RNA–Protein interactions for RNA: ENST00000560390.1

TM2D3-211, Transcript of TM2 domain containing 3, humanhuman

Gene TM2D3, Length 3,102 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-211ENST00000560390 FLIIQ13045 1269 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 SLC27A3Q5K4L6 730 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 NBPF14Q5TI25 921 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 NBPF10Q6P3W6 841 aaKnown RBP7.11□□□□□ -1.27
TM2D3-211ENST00000560390 ILDR2Q71H61 639 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 SMIM5Q71RC9 77 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 COPS6Q7L5N1 327 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 MRPL50Q8N5N7 158 aaKnown RBP7.11□□□□□ -1.27
TM2D3-211ENST00000560390 NBPF15Q8N660 670 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 AK7Q96M32 723 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 CCDC87Q9NVE4 849 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 HYPKQ9NX55 129 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 KIF16BQ96L93 1317 aa7.11□□□□□ -1.27
TM2D3-211ENST00000560390 IPO8O15397 1037 aaKnown RBP7.1□□□□□ -1.27
TM2D3-211ENST00000560390 PHF14O94880 888 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 SLC4A10Q6U841 1118 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 FTSJ3Q8IY81 847 aaKnown RBP7.1□□□□□ -1.27
TM2D3-211ENST00000560390 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
TM2D3-211ENST00000560390 VIRMAQ69YN4 1812 aaKnown RBP7.1□□□□□ -1.27
TM2D3-211ENST00000560390 PDIA6Q15084 440 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 ZKSCAN2Q63HK3 967 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 XAGE3Q8WTP9 111 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 SIPA1L3O60292 1781 aaPredicted RBP7.1□□□□□ -1.27
TM2D3-211ENST00000560390 F6X3S4 739 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 TFCP2L1Q9NZI6 479 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 TBC1D2BQ9UPU7 963 aa7.1□□□□□ -1.27
TM2D3-211ENST00000560390 RTCBQ9Y3I0 505 aaKnown RBP7.1□□□□□ -1.27
TM2D3-211ENST00000560390 NHSQ6T4R5 1651 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 KDM3BQ7LBC6 1761 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 BTAF1O14981 1849 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 PI4KAP2A4QPH2 592 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 DDX58O95786 925 aaKnown RBP7.09□□□□□ -1.27
TM2D3-211ENST00000560390 INTS5Q6P9B9 1019 aaKnown RBP7.09□□□□□ -1.27
TM2D3-211ENST00000560390 ATF7IPQ6VMQ6 1270 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 RIC3Q7Z5B4 369 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 CCDC125Q86Z20 511 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 PI4KAP1Q8N8J0 262 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 ZBTB3Q9H5J0 574 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 PDZRN3Q9UPQ7 1066 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 TRIM27P14373 513 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 PDE3AQ14432 1141 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 TTLL7Q6ZT98 887 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 UPF1Q92900 1129 aaKnown RBP eCLIP7.09□□□□□ -1.27
TM2D3-211ENST00000560390 CAMKK2Q96RR4 588 aa7.09□□□□□ -1.27
TM2D3-211ENST00000560390 ERBB4Q15303 1308 aa7.09□□□□□ -1.28
TM2D3-211ENST00000560390 IL6STP40189 918 aaPredicted RBP7.08□□□□□ -1.28
TM2D3-211ENST00000560390 ANKRD13DQ6ZTN6 518 aa7.08□□□□□ -1.28
TM2D3-211ENST00000560390 TBC1D2Q9BYX2 928 aa7.08□□□□□ -1.28
TM2D3-211ENST00000560390 KIF6Q6ZMV9 814 aa7.08□□□□□ -1.28
TM2D3-211ENST00000560390 DZIP3Q86Y13 1208 aaKnown RBP7.08□□□□□ -1.28
TM2D3-211ENST00000560390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 ZBTB22O15209 634 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 PTPRCP08575 1304 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 SBF2Q86WG5 1849 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 DZIP1LQ8IYY4 767 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 API5Q9BZZ5 524 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 ANTXR1Q9H6X2 564 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 MAP3K2Q9Y2U5 619 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 CNTNAP4Q9C0A0 1308 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 RPS6KA4O75676 772 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 HMGB2P26583 209 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 RFC4P35249 363 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 EIF5P55010 431 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 TRAPPC3LQ5T215 181 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 RC3H1Q5TC82 1133 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 ITPRIPQ8IWB1 547 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 ZPR1O75312 459 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 CDK11BP21127 795 aaKnown RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 BRPF1P55201 1214 aaPredicted RBP7.07□□□□□ -1.28
TM2D3-211ENST00000560390 KSR2Q6VAB6 950 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 LRP10Q7Z4F1 713 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 DNAAF4Q8WXU2 420 aa7.07□□□□□ -1.28
TM2D3-211ENST00000560390 PDE4CQ08493 712 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 ZNF827Q17R98 1081 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 ARHGAP45Q92619 1136 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
TM2D3-211ENST00000560390 RRAGDQ9NQL2 400 aaPredicted RBP7.06□□□□□ -1.28
TM2D3-211ENST00000560390 PAPPAQ13219 1627 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 COL15A1P39059 1388 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 ATP5J2-PTCD1G3V325 749 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
TM2D3-211ENST00000560390 BECN1Q14457 450 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 PANK2Q9BZ23 570 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 STK32BQ9NY57 414 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 UBR2Q8IWV8 1755 aa7.06□□□□□ -1.28
TM2D3-211ENST00000560390 GPTP24298 496 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 BICDL1Q6ZP65 573 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 TMEM57Q8N5G2 664 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 PLBD2Q8NHP8 589 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 TBC1D32Q96NH3 1257 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 MYD88Q99836 296 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 SRP68Q9UHB9 627 aaKnown RBP7.05□□□□□ -1.28
TM2D3-211ENST00000560390 C5P01031 1676 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 A0A087WZG4 1122 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 FAM177BA6PVY3 158 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 SLC15A2Q16348 729 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 HLFQ16534 295 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 CWF19L2Q2TBE0 894 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms