RNA–Protein interactions for RNA: ENST00000559840.1

CYCSP38-201, Transcript of cytochrome c, somatic pseudogene 38, humanhuman

BASIC

Gene CYCSP38, Length 322 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP38-201ENST00000559840 MCM10Q7L590 875 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 DZIP3Q86Y13 1208 aaKnown RBP8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 ZNF622Q969S3 477 aaKnown RBP eCLIP8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 KLRG1Q96E93 195 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 CFAP53Q96M91 514 aa8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 ZNF219Q9P2Y4 722 aaPredicted RBP8.2□□□□□ -1.1
CYCSP38-201ENST00000559840 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 PRPF40BQ6NWY9 871 aaKnown RBP8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 JMYQ8N9B5 988 aa8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 PDZRN3Q9UPQ7 1066 aa8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 USP16Q9Y5T5 823 aa8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 LAMB4A4D0S4 1761 aa8.19□□□□□ -1.1
CYCSP38-201ENST00000559840 SLX4Q8IY92 1834 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 CACNA1SQ13698 1873 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 POTECB2RU33 542 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 SRGNP10124 158 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 VEGFAP15692 232 aaPredicted RBP8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 ST5P78524 1137 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 DCTN1Q14203 1278 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 STYK1Q6J9G0 422 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 TAOK3Q9H2K8 898 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 NUDCQ9Y266 331 aa8.18□□□□□ -1.1
CYCSP38-201ENST00000559840 KDM3BQ7LBC6 1761 aa8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 DICER1Q9UPY3 1922 aaKnown RBP8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 NPHP1O15259 732 aa8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 SNRPA1P09661 255 aaKnown RBP8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 ERFEQ4G0M1 354 aa8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 RTF1Q92541 710 aaKnown RBP8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 MASTLQ96GX5 879 aa8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 CCDC88AQ3V6T2 1871 aa8.17□□□□□ -1.1
CYCSP38-201ENST00000559840 CLEC4GQ6UXB4 293 aa8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 NBPF5PQ86XG9 351 aaPredicted RBP8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 SNED1Q8TER0 1413 aa8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 C7orf43Q8WVR3 580 aa8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 CNKSR1Q969H4 720 aa8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 ABCC12Q96J65 1359 aa8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 ZNF652Q9Y2D9 606 aa8.16□□□□□ -1.1
CYCSP38-201ENST00000559840 KLRG2A4D1S0 409 aaPredicted RBP8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 RGL2O15211 777 aa8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 HTATSF1O43719 755 aaKnown RBP8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 DDNO94850 711 aaPredicted RBP8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 POTEIP0CG38 1075 aa8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 POTEJP0CG39 1038 aa8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 CCDC93Q567U6 631 aa8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 COL13A1Q5TAT6 717 aaPredicted RBP8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 SOGA3Q5TF21 947 aa8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 OLFM4Q6UX06 510 aa8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 NIP7Q9Y221 180 aaKnown RBP eCLIP8.15□□□□□ -1.1
CYCSP38-201ENST00000559840 ZNF541Q9H0D2 1346 aa8.14□□□□□ -1.11
CYCSP38-201ENST00000559840 FAM177BA6PVY3 158 aa8.14□□□□□ -1.11
CYCSP38-201ENST00000559840 NPR1P16066 1061 aa8.14□□□□□ -1.11
CYCSP38-201ENST00000559840 HLFQ16534 295 aa8.14□□□□□ -1.11
CYCSP38-201ENST00000559840 DPY19L2Q6NUT2 758 aa8.14□□□□□ -1.11
CYCSP38-201ENST00000559840 MIS18AQ9NYP9 233 aa8.14□□□□□ -1.11
CYCSP38-201ENST00000559840 DLG5Q8TDM6 1919 aa8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 RIC1Q4ADV7 1423 aa8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 FKBP4Q02790 459 aaKnown RBP eCLIP8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 CHADLQ6NUI6 762 aa8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 L3MBTL3Q96JM7 780 aaPredicted RBP8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 PLEKHF1Q96S99 279 aa8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 THUMPD2Q9BTF0 503 aaKnown RBP8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 ZNF277Q9NRM2 450 aaPredicted RBP8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 PODXL2Q9NZ53 605 aa8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 COL4A5P29400 1685 aa8.13□□□□□ -1.11
CYCSP38-201ENST00000559840 ADAMTSL1Q8N6G6 1762 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 IBTKQ9P2D0 1353 aaPredicted RBP8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 MAP3K15Q6ZN16 1313 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 UBN2Q6ZU65 1347 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 HSPA1AP0DMV8 641 aaKnown RBP8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 HSPA1BP0DMV9 641 aaKnown RBP8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 EIF4A1P60842 406 aaKnown RBP8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 NFE2L2Q16236 605 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 CRY2Q49AN0 593 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 NUTM1Q86Y26 1132 aa8.12□□□□□ -1.11
CYCSP38-201ENST00000559840 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 SCN4AP35499 1836 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 TTLL7Q6ZT98 887 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 LDHDQ86WU2 507 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 NGEFQ8N5V2 710 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 PNISRQ8TF01 805 aaKnown RBP8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 TAF1DQ9H5J8 278 aaPredicted RBP8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 CREBZFQ9NS37 354 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 FOXD4L1Q9NU39 408 aa8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 MKRN1Q9UHC7 482 aaKnown RBP8.11□□□□□ -1.11
CYCSP38-201ENST00000559840 RNF123Q5XPI4 1314 aa8.1□□□□□ -1.11
CYCSP38-201ENST00000559840 MAPK8IP3Q9UPT6 1336 aa8.1□□□□□ -1.11
CYCSP38-201ENST00000559840 ERVV-1B6SEH8 477 aa8.1□□□□□ -1.11
CYCSP38-201ENST00000559840 NEFMP07197 916 aa8.1□□□□□ -1.11
CYCSP38-201ENST00000559840 MYL6BP14649 208 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms