RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TSPYL6Q8N831 410 aa13.62□□□□□ -0.23
TPM1-229ENST00000561242 CNBD1Q8NA66 436 aa13.62□□□□□ -0.23
TPM1-229ENST00000561242 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
TPM1-229ENST00000561242 PDGFDQ9GZP0 370 aaPredicted RBP13.62□□□□□ -0.23
TPM1-229ENST00000561242 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
TPM1-229ENST00000561242 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
TPM1-229ENST00000561242 PDE6BP35913 854 aa13.61□□□□□ -0.23
TPM1-229ENST00000561242 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
TPM1-229ENST00000561242 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
TPM1-229ENST00000561242 C4BP0C0L5 1744 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 GPTP24298 496 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 NFIXQ14938 502 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 TBC1D9BQ66K14 1250 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 SLC4A10Q6U841 1118 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 KSR2Q6VAB6 950 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
TPM1-229ENST00000561242 UTP14AQ9BVJ6 771 aaKnown RBP13.6□□□□□ -0.23
TPM1-229ENST00000561242 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
TPM1-229ENST00000561242 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 CD2APQ9Y5K6 639 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 ZNF521Q96K83 1311 aa13.6□□□□□ -0.23
TPM1-229ENST00000561242 CARMIL3Q8ND23 1372 aa13.59□□□□□ -0.23
TPM1-229ENST00000561242 H0YIN7 160 aa13.59□□□□□ -0.23
TPM1-229ENST00000561242 FLIIQ13045 1269 aa13.59□□□□□ -0.23
TPM1-229ENST00000561242 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
TPM1-229ENST00000561242 GPR162Q16538 588 aa13.59□□□□□ -0.23
TPM1-229ENST00000561242 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
TPM1-229ENST00000561242 MS4A1P11836 297 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 TGFB2P61812 414 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 FRAT1Q92837 279 aaPredicted RBP13.58□□□□□ -0.24
TPM1-229ENST00000561242 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 MYD88Q99836 296 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 API5Q9BZZ5 524 aaKnown RBP13.58□□□□□ -0.24
TPM1-229ENST00000561242 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
TPM1-229ENST00000561242 MAP3K2Q9Y2U5 619 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
TPM1-229ENST00000561242 LY75O60449 1722 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 PI4KAP2A4QPH2 592 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 TM4SF1P30408 202 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 PDIA6Q15084 440 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 HLFQ16534 295 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 PI4KAP1Q8N8J0 262 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 RPGRQ92834 1020 aaKnown RBP13.57□□□□□ -0.24
TPM1-229ENST00000561242 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
TPM1-229ENST00000561242 FHDC1Q9C0D6 1143 aaPredicted RBP13.57□□□□□ -0.24
TPM1-229ENST00000561242 PTPRCP08575 1304 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
TPM1-229ENST00000561242 RREB1Q92766 1687 aa13.56□□□□□ -0.24
TPM1-229ENST00000561242 AMIGO3Q86WK7 504 aa13.56□□□□□ -0.24
TPM1-229ENST00000561242 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
TPM1-229ENST00000561242 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
TPM1-229ENST00000561242 C9orf78Q9NZ63 289 aaPredicted RBP13.56□□□□□ -0.24
TPM1-229ENST00000561242 C5P01031 1676 aa13.56□□□□□ -0.24
TPM1-229ENST00000561242 NUP188Q5SRE5 1749 aa13.56□□□□□ -0.24
TPM1-229ENST00000561242 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
TPM1-229ENST00000561242 POLRMTO00411 1230 aaKnown RBP13.55□□□□□ -0.24
TPM1-229ENST00000561242 PTGER2P43116 358 aa13.55□□□□□ -0.24
TPM1-229ENST00000561242 C2CD5Q86YS7 1000 aa13.55□□□□□ -0.24
TPM1-229ENST00000561242 FTSJ3Q8IY81 847 aaKnown RBP13.55□□□□□ -0.24
TPM1-229ENST00000561242 CCDC191Q8NCU4 936 aa13.55□□□□□ -0.24
TPM1-229ENST00000561242 METTL22Q9BUU2 404 aaPredicted RBP13.55□□□□□ -0.24
TPM1-229ENST00000561242 BRIP1Q9BX63 1249 aa13.55□□□□□ -0.24
TPM1-229ENST00000561242 BCL2L13Q9BXK5 485 aa13.55□□□□□ -0.24
TPM1-229ENST00000561242 SYT17Q9BSW7 474 aa13.54□□□□□ -0.24
TPM1-229ENST00000561242 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
TPM1-229ENST00000561242 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
TPM1-229ENST00000561242 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
TPM1-229ENST00000561242 GRIN3BO60391 1043 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
TPM1-229ENST00000561242 SSH1Q8WYL5 1049 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 RBM17Q96I25 401 aaKnown RBP13.53□□□□□ -0.24
TPM1-229ENST00000561242 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 CHMP4BQ9H444 224 aaKnown RBP13.53□□□□□ -0.24
TPM1-229ENST00000561242 BCL2L12Q9HB09 334 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
TPM1-229ENST00000561242 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.24
TPM1-229ENST00000561242 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
TPM1-229ENST00000561242 DALRD3Q5D0E6 543 aaKnown RBP13.52□□□□□ -0.25
TPM1-229ENST00000561242 SUSD4Q5VX71 490 aa13.52□□□□□ -0.25
TPM1-229ENST00000561242 ZKSCAN2Q63HK3 967 aa13.52□□□□□ -0.25
TPM1-229ENST00000561242 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
TPM1-229ENST00000561242 NLRP10Q86W26 655 aa13.52□□□□□ -0.25
TPM1-229ENST00000561242 ZNF34Q8IZ26 560 aa13.52□□□□□ -0.25
TPM1-229ENST00000561242 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.25
TPM1-229ENST00000561242 LINS1Q8NG48 757 aa13.52□□□□□ -0.25
TPM1-229ENST00000561242 NOB1Q9ULX3 412 aaKnown RBP13.52□□□□□ -0.25
TPM1-229ENST00000561242 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
TPM1-229ENST00000561242 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
TPM1-229ENST00000561242 RARSP54136 660 aaKnown RBP13.51□□□□□ -0.25
TPM1-229ENST00000561242 DDR1Q08345 913 aa13.51□□□□□ -0.25
TPM1-229ENST00000561242 TRIM28Q13263 835 aaKnown RBP13.51□□□□□ -0.25
TPM1-229ENST00000561242 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
TPM1-229ENST00000561242 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
TPM1-229ENST00000561242 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
TPM1-229ENST00000561242 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
TPM1-229ENST00000561242 NPR1P16066 1061 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms