RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 POTEJP0CG39 1038 aa25.08■■□□□ 1.61
TRIP4-211ENST00000560920 CNGB1Q14028 1251 aaPredicted RBP25.08■■□□□ 1.61
TRIP4-211ENST00000560920 CHADLQ6NUI6 762 aa25.08■■□□□ 1.61
TRIP4-211ENST00000560920 PRPF40BQ6NWY9 871 aaKnown RBP25.08■■□□□ 1.61
TRIP4-211ENST00000560920 USP16Q9Y5T5 823 aa25.08■■□□□ 1.61
TRIP4-211ENST00000560920 NPC1L1Q9UHC9 1359 aa25.07■■□□□ 1.6
TRIP4-211ENST00000560920 BTBD11A6QL63 1104 aa25.07■■□□□ 1.6
TRIP4-211ENST00000560920 NPM2Q86SE8 214 aaKnown RBP25.07■■□□□ 1.6
TRIP4-211ENST00000560920 DZIP3Q86Y13 1208 aaKnown RBP25.07■■□□□ 1.6
TRIP4-211ENST00000560920 MASTLQ96GX5 879 aa25.07■■□□□ 1.6
TRIP4-211ENST00000560920 PIP4K2AP48426 406 aaPredicted RBP25.06■■□□□ 1.6
TRIP4-211ENST00000560920 ST5P78524 1137 aa25.06■■□□□ 1.6
TRIP4-211ENST00000560920 NPHP1O15259 732 aa25.05■■□□□ 1.6
TRIP4-211ENST00000560920 C7orf43Q8WVR3 580 aa25.05■■□□□ 1.6
TRIP4-211ENST00000560920 CREBZFQ9NS37 354 aa25.05■■□□□ 1.6
TRIP4-211ENST00000560920 PRAMEF22A3QJZ6 481 aa25.04■■□□□ 1.6
TRIP4-211ENST00000560920 SOGA3Q5TF21 947 aa25.04■■□□□ 1.6
TRIP4-211ENST00000560920 CACNA1SQ13698 1873 aa25.04■■□□□ 1.6
TRIP4-211ENST00000560920 BCORQ6W2J9 1755 aa25.03■■□□□ 1.6
TRIP4-211ENST00000560920 PRKAR2BP31323 418 aa25.03■■□□□ 1.6
TRIP4-211ENST00000560920 RSPH6AQ9H0K4 717 aa25.03■■□□□ 1.6
TRIP4-211ENST00000560920 MKRN1Q9UHC7 482 aaKnown RBP25.03■■□□□ 1.6
TRIP4-211ENST00000560920 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
TRIP4-211ENST00000560920 ARFGEF2Q9Y6D5 1785 aa25.01■■□□□ 1.59
TRIP4-211ENST00000560920 NBPF5PQ86XG9 351 aaPredicted RBP25.01■■□□□ 1.59
TRIP4-211ENST00000560920 KLRG2A4D1S0 409 aaPredicted RBP24.99■■□□□ 1.59
TRIP4-211ENST00000560920 L3MBTL3Q96JM7 780 aaPredicted RBP24.99■■□□□ 1.59
TRIP4-211ENST00000560920 PASKQ96RG2 1323 aa24.98■■□□□ 1.59
TRIP4-211ENST00000560920 SNRPA1P09661 255 aaKnown RBP24.98■■□□□ 1.59
TRIP4-211ENST00000560920 NPR1P16066 1061 aa24.98■■□□□ 1.59
TRIP4-211ENST00000560920 CCDC93Q567U6 631 aa24.98■■□□□ 1.59
TRIP4-211ENST00000560920 TAF1DQ9H5J8 278 aaPredicted RBP24.98■■□□□ 1.59
TRIP4-211ENST00000560920 IQCA1LA6NCM1 817 aa24.97■■□□□ 1.59
TRIP4-211ENST00000560920 NBPF26B4DH59 902 aa24.97■■□□□ 1.59
TRIP4-211ENST00000560920 NBPF10Q6P3W6 841 aaKnown RBP24.97■■□□□ 1.59
TRIP4-211ENST00000560920 LDHDQ86WU2 507 aa24.97■■□□□ 1.59
TRIP4-211ENST00000560920 NBPF15Q8N660 670 aa24.97■■□□□ 1.59
TRIP4-211ENST00000560920 OLFM4Q6UX06 510 aa24.96■■□□□ 1.59
TRIP4-211ENST00000560920 MCM10Q7L590 875 aa24.96■■□□□ 1.59
TRIP4-211ENST00000560920 ZNF652Q9Y2D9 606 aa24.96■■□□□ 1.59
TRIP4-211ENST00000560920 FKBP4Q02790 459 aaKnown RBP eCLIP24.95■■□□□ 1.58
TRIP4-211ENST00000560920 TPTE2Q6XPS3 522 aa24.95■■□□□ 1.58
TRIP4-211ENST00000560920 ZNF277Q9NRM2 450 aaPredicted RBP24.95■■□□□ 1.58
TRIP4-211ENST00000560920 SCN4AP35499 1836 aa24.95■■□□□ 1.58
TRIP4-211ENST00000560920 CNTNAP1P78357 1384 aa24.94■■□□□ 1.58
TRIP4-211ENST00000560920 ZNF541Q9H0D2 1346 aa24.94■■□□□ 1.58
TRIP4-211ENST00000560920 ITGBL1O95965 494 aaPredicted RBP24.94■■□□□ 1.58
TRIP4-211ENST00000560920 CFAP53Q96M91 514 aa24.94■■□□□ 1.58
TRIP4-211ENST00000560920 NIP7Q9Y221 180 aaKnown RBP eCLIP24.94■■□□□ 1.58
TRIP4-211ENST00000560920 RGL2O15211 777 aa24.93■■□□□ 1.58
TRIP4-211ENST00000560920 FOXN1O15353 648 aa24.92■■□□□ 1.58
TRIP4-211ENST00000560920 DCTN1Q14203 1278 aa24.92■■□□□ 1.58
TRIP4-211ENST00000560920 RTF1Q92541 710 aaKnown RBP24.92■■□□□ 1.58
TRIP4-211ENST00000560920 FAM177BA6PVY3 158 aa24.91■■□□□ 1.58
TRIP4-211ENST00000560920 U2AF1L5P0DN76 240 aaPredicted RBP24.91■■□□□ 1.58
TRIP4-211ENST00000560920 U2AF1Q01081 240 aaKnown RBP eCLIP24.91■■□□□ 1.58
TRIP4-211ENST00000560920 HLFQ16534 295 aa24.91■■□□□ 1.58
TRIP4-211ENST00000560920 RTKN2Q8IZC4 609 aa24.91■■□□□ 1.58
TRIP4-211ENST00000560920 NUDCQ9Y266 331 aa24.91■■□□□ 1.58
TRIP4-211ENST00000560920 EAPPQ56P03 285 aaPredicted RBP24.9■■□□□ 1.58
TRIP4-211ENST00000560920 HACL1Q9UJ83 578 aa24.9■■□□□ 1.58
TRIP4-211ENST00000560920 TMEM88BA6NKF7 163 aa24.89■■□□□ 1.58
TRIP4-211ENST00000560920 VEGFBP49765 207 aa24.89■■□□□ 1.58
TRIP4-211ENST00000560920 SYNE4Q8N205 404 aa24.89■■□□□ 1.58
TRIP4-211ENST00000560920 HTATSF1O43719 755 aaKnown RBP24.88■■□□□ 1.57
TRIP4-211ENST00000560920 EPHX2P34913 555 aa24.88■■□□□ 1.57
TRIP4-211ENST00000560920 FZD9O00144 591 aa24.87■■□□□ 1.57
TRIP4-211ENST00000560920 ALDH1B1P30837 517 aa24.87■■□□□ 1.57
TRIP4-211ENST00000560920 IARSP41252 1262 aaKnown RBP24.87■■□□□ 1.57
TRIP4-211ENST00000560920 CLEC11AQ9Y240 323 aa24.87■■□□□ 1.57
TRIP4-211ENST00000560920 ADAMTSL1Q8N6G6 1762 aa24.86■■□□□ 1.57
TRIP4-211ENST00000560920 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
TRIP4-211ENST00000560920 TAF7Q15545 349 aaPredicted RBP24.86■■□□□ 1.57
TRIP4-211ENST00000560920 PRDM10Q9NQV6 1147 aa24.86■■□□□ 1.57
TRIP4-211ENST00000560920 MIS18AQ9NYP9 233 aa24.86■■□□□ 1.57
TRIP4-211ENST00000560920 SNED1Q8TER0 1413 aa24.85■■□□□ 1.57
TRIP4-211ENST00000560920 RNF123Q5XPI4 1314 aa24.85■■□□□ 1.57
TRIP4-211ENST00000560920 GTF2E1P29083 439 aaPredicted RBP24.84■■□□□ 1.57
TRIP4-211ENST00000560920 CRY2Q49AN0 593 aa24.83■■□□□ 1.57
TRIP4-211ENST00000560920 MAP1SQ66K74 1059 aaPredicted RBP24.83■■□□□ 1.57
TRIP4-211ENST00000560920 PNMA8AQ86V59 439 aaPredicted RBP24.83■■□□□ 1.57
TRIP4-211ENST00000560920 CNTROBQ8N137 903 aa24.83■■□□□ 1.57
TRIP4-211ENST00000560920 WBP1LQ9NX94 342 aa24.83■■□□□ 1.57
TRIP4-211ENST00000560920 CTCFP49711 727 aaPredicted RBP24.82■■□□□ 1.56
TRIP4-211ENST00000560920 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
TRIP4-211ENST00000560920 GPC2Q8N158 579 aa24.82■■□□□ 1.56
TRIP4-211ENST00000560920 PSMD1Q99460 953 aa24.82■■□□□ 1.56
TRIP4-211ENST00000560920 ABCC12Q96J65 1359 aa24.81■■□□□ 1.56
TRIP4-211ENST00000560920 NGEFQ8N5V2 710 aa24.81■■□□□ 1.56
TRIP4-211ENST00000560920 RASSF10A6NK89 507 aa24.8■■□□□ 1.56
TRIP4-211ENST00000560920 ERVV-1B6SEH8 477 aa24.8■■□□□ 1.56
TRIP4-211ENST00000560920 AIDAQ96BJ3 306 aa24.8■■□□□ 1.56
TRIP4-211ENST00000560920 NYXQ9GZU5 481 aa24.8■■□□□ 1.56
TRIP4-211ENST00000560920 COL4A5P29400 1685 aa24.79■■□□□ 1.56
TRIP4-211ENST00000560920 DEFB115Q30KQ5 88 aa24.79■■□□□ 1.56
TRIP4-211ENST00000560920 JDP2Q8WYK2 163 aa24.79■■□□□ 1.56
TRIP4-211ENST00000560920 HOXA10P31260 410 aaPredicted RBP24.78■■□□□ 1.56
TRIP4-211ENST00000560920 CC2D2BQ6DHV5 1058 aa24.78■■□□□ 1.56
TRIP4-211ENST00000560920 TTLL7Q6ZT98 887 aa24.78■■□□□ 1.56
TRIP4-211ENST00000560920 MAP3K15Q6ZN16 1313 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms