RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NCOA1Q15788 1441 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 KIF3CO14782 793 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 GNL2Q13823 731 aaKnown RBP8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 RNPC3Q96LT9 517 aaKnown RBP8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 MPHOSPH9Q99550 1183 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 ABCC2Q92887 1545 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 ARHGEF5Q12774 1597 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 PRC1O43663 620 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 BDNFP23560 247 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 FERMT3Q86UX7 667 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 SRPK1Q96SB4 655 aaKnown RBP8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 NEUROD4Q9HD90 331 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 CDC42BPBQ9Y5S2 1711 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 PREX2Q70Z35 1606 aa8.31□□□□□ -1.08
TSPAN3-209ENST00000560715 PPP4R3BQ5MIZ7 849 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 OFD1O75665 1012 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 SOX11P35716 441 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 PSMD2Q13200 908 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 MAMSTRQ6ZN01 415 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 RDH13Q8NBN7 331 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 PHF12Q96QT6 1004 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 KCNG1Q9UIX4 513 aa8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 ISY1Q9ULR0 285 aaKnown RBP8.3□□□□□ -1.08
TSPAN3-209ENST00000560715 KDM5BQ9UGL1 1544 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 C10orf62Q5T681 223 aaPredicted RBP8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 ERCC6L2Q5T890 1561 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 TRIM44Q96DX7 344 aaPredicted RBP8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 GMLQ99445 158 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 FANCLQ9NW38 375 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 FAM13BQ9NYF5 915 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 SFMBT1Q9UHJ3 866 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 ANKRD30AQ9BXX3 1397 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 FGRP09769 529 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 AKT1S1Q96B36 256 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 IL17RAQ96F46 866 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 EID1Q9Y6B2 187 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 CCDC7Q96M83 1385 aa8.29□□□□□ -1.08
TSPAN3-209ENST00000560715 F6X3S4 739 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 LZTS3O60299 673 aaPredicted RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 TNNT2P45379 298 aaPredicted RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 SKAP1Q86WV1 359 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 JAMLQ86YT9 394 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 UHRF1BP1LA0JNW5 1464 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 FAM221BA6H8Z2 402 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 KIF20AO95235 890 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 LDHAP00338 332 aaKnown RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 CACNB1Q02641 598 aaPredicted RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 USP48Q86UV5 1035 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 FTSJ3Q8IY81 847 aaKnown RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 MRFAP1L1Q96HT8 127 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 GRPEL1Q9HAV7 217 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 RCAN3Q9UKA8 241 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 ZSCAN20P17040 1043 aaPredicted RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 GYS2P54840 703 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 SLC43A3Q8NBI5 491 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 NLRP2Q9NX02 1062 aa8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 MAP3K20Q9NYL2 800 aaKnown RBP8.28□□□□□ -1.08
TSPAN3-209ENST00000560715 KTN1Q86UP2 1357 aaKnown RBP8.27□□□□□ -1.08
TSPAN3-209ENST00000560715 MYO5CQ9NQX4 1742 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 FKBP4Q02790 459 aaKnown RBP eCLIP8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 KLF15Q9UIH9 416 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 ANKRD30BQ9BXX2 1392 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 SAMD9LQ8IVG5 1584 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 HCLS1P14317 486 aaPredicted RBP8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 NR1H3Q13133 447 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 PRPF38AQ8NAV1 312 aaKnown RBP8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 ANTXR1Q9H6X2 564 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 C9orf84Q5VXU9 1444 aa8.27□□□□□ -1.09
TSPAN3-209ENST00000560715 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 BECN1Q14457 450 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 TPCN2Q8NHX9 752 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 PZPP20742 1482 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 ZCCHC11Q5TAX3 1644 aaKnown RBP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 EIF3JO75822 258 aaKnown RBP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 MTMR2Q13614 643 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 CCAR1Q8IX12 1150 aaKnown RBP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 GTPBP4Q9BZE4 634 aaKnown RBP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 KDM2BQ8NHM5 1336 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 RPRD2Q5VT52 1461 aaKnown RBP8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 MBD5Q9P267 1494 aa8.26□□□□□ -1.09
TSPAN3-209ENST00000560715 TTC37Q6PGP7 1564 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 MPSTP25325 297 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 SWI5Q1ZZU3 235 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 ANP32BQ92688 251 aaKnown RBP8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 ARPC5LQ9BPX5 153 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 HINFPQ9BQA5 517 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 ANKRD50Q9ULJ7 1429 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms