RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	KCP	Q6ZWJ8	1503 aa		12.83	□□□□□ -0.36
KNSTRN-215	ENST00000561367	HEG1	Q9ULI3	1381 aa		12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	LY75	O60449	1722 aa		12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	SNRPA1	P09661	255 aa	Known RBP	12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	EIF4A1	P60842	406 aa	Known RBP	12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	PTF1A	Q7RTS3	328 aa		12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	MBIP	Q9NS73	344 aa		12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	LAS1L	Q9Y4W2	734 aa	Known RBP	12.82	□□□□□ -0.36
KNSTRN-215	ENST00000561367	SLFN5	Q08AF3	891 aa		12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	SLC39A6	Q13433	755 aa		12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	TXNRD1	Q16881	649 aa		12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	ZNF496	Q96IT1	587 aa	Predicted RBP	12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	CAMKK2	Q96RR4	588 aa		12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	CCNL1	Q9UK58	526 aa	Predicted RBP	12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	KAT6B	Q8WYB5	2073 aa		12.81	□□□□□ -0.36
KNSTRN-215	ENST00000561367	PTCD1	O75127	700 aa	Known RBP	12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	STARD3NL	O95772	234 aa		12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	CT47B1	P0C2W7	299 aa	Predicted RBP	12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	ATP6V1A	P38606	617 aa		12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	TRMT2A	Q8IZ69	625 aa	Known RBP	12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	ZNF428	Q96B54	188 aa		12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	MIS18A	Q9NYP9	233 aa		12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	FANCI	Q9NVI1	1328 aa		12.8	□□□□□ -0.36
KNSTRN-215	ENST00000561367	GIGYF1	O75420	1035 aa	Predicted RBP	12.79	□□□□□ -0.36
KNSTRN-215	ENST00000561367	ERBB4	Q15303	1308 aa		12.79	□□□□□ -0.36
KNSTRN-215	ENST00000561367	SOCS7	O14512	581 aa		12.78	□□□□□ -0.36
KNSTRN-215	ENST00000561367	EN1	Q05925	392 aa	Predicted RBP	12.78	□□□□□ -0.36
KNSTRN-215	ENST00000561367	RC3H1	Q5TC82	1133 aa	Known RBP	12.78	□□□□□ -0.36
KNSTRN-215	ENST00000561367	C5	P01031	1676 aa		12.77	□□□□□ -0.36
KNSTRN-215	ENST00000561367	SENP3-EIF4A1	A0A087X0R7	540 aa		12.77	□□□□□ -0.37
KNSTRN-215	ENST00000561367	KCNQ3	O43525	872 aa		12.77	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CNTNAP4	Q9C0A0	1308 aa		12.77	□□□□□ -0.37
KNSTRN-215	ENST00000561367	RREB1	Q92766	1687 aa		12.77	□□□□□ -0.37
KNSTRN-215	ENST00000561367	EZH2	Q15910	746 aa	Known RBP	12.76	□□□□□ -0.37
KNSTRN-215	ENST00000561367	NBPF14	Q5TI25	921 aa		12.76	□□□□□ -0.37
KNSTRN-215	ENST00000561367	DUSP27	Q5VZP5	1158 aa		12.76	□□□□□ -0.37
KNSTRN-215	ENST00000561367	TSR2	Q969E8	191 aa	Known RBP	12.76	□□□□□ -0.37
KNSTRN-215	ENST00000561367	SLC4A9	Q96Q91	983 aa		12.76	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CYP19A1	P11511	503 aa	Predicted RBP	12.75	□□□□□ -0.37
KNSTRN-215	ENST00000561367	ITPK1	Q13572	414 aa		12.75	□□□□□ -0.37
KNSTRN-215	ENST00000561367	TWISTNB	Q3B726	338 aa	Predicted RBP	12.75	□□□□□ -0.37
KNSTRN-215	ENST00000561367	DEFB132	Q7Z7B7	95 aa		12.75	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CDAN1	Q8IWY9	1227 aa		12.75	□□□□□ -0.37
KNSTRN-215	ENST00000561367	LRRC4B	Q9NT99	713 aa		12.75	□□□□□ -0.37
KNSTRN-215	ENST00000561367	LAMB4	A4D0S4	1761 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	TJP1	Q07157	1748 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	POTEB3	A0JP26	581 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	KIF3C	O14782	793 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	EXOSC9	Q06265	439 aa	Known RBP	12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CCDC30	Q5VVM6	783 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	POTEB	Q6S5H4	581 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	DNAJC10	Q8IXB1	793 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	FLAD1	Q8NFF5	587 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CDCA7L	Q96GN5	454 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CCDC87	Q9NVE4	849 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	PCDH10	Q9P2E7	1040 aa		12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	COL5A3	P25940	1745 aa	Predicted RBP	12.74	□□□□□ -0.37
KNSTRN-215	ENST00000561367	IL6ST	P40189	918 aa	Predicted RBP	12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	CRKL	P46109	303 aa	Known RBP	12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	HDGFL1	Q5TGJ6	251 aa		12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	NPM2	Q86SE8	214 aa	Known RBP	12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	C8orf58	Q8NAV2	365 aa		12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	LINC00116	Q8NCU8	138 aa		12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	AK7	Q96M32	723 aa		12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	DBF4	Q9UBU7	674 aa	Predicted RBP	12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	USP16	Q9Y5T5	823 aa		12.73	□□□□□ -0.37
KNSTRN-215	ENST00000561367	TAF1L	Q8IZX4	1826 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	C4B	P0C0L5	1744 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	VAMP4	O75379	141 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	RPS6KA4	O75676	772 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	SSFA2	P28290	1259 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	YTHDC1	Q96MU7	727 aa	Known RBP	12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	STK31	Q9BXU1	1019 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	PLSCR2	Q9NRY7	297 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	STK32B	Q9NY57	414 aa		12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	RTCB	Q9Y3I0	505 aa	Known RBP	12.72	□□□□□ -0.37
KNSTRN-215	ENST00000561367	NUP188	Q5SRE5	1749 aa		12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367		A0A087WZG4	1122 aa		12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	EMP3	P54852	163 aa		12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	SLC15A2	Q16348	729 aa		12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	ALDH1L2	Q3SY69	923 aa		12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	INTS5	Q6P9B9	1019 aa	Known RBP	12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	HYPK	Q9NX55	129 aa		12.71	□□□□□ -0.37
KNSTRN-215	ENST00000561367	C2orf72	A6NCS6	295 aa		12.7	□□□□□ -0.38
KNSTRN-215	ENST00000561367	DOK7	Q18PE1	504 aa		12.7	□□□□□ -0.38
KNSTRN-215	ENST00000561367	KRT24	Q2M2I5	525 aa		12.7	□□□□□ -0.38
KNSTRN-215	ENST00000561367	TSPYL6	Q8N831	410 aa		12.7	□□□□□ -0.38
KNSTRN-215	ENST00000561367	PRAMEF22	A3QJZ6	481 aa		12.69	□□□□□ -0.38
KNSTRN-215	ENST00000561367	ELL2	O00472	640 aa	Predicted RBP	12.69	□□□□□ -0.38
KNSTRN-215	ENST00000561367	GNPAT	O15228	680 aa		12.69	□□□□□ -0.38
KNSTRN-215	ENST00000561367	EIF2S2	P20042	333 aa	Known RBP	12.69	□□□□□ -0.38
KNSTRN-215	ENST00000561367	EIF5	P55010	431 aa	Known RBP	12.69	□□□□□ -0.38
KNSTRN-215	ENST00000561367	TFCP2L1	Q9NZI6	479 aa		12.69	□□□□□ -0.38
KNSTRN-215	ENST00000561367	A1BG	P04217	495 aa		12.68	□□□□□ -0.38
KNSTRN-215	ENST00000561367	HOXB1	P14653	301 aa	Predicted RBP	12.68	□□□□□ -0.38
KNSTRN-215	ENST00000561367	BRPF1	P55201	1214 aa	Predicted RBP	12.68	□□□□□ -0.38
KNSTRN-215	ENST00000561367	KCNQ4	P56696	695 aa		12.68	□□□□□ -0.38
KNSTRN-215	ENST00000561367	TRAPPC3L	Q5T215	181 aa		12.68	□□□□□ -0.38
KNSTRN-215	ENST00000561367	ZBTB1	Q9Y2K1	713 aa		12.68	□□□□□ -0.38

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