RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
RABGGTA-215ENST00000560207 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
RABGGTA-215ENST00000560207 PARP3Q9Y6F1 533 aa15.43■□□□□ 0.06
RABGGTA-215ENST00000560207 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 TM4SF1P30408 202 aa15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 PDGFDQ9GZP0 370 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 PPP1R1BQ9UD71 204 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 ATP10DQ9P241 1426 aa15.42■□□□□ 0.06
RABGGTA-215ENST00000560207 ARFGEF2Q9Y6D5 1785 aa15.41■□□□□ 0.06
RABGGTA-215ENST00000560207 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
RABGGTA-215ENST00000560207 PTGER2P43116 358 aa15.41■□□□□ 0.06
RABGGTA-215ENST00000560207 XAGE3Q8WTP9 111 aa15.41■□□□□ 0.06
RABGGTA-215ENST00000560207 SRP68Q9UHB9 627 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-215ENST00000560207 RNF123Q5XPI4 1314 aa15.41■□□□□ 0.06
RABGGTA-215ENST00000560207 AFDNP55196 1824 aaKnown RBP15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 KIF13BQ9NQT8 1826 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 MMP10P09238 476 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 BRPF1P55201 1214 aaPredicted RBP15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 FKBP8Q14318 412 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 PARP10Q53GL7 1025 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
RABGGTA-215ENST00000560207 IBTKQ9P2D0 1353 aaPredicted RBP15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 PROSER3Q2NL68 480 aa15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 KSR2Q6VAB6 950 aa15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 RIC3Q7Z5B4 369 aa15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 PTPRCP08575 1304 aa15.39■□□□□ 0.05
RABGGTA-215ENST00000560207 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 FLIIQ13045 1269 aa15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 TRIM28Q13263 835 aaKnown RBP15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 NFIXQ14938 502 aa15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 TTLL7Q6ZT98 887 aa15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 PPP1R42Q7Z4L9 355 aa15.38■□□□□ 0.05
RABGGTA-215ENST00000560207 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
RABGGTA-215ENST00000560207 MSL1Q68DK7 614 aa15.37■□□□□ 0.05
RABGGTA-215ENST00000560207 SMIM5Q71RC9 77 aa15.37■□□□□ 0.05
RABGGTA-215ENST00000560207 ZBTB3Q9H5J0 574 aa15.37■□□□□ 0.05
RABGGTA-215ENST00000560207 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
RABGGTA-215ENST00000560207 POLRMTO00411 1230 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 IPO8O15397 1037 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 ANXA1P04083 346 aa15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 SERPINB2P05120 415 aa15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 FKBP5Q13451 457 aaPredicted RBP15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 TBC1D9BQ66K14 1250 aa15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 PHAXQ9H814 394 aaKnown RBP15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 KIF16BQ96L93 1317 aa15.36■□□□□ 0.05
RABGGTA-215ENST00000560207 NPHP1O15259 732 aa15.35■□□□□ 0.05
RABGGTA-215ENST00000560207 TGFB2P61812 414 aa15.35■□□□□ 0.05
RABGGTA-215ENST00000560207 ST5P78524 1137 aa15.35■□□□□ 0.05
RABGGTA-215ENST00000560207 ARHGAP45Q92619 1136 aa15.35■□□□□ 0.05
RABGGTA-215ENST00000560207 METTL22Q9BUU2 404 aaPredicted RBP15.35■□□□□ 0.05
RABGGTA-215ENST00000560207 SMC4Q9NTJ3 1288 aa15.35■□□□□ 0.05
RABGGTA-215ENST00000560207 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 HLFQ16534 295 aa15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 CNBD1Q8NA66 436 aa15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 CCDC191Q8NCU4 936 aa15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
RABGGTA-215ENST00000560207 PDE6BP35913 854 aa15.33■□□□□ 0.04
RABGGTA-215ENST00000560207 RARSP54136 660 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-215ENST00000560207 MRPL50Q8N5N7 158 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-215ENST00000560207 MAP3K2Q9Y2U5 619 aa15.33■□□□□ 0.04
RABGGTA-215ENST00000560207 RIC1Q4ADV7 1423 aa15.33■□□□□ 0.04
RABGGTA-215ENST00000560207 N4BP2Q86UW6 1770 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 DDR1Q08345 913 aa15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 BICDL1Q6ZP65 573 aa15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 DNAAF4Q8WXU2 420 aa15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 UTP14AQ9BVJ6 771 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 BRIP1Q9BX63 1249 aa15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 API5Q9BZZ5 524 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
RABGGTA-215ENST00000560207 NLRP10Q86W26 655 aa15.31■□□□□ 0.04
RABGGTA-215ENST00000560207 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
RABGGTA-215ENST00000560207 PXDNLA1KZ92 1463 aa15.31■□□□□ 0.04
RABGGTA-215ENST00000560207 DLEC1Q9Y238 1755 aa15.31■□□□□ 0.04
RABGGTA-215ENST00000560207 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 TCERG1O14776 1098 aaKnown RBP15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 ADCY9O60503 1353 aa15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 MS4A1P11836 297 aa15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 G2E3Q7L622 706 aa15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 CWC25Q9NXE8 425 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
RABGGTA-215ENST00000560207 MYH3P11055 1940 aa15.29■□□□□ 0.04
RABGGTA-215ENST00000560207 LAMB2P55268 1798 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms