RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 UBTFL1P0CB47 393 aaPredicted RBP6.15□□□□□ -1.43
LRRC49-221ENST00000560107 DMTNQ08495 405 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 CCDC30Q5VVM6 783 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 CWC27Q6UX04 472 aaKnown RBP6.15□□□□□ -1.43
LRRC49-221ENST00000560107 CCDC83Q8IWF9 413 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 KIAA1524Q8TCG1 905 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.15□□□□□ -1.43
LRRC49-221ENST00000560107 AOX1Q06278 1338 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 SOS1Q07889 1333 aaPredicted RBP6.15□□□□□ -1.43
LRRC49-221ENST00000560107 OVOS2A0A0J9YW53 1432 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 OVOS2Q6IE36 1432 aa6.15□□□□□ -1.43
LRRC49-221ENST00000560107 ARHGEF10O15013 1369 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 RIOK3O14730 519 aaKnown RBP6.14□□□□□ -1.43
LRRC49-221ENST00000560107 EPB41L2O43491 1005 aaKnown RBP6.14□□□□□ -1.43
LRRC49-221ENST00000560107 GJB2P29033 226 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 PPP1R42Q7Z4L9 355 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 CERS3Q8IU89 383 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 SSH3Q8TE77 659 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 CASTP20810 708 aaKnown RBP6.14□□□□□ -1.43
LRRC49-221ENST00000560107 RHPN1Q8TCX5 695 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 ZNF526Q8TF50 670 aaPredicted RBP6.14□□□□□ -1.43
LRRC49-221ENST00000560107 PRDM16Q9HAZ2 1276 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 HYPKQ9NX55 129 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 MTMR6Q9Y217 621 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 ATP6V1DQ9Y5K8 247 aa6.14□□□□□ -1.43
LRRC49-221ENST00000560107 FAM208AQ9UK61 1670 aaKnown RBP6.14□□□□□ -1.43
LRRC49-221ENST00000560107 SPDYE4A6NLX3 237 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 GRIPAP1Q4V328 841 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 UTP14CQ5TAP6 766 aaKnown RBP6.13□□□□□ -1.43
LRRC49-221ENST00000560107 PLCD3Q8N3E9 789 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 DDX54Q8TDD1 881 aaKnown RBP6.13□□□□□ -1.43
LRRC49-221ENST00000560107 PHAXQ9H814 394 aaKnown RBP6.13□□□□□ -1.43
LRRC49-221ENST00000560107 CHMP3Q9Y3E7 222 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 SPATA31D1Q6ZQQ2 1576 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 VPS37CA5D8V6 355 aaPredicted RBP6.13□□□□□ -1.43
LRRC49-221ENST00000560107 SRGAP3O43295 1099 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 RAB11FIP3O75154 756 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 MLECQ14165 292 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 ADCK5Q3MIX3 580 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 CNTROBQ8N137 903 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 PDCL2Q8N4E4 241 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 EYA1Q99502 592 aa6.13□□□□□ -1.43
LRRC49-221ENST00000560107 CEP170BQ9Y4F5 1589 aaPredicted RBP6.13□□□□□ -1.43
LRRC49-221ENST00000560107 PTGS1P23219 599 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 PTH1RQ03431 593 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 ST3GAL1Q11201 340 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 NECAB1Q8N987 351 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 JAKMIP1Q96N16 626 aaKnown RBP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 DIAPH3Q9NSV4 1193 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 PDRG1Q9NUG6 133 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 USP31Q70CQ4 1352 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 NALCNQ8IZF0 1738 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 NBPF7P0C2Y1 421 aaPredicted RBP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 CCDC192P0DO97 292 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 U2AF2P26368 475 aaKnown RBP eCLIP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 CHAF1AQ13111 956 aaPredicted RBP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 POLA2Q14181 598 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 CAMK4Q16566 473 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 PRPF40BQ6NWY9 871 aaKnown RBP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 FAM173BQ6P4H8 233 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 FERMT3Q86UX7 667 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 SIRT1Q96EB6 747 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 KIF1BPQ96EK5 621 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 FMN2Q9NZ56 1722 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 KDRP35968 1356 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 USP6P35125 1406 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 GNAT3A8MTJ3 354 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 PATL2C9JE40 543 aaKnown RBP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 TPM3P06753 285 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 LIG1P18858 919 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 AMPHP49418 695 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 FAM193AP78312 1265 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 COL9A3Q14050 684 aaPredicted RBP6.12□□□□□ -1.43
LRRC49-221ENST00000560107 ME3Q16798 604 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 TTC6Q86TZ1 520 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 LUZP1Q86V48 1076 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 IL17REQ8NFR9 667 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 ANKRD7Q92527 254 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 MRVI1Q9Y6F6 885 aa6.12□□□□□ -1.43
LRRC49-221ENST00000560107 TECPR2O15040 1411 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 PLEKHG3A1L390 1219 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 GOLGA6L6A8MZA4 724 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 LRMPQ12912 555 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 HDGFL1Q5TGJ6 251 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 VPS53Q5VIR6 699 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 CKAP2LQ8IYA6 745 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 FAM200AQ8TCP9 573 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 ZSWIM6Q9HCJ5 1215 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 NRBP1Q9UHY1 535 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 CYP46A1Q9Y6A2 500 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 N4BP2Q86UW6 1770 aaPredicted RBP6.11□□□□□ -1.43
LRRC49-221ENST00000560107 IGSF1Q8N6C5 1336 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 FLT4P35916 1363 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.11□□□□□ -1.43
LRRC49-221ENST00000560107 CTIFO43310 598 aaKnown RBP6.11□□□□□ -1.43
LRRC49-221ENST00000560107 EIF2S2P20042 333 aaKnown RBP6.11□□□□□ -1.43
LRRC49-221ENST00000560107 TYRO3Q06418 890 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 MAP3K11Q16584 847 aa6.11□□□□□ -1.43
LRRC49-221ENST00000560107 LARP1BQ659C4 914 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms