RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 STARD3NLO95772 234 aa13.52□□□□□ -0.25
TPM1-225ENST00000560679 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
TPM1-225ENST00000560679 CNKSR1Q969H4 720 aa13.52□□□□□ -0.25
TPM1-225ENST00000560679 ABHD8Q96I13 439 aa13.52□□□□□ -0.25
TPM1-225ENST00000560679 LTBP1Q14766 1721 aa13.51□□□□□ -0.25
TPM1-225ENST00000560679 RASSF10A6NK89 507 aa13.51□□□□□ -0.25
TPM1-225ENST00000560679 SNED1Q8TER0 1413 aa13.5□□□□□ -0.25
TPM1-225ENST00000560679 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
TPM1-225ENST00000560679 EAPPQ56P03 285 aaPredicted RBP13.5□□□□□ -0.25
TPM1-225ENST00000560679 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
TPM1-225ENST00000560679 SOGA3Q5TF21 947 aa13.5□□□□□ -0.25
TPM1-225ENST00000560679 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
TPM1-225ENST00000560679 MASTLQ96GX5 879 aa13.5□□□□□ -0.25
TPM1-225ENST00000560679 ZNF330Q9Y3S2 320 aaPredicted RBP13.5□□□□□ -0.25
TPM1-225ENST00000560679 COL4A5P29400 1685 aa13.5□□□□□ -0.25
TPM1-225ENST00000560679 COL3A1P02461 1466 aaPredicted RBP13.49□□□□□ -0.25
TPM1-225ENST00000560679 ST5P78524 1137 aa13.49□□□□□ -0.25
TPM1-225ENST00000560679 CCDC93Q567U6 631 aa13.49□□□□□ -0.25
TPM1-225ENST00000560679 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
TPM1-225ENST00000560679 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
TPM1-225ENST00000560679 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
TPM1-225ENST00000560679 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
TPM1-225ENST00000560679 A1BGP04217 495 aa13.48□□□□□ -0.25
TPM1-225ENST00000560679 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
TPM1-225ENST00000560679 EPHX2P34913 555 aa13.48□□□□□ -0.25
TPM1-225ENST00000560679 MAP1SQ66K74 1059 aaPredicted RBP13.48□□□□□ -0.25
TPM1-225ENST00000560679 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
TPM1-225ENST00000560679 HACL1Q9UJ83 578 aa13.48□□□□□ -0.25
TPM1-225ENST00000560679 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
TPM1-225ENST00000560679 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
TPM1-225ENST00000560679 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
TPM1-225ENST00000560679 DEFB115Q30KQ5 88 aa13.46□□□□□ -0.25
TPM1-225ENST00000560679 CNTROBQ8N137 903 aa13.46□□□□□ -0.25
TPM1-225ENST00000560679 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.25
TPM1-225ENST00000560679 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 TNRC18O15417 2968 aaPredicted RBP13.45□□□□□ -0.26
TPM1-225ENST00000560679 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
TPM1-225ENST00000560679 FZD9O00144 591 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 NPHP1O15259 732 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 KCNQ3O43525 872 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 NPR1P16066 1061 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
TPM1-225ENST00000560679 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
TPM1-225ENST00000560679 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
TPM1-225ENST00000560679 TIMELESSQ9UNS1 1208 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
TPM1-225ENST00000560679 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM1-225ENST00000560679 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
TPM1-225ENST00000560679 FMR1Q06787 632 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM1-225ENST00000560679 TEFQ10587 303 aa13.44□□□□□ -0.26
TPM1-225ENST00000560679 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
TPM1-225ENST00000560679 PRAMEF22A3QJZ6 481 aa13.43□□□□□ -0.26
TPM1-225ENST00000560679 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
TPM1-225ENST00000560679 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
TPM1-225ENST00000560679 PNMA8AQ86V59 439 aaPredicted RBP13.43□□□□□ -0.26
TPM1-225ENST00000560679 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
TPM1-225ENST00000560679 DDX21Q9NR30 783 aaKnown RBP eCLIP13.43□□□□□ -0.26
TPM1-225ENST00000560679 ABT1Q9ULW3 272 aaKnown RBP13.43□□□□□ -0.26
TPM1-225ENST00000560679 TRPM7Q96QT4 1865 aa13.42□□□□□ -0.26
TPM1-225ENST00000560679 GNAT3A8MTJ3 354 aa13.42□□□□□ -0.26
TPM1-225ENST00000560679 RGS19P49795 217 aa13.42□□□□□ -0.26
TPM1-225ENST00000560679 SLC51AQ86UW1 340 aa13.42□□□□□ -0.26
TPM1-225ENST00000560679 GPC2Q8N158 579 aa13.42□□□□□ -0.26
TPM1-225ENST00000560679 ABCC12Q96J65 1359 aa13.42□□□□□ -0.26
TPM1-225ENST00000560679 MLLT1Q03111 559 aaPredicted RBP13.41□□□□□ -0.26
TPM1-225ENST00000560679 CYP4F22Q6NT55 531 aa13.41□□□□□ -0.26
TPM1-225ENST00000560679 CLEC4GQ6UXB4 293 aa13.41□□□□□ -0.26
TPM1-225ENST00000560679 RTKN2Q8IZC4 609 aa13.41□□□□□ -0.26
TPM1-225ENST00000560679 SYNE4Q8N205 404 aa13.41□□□□□ -0.26
TPM1-225ENST00000560679 CAPNS2Q96L46 248 aa13.41□□□□□ -0.26
TPM1-225ENST00000560679 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
TPM1-225ENST00000560679 CCDC85CA6NKD9 419 aa13.4□□□□□ -0.26
TPM1-225ENST00000560679 SCNN1DP51172 638 aa13.4□□□□□ -0.26
TPM1-225ENST00000560679 GAS2L2Q8NHY3 880 aa13.4□□□□□ -0.26
TPM1-225ENST00000560679 LAMB4A4D0S4 1761 aa13.4□□□□□ -0.26
TPM1-225ENST00000560679 CST9Q5W186 159 aa13.39□□□□□ -0.27
TPM1-225ENST00000560679 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
TPM1-225ENST00000560679 PSMD1Q99460 953 aa13.39□□□□□ -0.27
TPM1-225ENST00000560679 TSKSQ9UJT2 592 aa13.39□□□□□ -0.27
TPM1-225ENST00000560679 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
TPM1-225ENST00000560679 ZNF652Q9Y2D9 606 aa13.39□□□□□ -0.27
TPM1-225ENST00000560679 BTBD11A6QL63 1104 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 TRAF5O00463 557 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 EPS15P42566 896 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 CRY2Q49AN0 593 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
TPM1-225ENST00000560679 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
TPM1-225ENST00000560679 FAM177BA6PVY3 158 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
TPM1-225ENST00000560679 AOC2O75106 756 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 GRM1Q13255 1194 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 HLFQ16534 295 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 PHACTR3Q96KR7 559 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 GPR101Q96P66 508 aaPredicted RBP13.37□□□□□ -0.27
TPM1-225ENST00000560679 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
TPM1-225ENST00000560679 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms