1.34
HERC1-215ENST00000561436 GMCL1Q96IK5 515 aa6.69□□□□□ -1.34
HERC1-215ENST00000561436 CHMP3Q9Y3E7 222 aa6.69□□□□□ -1.34
HERC1-215ENST00000561436 ATG7O95352 703 aa6.68□□□□□ -1.34
HERC1-215ENST00000561436 SLURP2P0DP57 97 aa6.68□□□□□ -1.34
HERC1-215ENST00000561436 WEE1P30291 646 aa6.68□□□□□ -1.34
HERC1-215ENST00000561436 SRSF11Q05519 484 aaKnown RBP6.68□□□□□ -1.34
HERC1-215ENST00000561436 TNP2Q05952 138 aa6.68□□□□□ -1.34
HERC1-215ENST00000561436 RAB44Q7Z6P3 723 aaPredicted RBP6.68□□□□□ -1.34
HERC1-215ENST00000561436 KLK14Q9P0G3 267 aa6.68□□□□□ -1.34
HERC1-215ENST00000561436 PCDHGC4Q9Y5F7 938 aa6.68□□□□□ -1.34
HERC1-215ENST00000561436 CELA2BP08218 269 aaPredicted RBP6.67□□□□□ -1.34
HERC1-215ENST00000561436 BMP4P12644 408 aa6.67□□□□□ -1.34
HERC1-215ENST00000561436 IGFBP4P22692 258 aa6.67□□□□□ -1.34
HERC1-215ENST00000561436 SFSWAPQ12872 951 aaKnown RBP6.67□□□□□ -1.34
HERC1-215ENST00000561436 POTEAQ6S8J7 498 aa6.67□□□□□ -1.34
HERC1-215ENST00000561436 C1orf229Q6ZS94 237 aaPredicted RBP6.67□□□□□ -1.34
HERC1-215ENST00000561436 NLRP8Q86W28 1048 aa6.67□□□□□ -1.34
HERC1-215ENST00000561436 SUSD3Q96L08 255 aa6.67□□□□□ -1.34
HERC1-215ENST00000561436 ATXN7L1Q9ULK2 861 aaPredicted RBP6.67□□□□□ -1.34
HERC1-215ENST00000561436 ZBTB7CA1YPR0 619 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 HIRAP54198 1017 aaPredicted RBP6.66□□□□□ -1.34
HERC1-215ENST00000561436 LBRQ14739 615 aaKnown RBP6.66□□□□□ -1.34
HERC1-215ENST00000561436 OCLNQ16625 522 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 RETREG2Q8NC44 543 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 CFHR5Q9BXR6 569 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 QTRT2Q9H974 415 aaKnown RBP6.66□□□□□ -1.34
HERC1-215ENST00000561436 NEUROD4Q9HD90 331 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 STK17AQ9UEE5 414 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 BCS1LQ9Y276 419 aa6.66□□□□□ -1.34
HERC1-215ENST00000561436 DGKZQ13574 1117 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 ELOAQ14241 798 aaKnown RBP6.65□□□□□ -1.34
HERC1-215ENST00000561436 FIGNL1Q6PIW4 674 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 KCTD17Q8N5Z5 321 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 CEP63Q96MT8 703 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 TRAIPQ9BWF2 469 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 SAP130Q9H0E3 1048 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 PHF24Q9UPV7 400 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 USTQ9Y2C2 406 aa6.65□□□□□ -1.34
HERC1-215ENST00000561436 PCBP4P57723 403 aaKnown RBP6.64□□□□□ -1.35
HERC1-215ENST00000561436 NAA30Q147X3 362 aaPredicted RBP6.64□□□□□ -1.35
HERC1-215ENST00000561436 C1orf53Q5VUE5 145 aa6.64□□□□□ -1.35
HERC1-215ENST00000561436 VTI1AQ96AJ9 217 aa6.64□□□□□ -1.35
HERC1-215ENST00000561436 SLC30A3Q99726 388 aa6.64□□□□□ -1.35
HERC1-215ENST00000561436 OXCT2Q9BYC2 517 aaPredicted RBP6.64□□□□□ -1.35
HERC1-215ENST00000561436 LRFN2Q9ULH4 789 aa6.64□□□□□ -1.35
HERC1-215ENST00000561436 USP20Q9Y2K6 914 aa6.64□□□□□ -1.35
HERC1-215ENST00000561436 NEURL1BA8MQ27 555 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 SHISA8B8ZZ34 492 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 PATL2C9JE40 543 aaKnown RBP6.63□□□□□ -1.35
HERC1-215ENST00000561436 EFSO43281 561 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 ARHGEF15O94989 841 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 FAM157BP0CG42 384 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 TYRO3Q06418 890 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 FAM26DQ5JW98 314 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 STAG2Q8N3U4 1231 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 BRD7Q9NPI1 651 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 KLF15Q9UIH9 416 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 GGA1Q9UJY5 639 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 ADAMTS8Q9UP79 889 aa6.63□□□□□ -1.35
HERC1-215ENST00000561436 RTN1Q16799 776 aa6.62□□□□□ -1.35
HERC1-215ENST00000561436 SWI5Q1ZZU3 235 aa6.62□□□□□ -1.35
HERC1-215ENST00000561436 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
HERC1-215ENST00000561436 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
HERC1-215ENST00000561436 CXXC1Q9P0U4 656 aaPredicted RBP6.62□□□□□ -1.35
HERC1-215ENST00000561436 TMEM88BA6NKF7 163 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 FOXO3O43524 673 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 BCRP11274 1271 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 GRNP28799 593 aaKnown RBP6.61□□□□□ -1.35
HERC1-215ENST00000561436 MAP3K10Q02779 954 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 COX20Q5RI15 118 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 B4GALNT3Q6L9W6 998 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 BTLAQ7Z6A9 289 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 SEPT3Q9UH03 358 aa6.61□□□□□ -1.35
HERC1-215ENST00000561436 DNMT3AQ9Y6K1 912 aaPredicted RBP6.61□□□□□ -1.35
HERC1-215ENST00000561436 MAP2K3P46734 347 aa6.6□□□□□ -1.35
HERC1-215ENST00000561436 FCHSD1Q86WN1 690 aa6.6□□□□□ -1.35
HERC1-215ENST00000561436 GALNT6Q8NCL4 622 aa6.6□□□□□ -1.35
HERC1-215ENST00000561436 PRR12Q9ULL5 1215 aa6.6□□□□□ -1.35
HERC1-215ENST00000561436 NSFL1CQ9UNZ2 370 aaKnown RBP6.6□□□□□ -1.35
HERC1-215ENST00000561436 OIP5O43482 229 aa6.59□□□□□ -1.35
HERC1-215ENST00000561436 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms