RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 MASTLQ96GX5 879 aa13.38□□□□□ -0.27
SMAD3-211ENST00000559460 ZBTB1Q9Y2K1 713 aa13.38□□□□□ -0.27
SMAD3-211ENST00000559460 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 LTBP1Q14766 1721 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 CANXP27824 592 aaKnown RBP13.37□□□□□ -0.27
SMAD3-211ENST00000559460 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-211ENST00000559460 CDCA8Q53HL2 280 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 GPC2Q8N158 579 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 CCDC24Q8N4L8 307 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
SMAD3-211ENST00000559460 TBC1D9BQ66K14 1250 aa13.36□□□□□ -0.27
SMAD3-211ENST00000559460 JDP2Q8WYK2 163 aa13.36□□□□□ -0.27
SMAD3-211ENST00000559460 ZNF277Q9NRM2 450 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-211ENST00000559460 ZNF330Q9Y3S2 320 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-211ENST00000559460 EIF6P56537 245 aaKnown RBP13.35□□□□□ -0.27
SMAD3-211ENST00000559460 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
SMAD3-211ENST00000559460 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
SMAD3-211ENST00000559460 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-211ENST00000559460 PDE4DIPQ5VU43 2346 aa13.35□□□□□ -0.27
SMAD3-211ENST00000559460 SRGNP10124 158 aa13.34□□□□□ -0.27
SMAD3-211ENST00000559460 RTKN2Q8IZC4 609 aa13.34□□□□□ -0.27
SMAD3-211ENST00000559460 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
SMAD3-211ENST00000559460 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
SMAD3-211ENST00000559460 CACNA1SQ13698 1873 aa13.33□□□□□ -0.27
SMAD3-211ENST00000559460 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.27
SMAD3-211ENST00000559460 STARD3NLO95772 234 aa13.33□□□□□ -0.28
SMAD3-211ENST00000559460 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
SMAD3-211ENST00000559460 FZD9O00144 591 aa13.32□□□□□ -0.28
SMAD3-211ENST00000559460 CELF2O95319 508 aaKnown RBP13.32□□□□□ -0.28
SMAD3-211ENST00000559460 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-211ENST00000559460 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMAD3-211ENST00000559460 CIAPIN1Q6FI81 312 aa13.32□□□□□ -0.28
SMAD3-211ENST00000559460 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
SMAD3-211ENST00000559460 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
SMAD3-211ENST00000559460 TRAF5O00463 557 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 NPR1P16066 1061 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 CST9Q5W186 159 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 USP50Q70EL3 339 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-211ENST00000559460 SAPCD2Q86UD0 394 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 VSIG10Q8N0Z9 540 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 HHIPL1Q96JK4 782 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
SMAD3-211ENST00000559460 ARFGEF2Q9Y6D5 1785 aa13.3□□□□□ -0.28
SMAD3-211ENST00000559460 NOGQ13253 232 aa13.3□□□□□ -0.28
SMAD3-211ENST00000559460 ZNF408Q9H9D4 720 aa13.3□□□□□ -0.28
SMAD3-211ENST00000559460 AKAP4Q5JQC9 854 aa13.29□□□□□ -0.28
SMAD3-211ENST00000559460 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
SMAD3-211ENST00000559460 CARD14Q9BXL6 1004 aa13.29□□□□□ -0.28
SMAD3-211ENST00000559460 TBC1D2BQ9UPU7 963 aa13.29□□□□□ -0.28
SMAD3-211ENST00000559460 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
SMAD3-211ENST00000559460 TNRC18O15417 2968 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-211ENST00000559460 TRPM7Q96QT4 1865 aa13.28□□□□□ -0.28
SMAD3-211ENST00000559460 EIF5P55010 431 aaKnown RBP13.28□□□□□ -0.28
SMAD3-211ENST00000559460 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
SMAD3-211ENST00000559460 EPS15P42566 896 aa13.27□□□□□ -0.29
SMAD3-211ENST00000559460 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
SMAD3-211ENST00000559460 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
SMAD3-211ENST00000559460 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
SMAD3-211ENST00000559460 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-211ENST00000559460 SAGE1Q9NXZ1 904 aa13.26□□□□□ -0.29
SMAD3-211ENST00000559460 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
SMAD3-211ENST00000559460 SCNN1DP51172 638 aa13.25□□□□□ -0.29
SMAD3-211ENST00000559460 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
SMAD3-211ENST00000559460 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
SMAD3-211ENST00000559460 LARGE2Q8N3Y3 721 aa13.25□□□□□ -0.29
SMAD3-211ENST00000559460 PSMD1Q99460 953 aa13.25□□□□□ -0.29
SMAD3-211ENST00000559460 ADARB2Q9NS39 739 aaKnown RBP13.25□□□□□ -0.29
SMAD3-211ENST00000559460 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
SMAD3-211ENST00000559460 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
SMAD3-211ENST00000559460 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-211ENST00000559460 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
SMAD3-211ENST00000559460 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
SMAD3-211ENST00000559460 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
SMAD3-211ENST00000559460 MRC1P22897 1456 aa13.23□□□□□ -0.29
SMAD3-211ENST00000559460 GTF2E1P29083 439 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-211ENST00000559460 HUNKP57058 714 aa13.23□□□□□ -0.29
SMAD3-211ENST00000559460 DZIP3Q86Y13 1208 aaKnown RBP13.23□□□□□ -0.29
SMAD3-211ENST00000559460 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
SMAD3-211ENST00000559460 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
SMAD3-211ENST00000559460 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
SMAD3-211ENST00000559460 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
SMAD3-211ENST00000559460 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-211ENST00000559460 TRPA1O75762 1119 aa13.21□□□□□ -0.29
SMAD3-211ENST00000559460 CAMTA2O94983 1202 aa13.21□□□□□ -0.29
SMAD3-211ENST00000559460 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.29
SMAD3-211ENST00000559460 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
SMAD3-211ENST00000559460 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
SMAD3-211ENST00000559460 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
SMAD3-211ENST00000559460 PKN2Q16513 984 aaKnown RBP13.2□□□□□ -0.3
SMAD3-211ENST00000559460 GRIPAP1Q4V328 841 aa13.2□□□□□ -0.3
SMAD3-211ENST00000559460 CCDC102AQ96A19 550 aa13.2□□□□□ -0.3
SMAD3-211ENST00000559460 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
SMAD3-211ENST00000559460 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
SMAD3-211ENST00000559460 RGMBQ6NW40 437 aa13.19□□□□□ -0.3
SMAD3-211ENST00000559460 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
SMAD3-211ENST00000559460 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms