RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CCDC93Q567U6 631 aa13.22□□□□□ -0.29
HERC1-210ENST00000560897 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
HERC1-210ENST00000560897 TESK2Q96S53 571 aa13.22□□□□□ -0.29
HERC1-210ENST00000560897 TRPM7Q96QT4 1865 aa13.22□□□□□ -0.29
HERC1-210ENST00000560897 SLX4Q8IY92 1834 aa13.22□□□□□ -0.29
HERC1-210ENST00000560897 A0A087WZG4 1122 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 AOC2O75106 756 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 ST5P78524 1137 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 BCL2L12Q9HB09 334 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 ARFGEF2Q9Y6D5 1785 aa13.21□□□□□ -0.29
HERC1-210ENST00000560897 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
HERC1-210ENST00000560897 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
HERC1-210ENST00000560897 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
HERC1-210ENST00000560897 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
HERC1-210ENST00000560897 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
HERC1-210ENST00000560897 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
HERC1-210ENST00000560897 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
HERC1-210ENST00000560897 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
HERC1-210ENST00000560897 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
HERC1-210ENST00000560897 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
HERC1-210ENST00000560897 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
HERC1-210ENST00000560897 GPC2Q8N158 579 aa13.19□□□□□ -0.3
HERC1-210ENST00000560897 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
HERC1-210ENST00000560897 TBC1D9BQ66K14 1250 aa13.18□□□□□ -0.3
HERC1-210ENST00000560897 NPM2Q86SE8 214 aaKnown RBP13.18□□□□□ -0.3
HERC1-210ENST00000560897 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
HERC1-210ENST00000560897 SRGNP10124 158 aa13.17□□□□□ -0.3
HERC1-210ENST00000560897 EIF6P56537 245 aaKnown RBP13.17□□□□□ -0.3
HERC1-210ENST00000560897 RTKN2Q8IZC4 609 aa13.17□□□□□ -0.3
HERC1-210ENST00000560897 NBPF15Q8N660 670 aa13.17□□□□□ -0.3
HERC1-210ENST00000560897 POLKQ9UBT6 870 aa13.17□□□□□ -0.3
HERC1-210ENST00000560897 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
HERC1-210ENST00000560897 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
HERC1-210ENST00000560897 SETDB2Q96T68 719 aa13.16□□□□□ -0.3
HERC1-210ENST00000560897 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
HERC1-210ENST00000560897 STARD3NLO95772 234 aa13.15□□□□□ -0.3
HERC1-210ENST00000560897 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
HERC1-210ENST00000560897 FMR1Q06787 632 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■□ 19.7
HERC1-210ENST00000560897 CIAPIN1Q6FI81 312 aa13.15□□□□□ -0.3
HERC1-210ENST00000560897 SCN7AQ01118 1682 aa13.15□□□□□ -0.31
HERC1-210ENST00000560897 FZD9O00144 591 aa13.14□□□□□ -0.31
HERC1-210ENST00000560897 TRAF5O00463 557 aa13.14□□□□□ -0.31
HERC1-210ENST00000560897 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
HERC1-210ENST00000560897 CST9Q5W186 159 aa13.14□□□□□ -0.31
HERC1-210ENST00000560897 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
HERC1-210ENST00000560897 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
HERC1-210ENST00000560897 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
HERC1-210ENST00000560897 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
HERC1-210ENST00000560897 SAPCD2Q86UD0 394 aa13.13□□□□□ -0.31
HERC1-210ENST00000560897 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
HERC1-210ENST00000560897 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
HERC1-210ENST00000560897 NPR1P16066 1061 aa13.12□□□□□ -0.31
HERC1-210ENST00000560897 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
HERC1-210ENST00000560897 NOGQ13253 232 aa13.12□□□□□ -0.31
HERC1-210ENST00000560897 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
HERC1-210ENST00000560897 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
HERC1-210ENST00000560897 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
HERC1-210ENST00000560897 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
HERC1-210ENST00000560897 CARD14Q9BXL6 1004 aa13.11□□□□□ -0.31
HERC1-210ENST00000560897 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
HERC1-210ENST00000560897 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
HERC1-210ENST00000560897 EPS15P42566 896 aa13.1□□□□□ -0.31
HERC1-210ENST00000560897 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
HERC1-210ENST00000560897 BCORQ6W2J9 1755 aa13.09□□□□□ -0.31
HERC1-210ENST00000560897 AEBP1Q8IUX7 1158 aa13.09□□□□□ -0.31
HERC1-210ENST00000560897 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
HERC1-210ENST00000560897 ALDH1B1P30837 517 aa13.08□□□□□ -0.32
HERC1-210ENST00000560897 SCNN1DP51172 638 aa13.08□□□□□ -0.32
HERC1-210ENST00000560897 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
HERC1-210ENST00000560897 OLFM4Q6UX06 510 aa13.08□□□□□ -0.32
HERC1-210ENST00000560897 MRC1P22897 1456 aa13.08□□□□□ -0.32
HERC1-210ENST00000560897 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
HERC1-210ENST00000560897 HABP4Q5JVS0 413 aaKnown RBP13.07□□□□□ -0.32
HERC1-210ENST00000560897 CTU1Q7Z7A3 348 aaKnown RBP13.07□□□□□ -0.32
HERC1-210ENST00000560897 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
HERC1-210ENST00000560897 PSMD1Q99460 953 aa13.07□□□□□ -0.32
HERC1-210ENST00000560897 TEX13AQ9BXU3 409 aaPredicted RBP13.07□□□□□ -0.32
HERC1-210ENST00000560897 ADARB2Q9NS39 739 aaKnown RBP13.07□□□□□ -0.32
HERC1-210ENST00000560897 AKAP11Q9UKA4 1901 aa13.06□□□□□ -0.32
HERC1-210ENST00000560897 RNMTO43148 476 aaKnown RBP13.06□□□□□ -0.32
HERC1-210ENST00000560897 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
HERC1-210ENST00000560897 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
HERC1-210ENST00000560897 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
HERC1-210ENST00000560897 HUNKP57058 714 aa13.05□□□□□ -0.32
HERC1-210ENST00000560897 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
HERC1-210ENST00000560897 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
HERC1-210ENST00000560897 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
HERC1-210ENST00000560897 CC2D2BQ6DHV5 1058 aa13.04□□□□□ -0.32
HERC1-210ENST00000560897 TPTE2Q6XPS3 522 aa13.04□□□□□ -0.32
HERC1-210ENST00000560897 DZIP3Q86Y13 1208 aaKnown RBP13.04□□□□□ -0.32
HERC1-210ENST00000560897 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
HERC1-210ENST00000560897 TRPA1O75762 1119 aa13.03□□□□□ -0.32
HERC1-210ENST00000560897 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
HERC1-210ENST00000560897 ZIC5Q96T25 663 aa13.03□□□□□ -0.32
HERC1-210ENST00000560897 GPRC5DQ9NZD1 345 aa13.03□□□□□ -0.32
HERC1-210ENST00000560897 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
HERC1-210ENST00000560897 GRIPAP1Q4V328 841 aa13.02□□□□□ -0.33
HERC1-210ENST00000560897 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms