RNA–Protein interactions for RNA: ENST00000561077.1

CCNB2-204, Transcript of cyclin B2, human

TSL 5

Gene CCNB2, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB2-204	ENST00000561077	HS3ST6	Q96QI5	342 aa		13.93	□□□□□ -0.18
CCNB2-204	ENST00000561077	ATG3	Q9NT62	314 aa		13.93	□□□□□ -0.18
CCNB2-204	ENST00000561077	CCDC87	Q9NVE4	849 aa		13.93	□□□□□ -0.18
CCNB2-204	ENST00000561077	ADAMTS7	Q9UKP4	1686 aa		13.93	□□□□□ -0.18
CCNB2-204	ENST00000561077	DLEC1	Q9Y238	1755 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	FCHSD2	O94868	740 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	GYS1	P13807	737 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	PHKG2	P15735	406 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	KCNA3	P22001	575 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	TMF1	P82094	1093 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	TRAPPC3L	Q5T215	181 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	C9orf131	Q5VYM1	1079 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	PLPP6	Q8IY26	295 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	RTCB	Q9Y3I0	505 aa	Known RBP	13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	TJP1	Q07157	1748 aa		13.92	□□□□□ -0.18
CCNB2-204	ENST00000561077	CNTNAP4	Q9C0A0	1308 aa		13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	TIAM2	Q8IVF5	1701 aa		13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	POTEB3	A0JP26	581 aa		13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	POTEB	Q6S5H4	581 aa		13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	IFNL2	Q8IZJ0	200 aa		13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	SLC4A9	Q96Q91	983 aa		13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.91	□□□□□ -0.18
CCNB2-204	ENST00000561077	KDM2B	Q8NHM5	1336 aa		13.9	□□□□□ -0.18
CCNB2-204	ENST00000561077	PRELP	P51888	382 aa		13.9	□□□□□ -0.18
CCNB2-204	ENST00000561077	RC3H1	Q5TC82	1133 aa	Known RBP	13.9	□□□□□ -0.18
CCNB2-204	ENST00000561077	ARHGEF1	Q92888	912 aa	Known RBP	13.9	□□□□□ -0.18
CCNB2-204	ENST00000561077	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CCNB2-204	ENST00000561077	DCAF5	Q96JK2	942 aa		13.9	□□□□□ -0.18
CCNB2-204	ENST00000561077	WASHC2A	Q641Q2	1341 aa		13.9	□□□□□ -0.19
CCNB2-204	ENST00000561077	TNS4	Q8IZW8	715 aa		13.89	□□□□□ -0.19
CCNB2-204	ENST00000561077	EYA1	Q99502	592 aa		13.89	□□□□□ -0.19
CCNB2-204	ENST00000561077	PARP3	Q9Y6F1	533 aa		13.89	□□□□□ -0.19
CCNB2-204	ENST00000561077	NRXN2	Q9P2S2	1712 aa		13.89	□□□□□ -0.19
CCNB2-204	ENST00000561077	KDM6A	O15550	1401 aa	Predicted RBP	13.89	□□□□□ -0.19
CCNB2-204	ENST00000561077	PIM2	Q9P1W9	311 aa		13.88	□□□□□ -0.19
CCNB2-204	ENST00000561077	PCDHGA4	Q9Y5G9	962 aa		13.88	□□□□□ -0.19
CCNB2-204	ENST00000561077	RPS6KA4	O75676	772 aa		13.87	□□□□□ -0.19
CCNB2-204	ENST00000561077	PDE4A	P27815	886 aa		13.87	□□□□□ -0.19
CCNB2-204	ENST00000561077	SPRYD3	Q8NCJ5	442 aa		13.87	□□□□□ -0.19
CCNB2-204	ENST00000561077	RNF181	Q9P0P0	153 aa		13.87	□□□□□ -0.19
CCNB2-204	ENST00000561077	AFDN	P55196	1824 aa	Known RBP	13.87	□□□□□ -0.19
CCNB2-204	ENST00000561077	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.87	□□□□□ -0.19
CCNB2-204	ENST00000561077	RFC4	P35249	363 aa		13.86	□□□□□ -0.19
CCNB2-204	ENST00000561077	SMC1B	Q8NDV3	1235 aa		13.86	□□□□□ -0.19
CCNB2-204	ENST00000561077	CARD14	Q9BXL6	1004 aa		13.86	□□□□□ -0.19
CCNB2-204	ENST00000561077	RRAGC	Q9HB90	399 aa		13.86	□□□□□ -0.19
CCNB2-204	ENST00000561077	ERVV-2	B6SEH9	535 aa		13.85	□□□□□ -0.19
CCNB2-204	ENST00000561077	DALRD3	Q5D0E6	543 aa	Known RBP	13.85	□□□□□ -0.19
CCNB2-204	ENST00000561077	PPP1R15B	Q5SWA1	713 aa		13.85	□□□□□ -0.19
CCNB2-204	ENST00000561077	USP42	Q9H9J4	1324 aa	Known RBP	13.85	□□□□□ -0.19
CCNB2-204	ENST00000561077	CCDC88A	Q3V6T2	1871 aa		13.84	□□□□□ -0.19
CCNB2-204	ENST00000561077	SCN11A	Q9UI33	1791 aa		13.84	□□□□□ -0.19
CCNB2-204	ENST00000561077	DDR1	Q08345	913 aa		13.84	□□□□□ -0.19
CCNB2-204	ENST00000561077	PPM1G	O15355	546 aa	Predicted RBP	13.83	□□□□□ -0.2
CCNB2-204	ENST00000561077	VARS2	Q5ST30	1063 aa	Known RBP	13.83	□□□□□ -0.2
CCNB2-204	ENST00000561077	PTCD2	Q8WV60	388 aa	Known RBP	13.83	□□□□□ -0.2
CCNB2-204	ENST00000561077	NUDT7	P0C024	238 aa		13.82	□□□□□ -0.2
CCNB2-204	ENST00000561077	HSPA1A	P0DMV8	641 aa	Known RBP	13.82	□□□□□ -0.2
CCNB2-204	ENST00000561077	HSPA1B	P0DMV9	641 aa	Known RBP	13.82	□□□□□ -0.2
CCNB2-204	ENST00000561077	CDCA8	Q53HL2	280 aa		13.82	□□□□□ -0.2
CCNB2-204	ENST00000561077	POLK	Q9UBT6	870 aa		13.82	□□□□□ -0.2
CCNB2-204	ENST00000561077	VIRMA	Q69YN4	1812 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	HSP90AB1	P08238	724 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	CHRNA5	P30532	468 aa		13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	CRKL	P46109	303 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	EIF4A2	Q14240	407 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	LARP6	Q9BRS8	491 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	SRP68	Q9UHB9	627 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	DICER1	Q9UPY3	1922 aa	Known RBP	13.81	□□□□□ -0.2
CCNB2-204	ENST00000561077	POLRMT	O00411	1230 aa	Known RBP	13.8	□□□□□ -0.2
CCNB2-204	ENST00000561077	RASSF7	Q02833	373 aa		13.8	□□□□□ -0.2
CCNB2-204	ENST00000561077	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.79	□□□□□ -0.2
CCNB2-204	ENST00000561077	GLTPD2	A6NH11	291 aa		13.79	□□□□□ -0.2
CCNB2-204	ENST00000561077	TM4SF1	P30408	202 aa		13.79	□□□□□ -0.2
CCNB2-204	ENST00000561077	MFSD10	Q14728	455 aa		13.79	□□□□□ -0.2
CCNB2-204	ENST00000561077	DDX27	Q96GQ7	796 aa	Known RBP	13.79	□□□□□ -0.2
CCNB2-204	ENST00000561077	CFAP44	Q96MT7	982 aa		13.79	□□□□□ -0.2
CCNB2-204	ENST00000561077	VEGFA	P15692	232 aa	Predicted RBP	13.78	□□□□□ -0.2
CCNB2-204	ENST00000561077	CABP4	P57796	275 aa		13.78	□□□□□ -0.2
CCNB2-204	ENST00000561077	CCER1	Q8TC90	406 aa	Predicted RBP	13.78	□□□□□ -0.2
CCNB2-204	ENST00000561077	FER1L6	Q2WGJ9	1857 aa		13.78	□□□□□ -0.2
CCNB2-204	ENST00000561077	LMNB1	P20700	586 aa		13.77	□□□□□ -0.21
CCNB2-204	ENST00000561077	MRC1	P22897	1456 aa		13.77	□□□□□ -0.21
CCNB2-204	ENST00000561077	ANKRD31	Q8N7Z5	1873 aa		13.77	□□□□□ -0.21
CCNB2-204	ENST00000561077	COL11A2	P13942	1736 aa	Predicted RBP	13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	CLSPN	Q9HAW4	1339 aa		13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	PTCD1	O75127	700 aa	Known RBP	13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	INTS5	Q6P9B9	1019 aa	Known RBP	13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	KRTAP3-3	Q9BYR6	98 aa		13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	KRTAP3-2	Q9BYR7	98 aa		13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	PCNT	O95613	3336 aa		13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	UBR2	Q8IWV8	1755 aa		13.76	□□□□□ -0.21
CCNB2-204	ENST00000561077	AMOT	Q4VCS5	1084 aa		13.75	□□□□□ -0.21
CCNB2-204	ENST00000561077	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.75	□□□□□ -0.21
CCNB2-204	ENST00000561077	SCN7A	Q01118	1682 aa		13.75	□□□□□ -0.21
CCNB2-204	ENST00000561077	ARFGEF2	Q9Y6D5	1785 aa		13.74	□□□□□ -0.21
CCNB2-204	ENST00000561077	SOS1	Q07889	1333 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms