RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 MAP3K15Q6ZN16 1313 aa25.25■■□□□ 1.63
SHF-205ENST00000559566 EXOSC9Q06265 439 aaKnown RBP25.24■■□□□ 1.63
SHF-205ENST00000559566 XAGE3Q8WTP9 111 aa25.24■■□□□ 1.63
SHF-205ENST00000559566 TWISTNBQ3B726 338 aaPredicted RBP25.23■■□□□ 1.63
SHF-205ENST00000559566 COPS6Q7L5N1 327 aa25.23■■□□□ 1.63
SHF-205ENST00000559566 CDCA7LQ96GN5 454 aa25.23■■□□□ 1.63
SHF-205ENST00000559566 CD2APQ9Y5K6 639 aa25.23■■□□□ 1.63
SHF-205ENST00000559566 TCERG1O14776 1098 aaKnown RBP25.22■■□□□ 1.63
SHF-205ENST00000559566 SERPINB2P05120 415 aa25.22■■□□□ 1.63
SHF-205ENST00000559566 AIMP1Q12904 312 aaKnown RBP25.22■■□□□ 1.63
SHF-205ENST00000559566 CARMIL3Q8ND23 1372 aa25.21■■□□□ 1.63
SHF-205ENST00000559566 ERVV-1B6SEH8 477 aa25.21■■□□□ 1.63
SHF-205ENST00000559566 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
SHF-205ENST00000559566 CLEC4GQ6UXB4 293 aa25.21■■□□□ 1.63
SHF-205ENST00000559566 KIF6Q6ZMV9 814 aa25.21■■□□□ 1.63
SHF-205ENST00000559566 DBF4Q9UBU7 674 aaPredicted RBP25.21■■□□□ 1.63
SHF-205ENST00000559566 MYH16Q9H6N6 1097 aa25.2■■□□□ 1.62
SHF-205ENST00000559566 NRXN2Q9P2S2 1712 aa25.2■■□□□ 1.62
SHF-205ENST00000559566 VAMP4O75379 141 aa25.19■■□□□ 1.62
SHF-205ENST00000559566 SLFN5Q08AF3 891 aa25.19■■□□□ 1.62
SHF-205ENST00000559566 CCDC24Q8N4L8 307 aa25.19■■□□□ 1.62
SHF-205ENST00000559566 PHAXQ9H814 394 aaKnown RBP25.19■■□□□ 1.62
SHF-205ENST00000559566 KIAA1551Q9HCM1 1747 aa25.18■■□□□ 1.62
SHF-205ENST00000559566 PXDNLA1KZ92 1463 aa25.18■■□□□ 1.62
SHF-205ENST00000559566 RGL2O15211 777 aa25.18■■□□□ 1.62
SHF-205ENST00000559566 SETDB2Q96T68 719 aa25.18■■□□□ 1.62
SHF-205ENST00000559566 ZNF652Q9Y2D9 606 aa25.18■■□□□ 1.62
SHF-205ENST00000559566 AFDNP55196 1824 aaKnown RBP25.17■■□□□ 1.62
SHF-205ENST00000559566 CCDC30Q5VVM6 783 aa25.17■■□□□ 1.62
SHF-205ENST00000559566 NIP7Q9Y221 180 aaKnown RBP eCLIP25.17■■□□□ 1.62
SHF-205ENST00000559566 KIF13BQ9NQT8 1826 aa25.16■■□□□ 1.62
SHF-205ENST00000559566 UBN2Q6ZU65 1347 aa25.16■■□□□ 1.62
SHF-205ENST00000559566 PRR5LQ6MZQ0 368 aa25.16■■□□□ 1.62
SHF-205ENST00000559566 GIGYF2Q6Y7W6 1299 aaKnown RBP25.16■■□□□ 1.62
SHF-205ENST00000559566 HYPKQ9NX55 129 aa25.16■■□□□ 1.62
SHF-205ENST00000559566 ATP10DQ9P241 1426 aa25.16■■□□□ 1.62
SHF-205ENST00000559566 E9PSI1 815 aa25.15■■□□□ 1.62
SHF-205ENST00000559566 GPTP24298 496 aa25.15■■□□□ 1.62
SHF-205ENST00000559566 WWC3Q9ULE0 1092 aa25.15■■□□□ 1.62
SHF-205ENST00000559566 G2E3Q7L622 706 aa25.14■■□□□ 1.62
SHF-205ENST00000559566 ZNF34Q8IZ26 560 aa25.14■■□□□ 1.62
SHF-205ENST00000559566 A0A0G2JLW4 131 aa25.13■■□□□ 1.61
SHF-205ENST00000559566 FAM177BA6PVY3 158 aa25.13■■□□□ 1.61
SHF-205ENST00000559566 DPEP1P16444 411 aa25.13■■□□□ 1.61
SHF-205ENST00000559566 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
SHF-205ENST00000559566 TRMT2AQ8IZ69 625 aaKnown RBP25.13■■□□□ 1.61
SHF-205ENST00000559566 NUP98P52948 1817 aa25.12■■□□□ 1.61
SHF-205ENST00000559566 KCNA3P22001 575 aa25.11■■□□□ 1.61
SHF-205ENST00000559566 CHRNA5P30532 468 aa25.11■■□□□ 1.61
SHF-205ENST00000559566 SUSD4Q5VX71 490 aa25.11■■□□□ 1.61
SHF-205ENST00000559566 PLBD2Q8NHP8 589 aa25.11■■□□□ 1.61
SHF-205ENST00000559566 YBX3P16989 372 aaKnown RBP eCLIP25.1■■□□□ 1.61
SHF-205ENST00000559566 TGFB2P61812 414 aa25.1■■□□□ 1.61
SHF-205ENST00000559566 ANKRD13DQ6ZTN6 518 aa25.1■■□□□ 1.61
SHF-205ENST00000559566 NBPF5PQ86XG9 351 aaPredicted RBP25.1■■□□□ 1.61
SHF-205ENST00000559566 CNBD1Q8NA66 436 aa25.1■■□□□ 1.61
SHF-205ENST00000559566 N4BP2Q86UW6 1770 aaPredicted RBP25.09■■□□□ 1.61
SHF-205ENST00000559566 SLC4A2P04920 1241 aa25.09■■□□□ 1.61
SHF-205ENST00000559566 ZNF428Q96B54 188 aa25.09■■□□□ 1.61
SHF-205ENST00000559566 TCIRG1Q13488 830 aa25.08■■□□□ 1.61
SHF-205ENST00000559566 STK31Q9BXU1 1019 aa25.08■■□□□ 1.61
SHF-205ENST00000559566 ANKRD31Q8N7Z5 1873 aa25.08■■□□□ 1.61
SHF-205ENST00000559566 ABCC12Q96J65 1359 aa25.07■■□□□ 1.6
SHF-205ENST00000559566 NTSR2O95665 410 aa25.07■■□□□ 1.6
SHF-205ENST00000559566 NUTM1Q86Y26 1132 aa25.07■■□□□ 1.6
SHF-205ENST00000559566 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
SHF-205ENST00000559566 ADCY9O60503 1353 aa25.05■■□□□ 1.6
SHF-205ENST00000559566 ATP5J2-PTCD1G3V325 749 aa25.05■■□□□ 1.6
SHF-205ENST00000559566 NLRP10Q86W26 655 aa25.05■■□□□ 1.6
SHF-205ENST00000559566 ISCA1Q9BUE6 129 aa25.05■■□□□ 1.6
SHF-205ENST00000559566 BRIP1Q9BX63 1249 aa25.05■■□□□ 1.6
SHF-205ENST00000559566 CHMP4AQ9BY43 222 aa25.05■■□□□ 1.6
SHF-205ENST00000559566 ARFGEF2Q9Y6D5 1785 aa25.04■■□□□ 1.6
SHF-205ENST00000559566 GPR162Q16538 588 aa25.04■■□□□ 1.6
SHF-205ENST00000559566 ERFEQ4G0M1 354 aa25.04■■□□□ 1.6
SHF-205ENST00000559566 HSP90AB3PQ58FF7 597 aa25.04■■□□□ 1.6
SHF-205ENST00000559566 TPTE2Q6XPS3 522 aa25.04■■□□□ 1.6
SHF-205ENST00000559566 RIC3Q7Z5B4 369 aa25.04■■□□□ 1.6
SHF-205ENST00000559566 IBTKQ9P2D0 1353 aaPredicted RBP25.04■■□□□ 1.6
SHF-205ENST00000559566 NPHP1O15259 732 aa25.03■■□□□ 1.6
SHF-205ENST00000559566 ST5P78524 1137 aa25.03■■□□□ 1.6
SHF-205ENST00000559566 FLIIQ13045 1269 aa25.03■■□□□ 1.6
SHF-205ENST00000559566 PARP10Q53GL7 1025 aa25.03■■□□□ 1.6
SHF-205ENST00000559566 C2CD5Q86YS7 1000 aa25.03■■□□□ 1.6
SHF-205ENST00000559566 ANKRD36CQ5JPF3 1778 aa25.03■■□□□ 1.6
SHF-205ENST00000559566 TNRC6CQ9HCJ0 1690 aaKnown RBP25.02■■□□□ 1.6
SHF-205ENST00000559566 SYNE4Q8N205 404 aa25.02■■□□□ 1.6
SHF-205ENST00000559566 COL11A2P13942 1736 aaPredicted RBP25.02■■□□□ 1.6
SHF-205ENST00000559566 PI4KAP2A4QPH2 592 aa25.01■■□□□ 1.59
SHF-205ENST00000559566 PI4KAP1Q8N8J0 262 aa25.01■■□□□ 1.59
SHF-205ENST00000559566 MYD88Q99836 296 aa25.01■■□□□ 1.59
SHF-205ENST00000559566 MAP3K2Q9Y2U5 619 aa25.01■■□□□ 1.59
SHF-205ENST00000559566 GOLGB1Q14789 3259 aaKnown RBP25.01■■□□□ 1.59
SHF-205ENST00000559566 KSR2Q6VAB6 950 aa25■■□□□ 1.59
SHF-205ENST00000559566 C3orf67Q6ZVT6 689 aa25■■□□□ 1.59
SHF-205ENST00000559566 UTP14AQ9BVJ6 771 aaKnown RBP25■■□□□ 1.59
SHF-205ENST00000559566 NYXQ9GZU5 481 aa25■■□□□ 1.59
SHF-205ENST00000559566 PDE6BP35913 854 aa24.99■■□□□ 1.59
SHF-205ENST00000559566 BRCA1P38398 1863 aaKnown RBP24.99■■□□□ 1.59
SHF-205ENST00000559566 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms