RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 BARGINQ6ZT62 677 aa29.41■■■□□ 2.3
PIF1-208ENST00000560444 ERICH6Q7L0X2 663 aa29.41■■■□□ 2.3
PIF1-208ENST00000560444 TBC1D32Q96NH3 1257 aa29.41■■■□□ 2.3
PIF1-208ENST00000560444 MYD88Q99836 296 aa29.41■■■□□ 2.3
PIF1-208ENST00000560444 GCKRQ14397 625 aa29.4■■■□□ 2.3
PIF1-208ENST00000560444 VPS72Q15906 364 aa29.4■■■□□ 2.3
PIF1-208ENST00000560444 ATG3Q9NT62 314 aa29.4■■■□□ 2.3
PIF1-208ENST00000560444 WNK3Q9BYP7 1800 aa29.4■■■□□ 2.3
PIF1-208ENST00000560444 BCL9O00512 1426 aa29.39■■■□□ 2.3
PIF1-208ENST00000560444 DDB1Q16531 1140 aa29.38■■■□□ 2.29
PIF1-208ENST00000560444 ASAP1Q9ULH1 1129 aa29.38■■■□□ 2.29
PIF1-208ENST00000560444 AFF2P51816 1311 aa29.38■■■□□ 2.29
PIF1-208ENST00000560444 SURF6O75683 361 aaKnown RBP29.38■■■□□ 2.29
PIF1-208ENST00000560444 GSPT1P15170 499 aaKnown RBP29.38■■■□□ 2.29
PIF1-208ENST00000560444 PIP4K2AP48426 406 aaPredicted RBP29.38■■■□□ 2.29
PIF1-208ENST00000560444 A1BGP04217 495 aa29.37■■■□□ 2.29
PIF1-208ENST00000560444 OTUD7AQ8TE49 926 aaPredicted RBP29.37■■■□□ 2.29
PIF1-208ENST00000560444 CDC45O75419 566 aa29.36■■■□□ 2.29
PIF1-208ENST00000560444 PDE1AP54750 535 aa29.35■■■□□ 2.29
PIF1-208ENST00000560444 KIF1BPQ96EK5 621 aa29.35■■■□□ 2.29
PIF1-208ENST00000560444 SALL3Q9BXA9 1300 aa29.35■■■□□ 2.29
PIF1-208ENST00000560444 STARD3NLO95772 234 aa29.34■■■□□ 2.29
PIF1-208ENST00000560444 SUCLG2Q96I99 432 aa29.34■■■□□ 2.29
PIF1-208ENST00000560444 FBXO41Q8TF61 875 aa29.34■■■□□ 2.29
PIF1-208ENST00000560444 COL15A1P39059 1388 aa29.33■■■□□ 2.29
PIF1-208ENST00000560444 MFAP1P55081 439 aaKnown RBP29.33■■■□□ 2.29
PIF1-208ENST00000560444 STAP2Q9UGK3 403 aa29.33■■■□□ 2.29
PIF1-208ENST00000560444 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.32■■■□□ 2.28
PIF1-208ENST00000560444 TBC1D9Q6ZT07 1266 aa29.32■■■□□ 2.28
PIF1-208ENST00000560444 RHPN1Q8TCX5 695 aa29.32■■■□□ 2.28
PIF1-208ENST00000560444 KAZALD1Q96I82 304 aa29.32■■■□□ 2.28
PIF1-208ENST00000560444 C22orf23Q9BZE7 217 aa29.32■■■□□ 2.28
PIF1-208ENST00000560444 FAM98CQ17RN3 349 aaKnown RBP29.31■■■□□ 2.28
PIF1-208ENST00000560444 ITGB4P16144 1822 aa29.31■■■□□ 2.28
PIF1-208ENST00000560444 AOX1Q06278 1338 aa29.31■■■□□ 2.28
PIF1-208ENST00000560444 BICC1Q9H694 974 aaKnown RBP29.31■■■□□ 2.28
PIF1-208ENST00000560444 MX1P20591 662 aa29.3■■■□□ 2.28
PIF1-208ENST00000560444 TTLL7Q6ZT98 887 aa29.3■■■□□ 2.28
PIF1-208ENST00000560444 ERC1Q8IUD2 1116 aa29.3■■■□□ 2.28
PIF1-208ENST00000560444 DNAJC10Q8IXB1 793 aa29.3■■■□□ 2.28
PIF1-208ENST00000560444 RBM42Q9BTD8 480 aaKnown RBP29.3■■■□□ 2.28
PIF1-208ENST00000560444 BCL11AQ9H165 835 aa29.3■■■□□ 2.28
PIF1-208ENST00000560444 DAXXQ9UER7 740 aaPredicted RBP29.3■■■□□ 2.28
PIF1-208ENST00000560444 PRIM1P49642 420 aaKnown RBP29.29■■■□□ 2.28
PIF1-208ENST00000560444 SDSP20132 328 aa29.28■■■□□ 2.28
PIF1-208ENST00000560444 ARFGEF2Q9Y6D5 1785 aa29.28■■■□□ 2.28
PIF1-208ENST00000560444 CASC1Q6TDU7 716 aa29.27■■■□□ 2.28
PIF1-208ENST00000560444 SYTL4Q96C24 671 aaPredicted RBP29.27■■■□□ 2.28
PIF1-208ENST00000560444 MARCH10Q8NA82 808 aaPredicted RBP29.26■■■□□ 2.27
PIF1-208ENST00000560444 A0A087WZG4 1122 aa29.25■■■□□ 2.27
PIF1-208ENST00000560444 ATP5J2-PTCD1G3V325 749 aa29.25■■■□□ 2.27
PIF1-208ENST00000560444 RBM25P49756 843 aaKnown RBP29.25■■■□□ 2.27
PIF1-208ENST00000560444 CCDC191Q8NCU4 936 aa29.25■■■□□ 2.27
PIF1-208ENST00000560444 OS9Q13438 667 aaPredicted RBP29.24■■■□□ 2.27
PIF1-208ENST00000560444 CWC25Q9NXE8 425 aaPredicted RBP29.24■■■□□ 2.27
PIF1-208ENST00000560444 TRPC5Q9UL62 973 aaPredicted RBP29.24■■■□□ 2.27
PIF1-208ENST00000560444 H7C1W4 665 aa29.23■■■□□ 2.27
PIF1-208ENST00000560444 BECN1Q14457 450 aa29.23■■■□□ 2.27
PIF1-208ENST00000560444 GJD4Q96KN9 370 aaPredicted RBP29.23■■■□□ 2.27
PIF1-208ENST00000560444 IL1RAPL2Q9NP60 686 aa29.23■■■□□ 2.27
PIF1-208ENST00000560444 A0A0G2JS52 829 aa29.23■■■□□ 2.27
PIF1-208ENST00000560444 CYP19A1P11511 503 aaPredicted RBP29.23■■■□□ 2.27
PIF1-208ENST00000560444 MYT1Q01538 1121 aa29.23■■■□□ 2.27
PIF1-208ENST00000560444 RABL6Q3YEC7 729 aaPredicted RBP29.23■■■□□ 2.27
PIF1-208ENST00000560444 ATRNO75882 1429 aa29.23■■■□□ 2.27
PIF1-208ENST00000560444 CASP7P55210 303 aa29.22■■■□□ 2.27
PIF1-208ENST00000560444 KIF6Q6ZMV9 814 aa29.22■■■□□ 2.27
PIF1-208ENST00000560444 G3BP1Q13283 466 aaKnown RBP eCLIP29.21■■■□□ 2.27
PIF1-208ENST00000560444 UBE3BQ7Z3V4 1068 aa29.21■■■□□ 2.27
PIF1-208ENST00000560444 CLASRPQ8N2M8 674 aaKnown RBP29.21■■■□□ 2.27
PIF1-208ENST00000560444 SLC4A9Q96Q91 983 aa29.21■■■□□ 2.27
PIF1-208ENST00000560444 TRIM28Q13263 835 aaKnown RBP29.2■■■□□ 2.27
PIF1-208ENST00000560444 ZBTB3Q9H5J0 574 aa29.2■■■□□ 2.27
PIF1-208ENST00000560444 QTRT2Q9H974 415 aaKnown RBP29.2■■■□□ 2.27
PIF1-208ENST00000560444 NUP188Q5SRE5 1749 aa29.2■■■□□ 2.26
PIF1-208ENST00000560444 TCIRG1Q13488 830 aa29.2■■■□□ 2.26
PIF1-208ENST00000560444 ISCA1Q9BUE6 129 aa29.2■■■□□ 2.26
PIF1-208ENST00000560444 USP42Q9H9J4 1324 aaKnown RBP29.19■■■□□ 2.26
PIF1-208ENST00000560444 EPHA10Q5JZY3 1008 aa29.19■■■□□ 2.26
PIF1-208ENST00000560444 DOT1LQ8TEK3 1739 aa29.18■■■□□ 2.26
PIF1-208ENST00000560444 COPRSQ9NQ92 184 aa29.18■■■□□ 2.26
PIF1-208ENST00000560444 PA2G4Q9UQ80 394 aaKnown RBP29.18■■■□□ 2.26
PIF1-208ENST00000560444 NUTM1Q86Y26 1132 aa29.17■■■□□ 2.26
PIF1-208ENST00000560444 AFDNP55196 1824 aaKnown RBP29.17■■■□□ 2.26
PIF1-208ENST00000560444 TTC41PQ6P2S7 1318 aa29.17■■■□□ 2.26
PIF1-208ENST00000560444 ANP32EQ9BTT0 268 aa29.16■■■□□ 2.26
PIF1-208ENST00000560444 MAP3K15Q6ZN16 1313 aa29.15■■■□□ 2.26
PIF1-208ENST00000560444 IL6STP40189 918 aaPredicted RBP29.14■■■□□ 2.26
PIF1-208ENST00000560444 SMARCC1Q92922 1105 aaPredicted RBP29.14■■■□□ 2.26
PIF1-208ENST00000560444 RFX5P48382 616 aaPredicted RBP29.13■■■□□ 2.25
PIF1-208ENST00000560444 HSP90AB3PQ58FF7 597 aa29.13■■■□□ 2.25
PIF1-208ENST00000560444 ACSBG1Q96GR2 724 aa29.13■■■□□ 2.25
PIF1-208ENST00000560444 SASH1O94885 1247 aa29.12■■■□□ 2.25
PIF1-208ENST00000560444 FOXO4P98177 505 aa29.12■■■□□ 2.25
PIF1-208ENST00000560444 TSHZ3Q63HK5 1081 aa29.12■■■□□ 2.25
PIF1-208ENST00000560444 GIGYF2Q6Y7W6 1299 aaKnown RBP29.12■■■□□ 2.25
PIF1-208ENST00000560444 PI4K2BQ8TCG2 481 aa29.12■■■□□ 2.25
PIF1-208ENST00000560444 JARID2Q92833 1246 aaPredicted RBP29.12■■■□□ 2.25
PIF1-208ENST00000560444 GPATCH3Q96I76 525 aa29.12■■■□□ 2.25
PIF1-208ENST00000560444 ZNF330Q9Y3S2 320 aaPredicted RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms