RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 USP19O94966 1318 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 NRKQ7Z2Y5 1582 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 AATKQ6ZMQ8 1374 aa7.45□□□□□ -1.22
ZEB1-220ENST00000560909 DDX17Q92841 729 aaKnown RBP7.44□□□□□ -1.22
ZEB1-220ENST00000560909 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
ZEB1-220ENST00000560909 INSRP06213 1382 aa7.44□□□□□ -1.22
ZEB1-220ENST00000560909 TRPM3Q9HCF6 1732 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-220ENST00000560909 TNS3Q68CZ2 1445 aa7.44□□□□□ -1.22
ZEB1-220ENST00000560909 CCER2I3L3R5 266 aa7.43□□□□□ -1.22
ZEB1-220ENST00000560909 ANP32CO43423 234 aa7.43□□□□□ -1.22
ZEB1-220ENST00000560909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.43□□□□□ -1.223e-6■■■■□ 22.7
ZEB1-220ENST00000560909 FAM160A2Q8N612 972 aaPredicted RBP7.43□□□□□ -1.22
ZEB1-220ENST00000560909 LRRC59Q96AG4 307 aaKnown RBP7.43□□□□□ -1.22
ZEB1-220ENST00000560909 GGNBP2Q9H3C7 697 aa7.43□□□□□ -1.22
ZEB1-220ENST00000560909 PRDM9Q9NQV7 894 aa7.43□□□□□ -1.22
ZEB1-220ENST00000560909 USP54Q70EL1 1684 aa7.43□□□□□ -1.22
ZEB1-220ENST00000560909 ARHGEF10O15013 1369 aa7.43□□□□□ -1.22
ZEB1-220ENST00000560909 NHSL1Q5SYE7 1610 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 PPP2R1AP30153 589 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 CC2D1BQ5T0F9 858 aaKnown RBP7.42□□□□□ -1.22
ZEB1-220ENST00000560909 RC3H1Q5TC82 1133 aaKnown RBP7.42□□□□□ -1.22
ZEB1-220ENST00000560909 MORC1Q86VD1 984 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 NLRP13Q86W25 1043 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 GPR161Q8N6U8 529 aaKnown RBP7.42□□□□□ -1.22
ZEB1-220ENST00000560909 ABTB2Q8N961 1025 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 COG3Q96JB2 828 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.42□□□□□ -1.22
ZEB1-220ENST00000560909 MYBBP1AQ9BQG0 1328 aaKnown RBP7.42□□□□□ -1.22
ZEB1-220ENST00000560909 PNPLA6Q8IY17 1366 aa7.42□□□□□ -1.22
ZEB1-220ENST00000560909 ROBO1Q9Y6N7 1651 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 DNAJB2P25686 324 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 XPCQ01831 940 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-220ENST00000560909 GOLGA2P5Q9HBQ8 144 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 POLKQ9UBT6 870 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 KIF24Q5T7B8 1368 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 SMG6Q86US8 1419 aaKnown RBP7.41□□□□□ -1.22
ZEB1-220ENST00000560909 SLIT3O75094 1523 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 MED1Q15648 1581 aaPredicted RBP7.41□□□□□ -1.22
ZEB1-220ENST00000560909 PIK3C2AO00443 1686 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 ALS2Q96Q42 1657 aa7.41□□□□□ -1.22
ZEB1-220ENST00000560909 GCP02774 474 aa7.4□□□□□ -1.22
ZEB1-220ENST00000560909 ARHGEF25Q86VW2 580 aa7.4□□□□□ -1.22
ZEB1-220ENST00000560909 KCNH5Q8NCM2 988 aa7.4□□□□□ -1.22
ZEB1-220ENST00000560909 CPDO75976 1380 aa7.4□□□□□ -1.22
ZEB1-220ENST00000560909 COL16A1Q07092 1604 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-220ENST00000560909 NFAT5O94916 1531 aa7.39□□□□□ -1.23
ZEB1-220ENST00000560909 SLC10A3P09131 477 aa7.39□□□□□ -1.23
ZEB1-220ENST00000560909 PIP4K2BP78356 416 aa7.39□□□□□ -1.23
ZEB1-220ENST00000560909 TMEM134Q9H6X4 195 aa7.39□□□□□ -1.23
ZEB1-220ENST00000560909 MARF1Q9Y4F3 1742 aaKnown RBP7.38□□□□□ -1.23
ZEB1-220ENST00000560909 MAP3K19Q56UN5 1328 aa7.38□□□□□ -1.23
ZEB1-220ENST00000560909 FURINP09958 794 aa7.38□□□□□ -1.23
ZEB1-220ENST00000560909 BAG6P46379 1132 aa7.38□□□□□ -1.23
ZEB1-220ENST00000560909 MTHFSP49914 203 aa7.38□□□□□ -1.23
ZEB1-220ENST00000560909 THAP11Q96EK4 314 aa7.38□□□□□ -1.23
ZEB1-220ENST00000560909 PURBQ96QR8 312 aaKnown RBP7.38□□□□□ -1.23
ZEB1-220ENST00000560909 RTL1A6NKG5 1358 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 JCADQ9P266 1359 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 FBLN1P23142 703 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 HSPA1LP34931 641 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 SCARF1Q14162 830 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 PDIA6Q15084 440 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 CCDC184Q52MB2 194 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 SPRYD3Q8NCJ5 442 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 PNISRQ8TF01 805 aaKnown RBP7.37□□□□□ -1.23
ZEB1-220ENST00000560909 FBXO41Q8TF61 875 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 IP6K1Q92551 441 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 COL25A1Q9BXS0 654 aaPredicted RBP7.37□□□□□ -1.23
ZEB1-220ENST00000560909 ANKRD26Q9UPS8 1709 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 COL22A1Q8NFW1 1626 aaPredicted RBP7.37□□□□□ -1.23
ZEB1-220ENST00000560909 ABCC6O95255 1503 aa7.37□□□□□ -1.23
ZEB1-220ENST00000560909 COL3A1P02461 1466 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-220ENST00000560909 MRPL14Q6P1L8 145 aaKnown RBP7.36□□□□□ -1.23
ZEB1-220ENST00000560909 EMILIN1Q9Y6C2 1016 aa7.36□□□□□ -1.23
ZEB1-220ENST00000560909 WASF2Q9Y6W5 498 aa7.36□□□□□ -1.23
ZEB1-220ENST00000560909 PHRF1Q9P1Y6 1649 aaKnown RBP7.36□□□□□ -1.23
ZEB1-220ENST00000560909 KIF20BQ96Q89 1820 aa7.36□□□□□ -1.23
ZEB1-220ENST00000560909 CDK12Q9NYV4 1490 aaPredicted RBP7.36□□□□□ -1.23
ZEB1-220ENST00000560909 FLT4P35916 1363 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 SPATA31A6Q5VVP1 1343 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 GRXCR2A6NFK2 248 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 HOXC9P31274 260 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 IL13P35225 146 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 RRS1Q15050 365 aaKnown RBP7.35□□□□□ -1.23
ZEB1-220ENST00000560909 CABLES1Q8TDN4 633 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 CRYBG1Q9Y4K1 1723 aa7.35□□□□□ -1.23
ZEB1-220ENST00000560909 KIAA0232Q92628 1395 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 FAM83GA6ND36 823 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 MAN1A2O60476 641 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 TNNT2P45379 298 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-220ENST00000560909 SKOR1P84550 965 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 HSP90AB2PQ58FF8 381 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 KRTAP4-2Q9BYR5 136 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 PHLPP1O60346 1717 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 BLMP54132 1417 aaPredicted RBP7.34□□□□□ -1.23
ZEB1-220ENST00000560909 NCAPD2Q15021 1401 aa7.34□□□□□ -1.23
ZEB1-220ENST00000560909 FMNL1O95466 1100 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms