RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
TRAF3-209ENST00000560463 MAP3K2Q9Y2U5 619 aa10.84□□□□□ -0.67
TRAF3-209ENST00000560463 LAMB2P55268 1798 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 SCN7AQ01118 1682 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 IL6STP40189 918 aaPredicted RBP10.83□□□□□ -0.68
TRAF3-209ENST00000560463 AIMP1Q12904 312 aaKnown RBP10.83□□□□□ -0.68
TRAF3-209ENST00000560463 BEND3Q5T5X7 828 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 LINS1Q8NG48 757 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 PLBD2Q8NHP8 589 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 HDAC5Q9UQL6 1122 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 PCDHB15Q9Y5E8 787 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
TRAF3-209ENST00000560463 HDAC1Q13547 482 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-209ENST00000560463 NPM2Q86SE8 214 aaKnown RBP10.82□□□□□ -0.68
TRAF3-209ENST00000560463 RPAP2Q8IXW5 612 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-209ENST00000560463 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
TRAF3-209ENST00000560463 AK9Q5TCS8 1911 aa10.82□□□□□ -0.68
TRAF3-209ENST00000560463 GNAI2P04899 355 aa10.81□□□□□ -0.68
TRAF3-209ENST00000560463 FAM182BQ5T319 152 aa10.81□□□□□ -0.68
TRAF3-209ENST00000560463 CCDC87Q9NVE4 849 aa10.81□□□□□ -0.68
TRAF3-209ENST00000560463 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
TRAF3-209ENST00000560463 TUBGCP6Q96RT7 1819 aa10.81□□□□□ -0.68
TRAF3-209ENST00000560463 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
TRAF3-209ENST00000560463 PIP4K2AP48426 406 aaPredicted RBP10.8□□□□□ -0.68
TRAF3-209ENST00000560463 RC3H1Q5TC82 1133 aaKnown RBP10.8□□□□□ -0.68
TRAF3-209ENST00000560463 KIF6Q6ZMV9 814 aa10.8□□□□□ -0.68
TRAF3-209ENST00000560463 MEIS3Q99687 375 aa10.8□□□□□ -0.68
TRAF3-209ENST00000560463 USP44Q9H0E7 712 aa10.8□□□□□ -0.68
TRAF3-209ENST00000560463 UTYO14607 1347 aa10.8□□□□□ -0.68
TRAF3-209ENST00000560463 IGHDP01880 384 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 UBTFL1P0CB47 393 aaPredicted RBP10.79□□□□□ -0.68
TRAF3-209ENST00000560463 CRKLP46109 303 aaKnown RBP10.79□□□□□ -0.68
TRAF3-209ENST00000560463 EIF5P55010 431 aaKnown RBP10.79□□□□□ -0.68
TRAF3-209ENST00000560463 ITPK1Q13572 414 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 MYD88Q99836 296 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 ZBTB1Q9Y2K1 713 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 MAP3K15Q6ZN16 1313 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 CNTNAP4Q9C0A0 1308 aa10.79□□□□□ -0.68
TRAF3-209ENST00000560463 DDX60Q8IY21 1712 aaKnown RBP10.78□□□□□ -0.68
TRAF3-209ENST00000560463 NEURL1BA8MQ27 555 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 ERVV-1B6SEH8 477 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 HMMRO75330 724 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 HSP90AB3PQ58FF7 597 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
TRAF3-209ENST00000560463 POTEAQ6S8J7 498 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 TTLL7Q6ZT98 887 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 PTF1AQ7RTS3 328 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 GCC1Q96CN9 775 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 C9orf78Q9NZ63 289 aaPredicted RBP10.78□□□□□ -0.68
TRAF3-209ENST00000560463 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
TRAF3-209ENST00000560463 COL24A1Q17RW2 1714 aa10.78□□□□□ -0.68
TRAF3-209ENST00000560463 COL15A1P39059 1388 aa10.77□□□□□ -0.68
TRAF3-209ENST00000560463 A0A087WZG4 1122 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 GRM8O00222 908 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 RGL2O15211 777 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 IGKV5-2P06315 115 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 TRIM28Q13263 835 aaKnown RBP10.77□□□□□ -0.69
TRAF3-209ENST00000560463 GCKRQ14397 625 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 CWF19L2Q2TBE0 894 aaKnown RBP10.77□□□□□ -0.69
TRAF3-209ENST00000560463 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 CEP85Q6P2H3 762 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 GIGYF2Q6Y7W6 1299 aaKnown RBP10.77□□□□□ -0.69
TRAF3-209ENST00000560463 SMC5Q8IY18 1101 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 C1orf115Q9H7X2 142 aa10.77□□□□□ -0.69
TRAF3-209ENST00000560463 PLSCR1O15162 318 aa10.76□□□□□ -0.69
TRAF3-209ENST00000560463 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
TRAF3-209ENST00000560463 TCIRG1Q13488 830 aa10.76□□□□□ -0.69
TRAF3-209ENST00000560463 DZIP3Q86Y13 1208 aaKnown RBP10.76□□□□□ -0.69
TRAF3-209ENST00000560463 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
TRAF3-209ENST00000560463 ZBTB3Q9H5J0 574 aa10.76□□□□□ -0.69
TRAF3-209ENST00000560463 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
TRAF3-209ENST00000560463 SPEF2Q9C093 1822 aa10.75□□□□□ -0.69
TRAF3-209ENST00000560463 RPS6KA4O75676 772 aa10.75□□□□□ -0.69
TRAF3-209ENST00000560463 TRIM37O94972 964 aa10.75□□□□□ -0.69
TRAF3-209ENST00000560463 NBPF7P0C2Y1 421 aaPredicted RBP10.75□□□□□ -0.69
TRAF3-209ENST00000560463 SIRT2Q8IXJ6 389 aa10.75□□□□□ -0.69
TRAF3-209ENST00000560463 ISCA1Q9BUE6 129 aa10.75□□□□□ -0.69
TRAF3-209ENST00000560463 CWC25Q9NXE8 425 aaPredicted RBP10.75□□□□□ -0.69
TRAF3-209ENST00000560463 LRRFIP2Q9Y608 721 aaKnown RBP10.75□□□□□ -0.69
TRAF3-209ENST00000560463 MTX1Q13505 466 aa10.74□□□□□ -0.69
TRAF3-209ENST00000560463 ARXQ96QS3 562 aa10.74□□□□□ -0.69
TRAF3-209ENST00000560463 DCTPP1Q9H773 170 aa10.74□□□□□ -0.69
TRAF3-209ENST00000560463 ZNF652Q9Y2D9 606 aa10.74□□□□□ -0.69
TRAF3-209ENST00000560463 ATP5J2-PTCD1G3V325 749 aa10.73□□□□□ -0.69
TRAF3-209ENST00000560463 CLEC4GQ6UXB4 293 aa10.73□□□□□ -0.69
TRAF3-209ENST00000560463 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
TRAF3-209ENST00000560463 RTCBQ9Y3I0 505 aaKnown RBP10.73□□□□□ -0.69
TRAF3-209ENST00000560463 H7C1W4 665 aa10.72□□□□□ -0.69
TRAF3-209ENST00000560463 HLFQ16534 295 aa10.72□□□□□ -0.69
TRAF3-209ENST00000560463 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
TRAF3-209ENST00000560463 TBC1D2BQ9UPU7 963 aa10.72□□□□□ -0.69
TRAF3-209ENST00000560463 A0A1B0GUL6 1792 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 CAMTA2O94983 1202 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 APBA3O96018 575 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 PCCAP05165 728 aaPredicted RBP10.71□□□□□ -0.69
TRAF3-209ENST00000560463 CASP7P55210 303 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 NUCB1Q02818 461 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 POLA2Q14181 598 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms