RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 CANXP27824 592 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 SLC39A6Q13433 755 aa12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 DEFB115Q30KQ5 88 aa12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 PAXIP1Q6ZW49 1069 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 ABT1Q9ULW3 272 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-208ENST00000559686 SCN4AP35499 1836 aa12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 SLX4Q8IY92 1834 aa12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 IQCA1LA6NCM1 817 aa12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 ITGBL1O95965 494 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 PRKAR2AP13861 404 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 ZNF330Q9Y3S2 320 aaPredicted RBP12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-208ENST00000559686 NPHP1O15259 732 aa12.34□□□□□ -0.43
SNRPA1-208ENST00000559686 TBC1D9BQ66K14 1250 aa12.34□□□□□ -0.43
SNRPA1-208ENST00000559686 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
SNRPA1-208ENST00000559686 SSUH2Q9Y2M2 353 aa12.34□□□□□ -0.43
SNRPA1-208ENST00000559686 PDE6BP35913 854 aa12.33□□□□□ -0.44
SNRPA1-208ENST00000559686 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-208ENST00000559686 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
SNRPA1-208ENST00000559686 ZNF541Q9H0D2 1346 aa12.33□□□□□ -0.44
SNRPA1-208ENST00000559686 RASSF10A6NK89 507 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 SULT6B1Q6IMI4 303 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 PRR5LQ6MZQ0 368 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 PRPF40BQ6NWY9 871 aaKnown RBP12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 LGR6Q9HBX8 967 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 HACL1Q9UJ83 578 aa12.32□□□□□ -0.44
SNRPA1-208ENST00000559686 EPHX2P34913 555 aa12.31□□□□□ -0.44
SNRPA1-208ENST00000559686 BRIP1Q9BX63 1249 aa12.31□□□□□ -0.44
SNRPA1-208ENST00000559686 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
SNRPA1-208ENST00000559686 SCN7AQ01118 1682 aa12.31□□□□□ -0.44
SNRPA1-208ENST00000559686 RNF123Q5XPI4 1314 aa12.31□□□□□ -0.44
SNRPA1-208ENST00000559686 LTBP3Q9NS15 1303 aa12.31□□□□□ -0.44
SNRPA1-208ENST00000559686 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 ARFGEF2Q9Y6D5 1785 aa12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 RGS19P49795 217 aa12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 CYP4F22Q6NT55 531 aa12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 CAPNS2Q96L46 248 aa12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 ZNF277Q9NRM2 450 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 TBC1D2BQ9UPU7 963 aa12.3□□□□□ -0.44
SNRPA1-208ENST00000559686 EVX2Q03828 476 aa12.29□□□□□ -0.44
SNRPA1-208ENST00000559686 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
SNRPA1-208ENST00000559686 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
SNRPA1-208ENST00000559686 CNBD1Q8NA66 436 aa12.28□□□□□ -0.44
SNRPA1-208ENST00000559686 GPR101Q96P66 508 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-208ENST00000559686 THSD7BQ9C0I4 1608 aa12.27□□□□□ -0.44
SNRPA1-208ENST00000559686 AOC2O75106 756 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 SRGNP10124 158 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 ST5P78524 1137 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 CCDC93Q567U6 631 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 STYK1Q6J9G0 422 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 MASTLQ96GX5 879 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 MCOLN1Q9GZU1 580 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 GJA3Q9Y6H8 435 aa12.27□□□□□ -0.45
SNRPA1-208ENST00000559686 LTBP1Q14766 1721 aa12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 UBR2Q8IWV8 1755 aa12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 A0A087WZG4 1122 aa12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 EIF5P55010 431 aaKnown RBP12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 SOGA3Q5TF21 947 aa12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 PNMA8AQ86V59 439 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNRPA1-208ENST00000559686 CASP8AP2Q9UKL3 1982 aa12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 TRAF5O00463 557 aa12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 STARD3NLO95772 234 aa12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 ECE1P42892 770 aa12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 FKBP4Q02790 459 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 DGKZQ13574 1117 aa12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 MRC1P22897 1456 aa12.25□□□□□ -0.45
SNRPA1-208ENST00000559686 FAM177BA6PVY3 158 aa12.24□□□□□ -0.45
SNRPA1-208ENST00000559686 HMOX1P09601 288 aa12.24□□□□□ -0.45
SNRPA1-208ENST00000559686 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
SNRPA1-208ENST00000559686 TRPM7Q96QT4 1865 aa12.24□□□□□ -0.45
SNRPA1-208ENST00000559686 A1BGP04217 495 aa12.23□□□□□ -0.45
SNRPA1-208ENST00000559686 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-208ENST00000559686 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
SNRPA1-208ENST00000559686 SYNE4Q8N205 404 aa12.23□□□□□ -0.45
SNRPA1-208ENST00000559686 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
SNRPA1-208ENST00000559686 LMOD1P29536 600 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-208ENST00000559686 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-208ENST00000559686 PIP4K2AP48426 406 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-208ENST00000559686 SOX10P56693 466 aa12.22□□□□□ -0.45
SNRPA1-208ENST00000559686 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
SNRPA1-208ENST00000559686 C7orf43Q8WVR3 580 aa12.22□□□□□ -0.45
SNRPA1-208ENST00000559686 CAMTA2O94983 1202 aa12.21□□□□□ -0.45
SNRPA1-208ENST00000559686 CST9Q5W186 159 aa12.21□□□□□ -0.45
SNRPA1-208ENST00000559686 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-208ENST00000559686 GPC2Q8N158 579 aa12.21□□□□□ -0.45
SNRPA1-208ENST00000559686 ZNF496Q96IT1 587 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-208ENST00000559686 FZD9O00144 591 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms