RNA–Protein interactions for RNA: ENST00000561091.1

SHF-209, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5

Gene SHF, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-209ENST00000561091 R3HDM1Q15032 1099 aaKnown RBP20.38■□□□□ 0.85
SHF-209ENST00000561091 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
SHF-209ENST00000561091 ZBTB3Q9H5J0 574 aa20.38■□□□□ 0.85
SHF-209ENST00000561091 FKBP5Q13451 457 aaPredicted RBP20.37■□□□□ 0.85
SHF-209ENST00000561091 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
SHF-209ENST00000561091 FRAT1Q92837 279 aaPredicted RBP20.37■□□□□ 0.85
SHF-209ENST00000561091 PDGFDQ9GZP0 370 aaPredicted RBP20.37■□□□□ 0.85
SHF-209ENST00000561091 ADCY9O60503 1353 aa20.36■□□□□ 0.85
SHF-209ENST00000561091 MAP3K15Q6ZN16 1313 aa20.36■□□□□ 0.85
SHF-209ENST00000561091 KIF16BQ96L93 1317 aa20.36■□□□□ 0.85
SHF-209ENST00000561091 USP42Q9H9J4 1324 aaKnown RBP20.36■□□□□ 0.85
SHF-209ENST00000561091 PSDA5PKW4 1024 aaPredicted RBP20.36■□□□□ 0.85
SHF-209ENST00000561091 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
SHF-209ENST00000561091 NARFQ9UHQ1 456 aa20.36■□□□□ 0.85
SHF-209ENST00000561091 AFDNP55196 1824 aaKnown RBP20.35■□□□□ 0.85
SHF-209ENST00000561091 HLFQ16534 295 aa20.35■□□□□ 0.85
SHF-209ENST00000561091 USPL1Q5W0Q7 1092 aa20.35■□□□□ 0.85
SHF-209ENST00000561091 ANKRD13DQ6ZTN6 518 aa20.35■□□□□ 0.85
SHF-209ENST00000561091 PLBD2Q8NHP8 589 aa20.35■□□□□ 0.85
SHF-209ENST00000561091 TNNQ9UQP3 1299 aa20.35■□□□□ 0.85
SHF-209ENST00000561091 PTPRCP08575 1304 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 F6X3S4 739 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 ZPR1O75312 459 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 DDX58O95786 925 aaKnown RBP20.34■□□□□ 0.85
SHF-209ENST00000561091 RIC3Q7Z5B4 369 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 BCL2L12Q9HB09 334 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
SHF-209ENST00000561091 PLIN1O60240 522 aa20.33■□□□□ 0.85
SHF-209ENST00000561091 CENPBP07199 599 aaPredicted RBP20.33■□□□□ 0.85
SHF-209ENST00000561091 KSR2Q6VAB6 950 aa20.33■□□□□ 0.85
SHF-209ENST00000561091 N4BP2Q86UW6 1770 aaPredicted RBP20.33■□□□□ 0.84
SHF-209ENST00000561091 ERVV-1B6SEH8 477 aa20.32■□□□□ 0.84
SHF-209ENST00000561091 GYS1P13807 737 aa20.31■□□□□ 0.84
SHF-209ENST00000561091 ZKSCAN2Q63HK3 967 aa20.31■□□□□ 0.84
SHF-209ENST00000561091 IPO8O15397 1037 aaKnown RBP20.3■□□□□ 0.84
SHF-209ENST00000561091 TRIM27P14373 513 aa20.3■□□□□ 0.84
SHF-209ENST00000561091 FKBP8Q14318 412 aa20.3■□□□□ 0.84
SHF-209ENST00000561091 MSL1Q68DK7 614 aa20.3■□□□□ 0.84
SHF-209ENST00000561091 ATF7IPQ6VMQ6 1270 aa20.3■□□□□ 0.84
SHF-209ENST00000561091 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
SHF-209ENST00000561091 DNAAF4Q8WXU2 420 aa20.3■□□□□ 0.84
SHF-209ENST00000561091 ARHGAP45Q92619 1136 aa20.3■□□□□ 0.84
SHF-209ENST00000561091 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
SHF-209ENST00000561091 SLC4A10Q6U841 1118 aa20.29■□□□□ 0.84
SHF-209ENST00000561091 CLUAP1Q96AJ1 413 aa20.29■□□□□ 0.84
SHF-209ENST00000561091 MYD88Q99836 296 aa20.29■□□□□ 0.84
SHF-209ENST00000561091 METTL22Q9BUU2 404 aaPredicted RBP20.29■□□□□ 0.84
SHF-209ENST00000561091 SUPT16HQ9Y5B9 1047 aaKnown RBP20.29■□□□□ 0.84
SHF-209ENST00000561091 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
SHF-209ENST00000561091 GPTP24298 496 aa20.28■□□□□ 0.84
SHF-209ENST00000561091 TBC1D9BQ66K14 1250 aa20.28■□□□□ 0.84
SHF-209ENST00000561091 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
SHF-209ENST00000561091 ATP5J2-PTCD1G3V325 749 aa20.27■□□□□ 0.84
SHF-209ENST00000561091 RRP1P56182 461 aaKnown RBP20.27■□□□□ 0.84
SHF-209ENST00000561091 TCIRG1Q13488 830 aa20.27■□□□□ 0.84
SHF-209ENST00000561091 CLEC4GQ6UXB4 293 aa20.27■□□□□ 0.84
SHF-209ENST00000561091 BICDL1Q6ZP65 573 aa20.27■□□□□ 0.84
SHF-209ENST00000561091 ATP10DQ9P241 1426 aa20.27■□□□□ 0.83
SHF-209ENST00000561091 PXDNLA1KZ92 1463 aa20.26■□□□□ 0.83
SHF-209ENST00000561091 ABCC4O15439 1325 aa20.26■□□□□ 0.83
SHF-209ENST00000561091 RGL2O15211 777 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 ZBTB7AO95365 584 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 RLBP1P12271 317 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 NFIXQ14938 502 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 CWF19L2Q2TBE0 894 aaKnown RBP20.25■□□□□ 0.83
SHF-209ENST00000561091 HSP90AB3PQ58FF7 597 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.25■□□□□ 0.83
SHF-209ENST00000561091 NIP7Q9Y221 180 aaKnown RBP eCLIP20.25■□□□□ 0.83
SHF-209ENST00000561091 UBN2Q6ZU65 1347 aa20.25■□□□□ 0.83
SHF-209ENST00000561091 IGKV5-2P06315 115 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 NEXNQ0ZGT2 675 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 DZIP1LQ8IYY4 767 aaKnown RBP20.24■□□□□ 0.83
SHF-209ENST00000561091 NLGN1Q8N2Q7 840 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 PANK1Q8TE04 598 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 SLC16A10Q8TF71 515 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 ISCA1Q9BUE6 129 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 RNF123Q5XPI4 1314 aa20.24■□□□□ 0.83
SHF-209ENST00000561091 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
SHF-209ENST00000561091 FAM177BA6PVY3 158 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 TM4SF1P30408 202 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 TMEM57Q8N5G2 664 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 SETDB2Q96T68 719 aa20.22■□□□□ 0.83
SHF-209ENST00000561091 ATF5Q9Y2D1 282 aaPredicted RBP20.22■□□□□ 0.83
SHF-209ENST00000561091 DDR1Q08345 913 aa20.21■□□□□ 0.83
SHF-209ENST00000561091 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
SHF-209ENST00000561091 NRXN2Q9P2S2 1712 aa20.21■□□□□ 0.83
SHF-209ENST00000561091 MMP10P09238 476 aa20.2■□□□□ 0.82
SHF-209ENST00000561091 CCT4P50991 539 aaKnown RBP20.2■□□□□ 0.82
SHF-209ENST00000561091 SUSD4Q5VX71 490 aa20.2■□□□□ 0.82
SHF-209ENST00000561091 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
SHF-209ENST00000561091 MTFR1LQ9H019 292 aa20.2■□□□□ 0.82
SHF-209ENST00000561091 CARMIL3Q8ND23 1372 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms