RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 SRGNP10124 158 aa19.74■□□□□ 0.75
LRRC28-213ENST00000559399 RALBP1Q15311 655 aa19.74■□□□□ 0.75
LRRC28-213ENST00000559399 STYK1Q6J9G0 422 aa19.74■□□□□ 0.75
LRRC28-213ENST00000559399 CNKSR1Q969H4 720 aa19.74■□□□□ 0.75
LRRC28-213ENST00000559399 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
LRRC28-213ENST00000559399 RRAGCQ9HB90 399 aa19.74■□□□□ 0.75
LRRC28-213ENST00000559399 MASTLQ96GX5 879 aa19.73■□□□□ 0.75
LRRC28-213ENST00000559399 ZNF219Q9P2Y4 722 aaPredicted RBP19.73■□□□□ 0.75
LRRC28-213ENST00000559399 NIP7Q9Y221 180 aaKnown RBP eCLIP19.73■□□□□ 0.75
LRRC28-213ENST00000559399 EIF4A1P60842 406 aaKnown RBP19.72■□□□□ 0.75
LRRC28-213ENST00000559399 FSTL1Q12841 308 aa19.72■□□□□ 0.75
LRRC28-213ENST00000559399 PRPF40BQ6NWY9 871 aaKnown RBP19.72■□□□□ 0.75
LRRC28-213ENST00000559399 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
LRRC28-213ENST00000559399 GLTPD2A6NH11 291 aa19.71■□□□□ 0.75
LRRC28-213ENST00000559399 TPTE2Q6XPS3 522 aa19.71■□□□□ 0.75
LRRC28-213ENST00000559399 TAOK3Q9H2K8 898 aa19.71■□□□□ 0.75
LRRC28-213ENST00000559399 SOGA3Q5TF21 947 aa19.7■□□□□ 0.74
LRRC28-213ENST00000559399 LTBP3Q9NS15 1303 aa19.7■□□□□ 0.74
LRRC28-213ENST00000559399 COL11A2P13942 1736 aaPredicted RBP19.69■□□□□ 0.74
LRRC28-213ENST00000559399 HLFQ16534 295 aa19.69■□□□□ 0.74
LRRC28-213ENST00000559399 ANKRD31Q8N7Z5 1873 aa19.69■□□□□ 0.74
LRRC28-213ENST00000559399 NPR1P16066 1061 aa19.68■□□□□ 0.74
LRRC28-213ENST00000559399 ERFEQ4G0M1 354 aa19.68■□□□□ 0.74
LRRC28-213ENST00000559399 KIF6Q6ZMV9 814 aa19.68■□□□□ 0.74
LRRC28-213ENST00000559399 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
LRRC28-213ENST00000559399 KLRG2A4D1S0 409 aaPredicted RBP19.67■□□□□ 0.74
LRRC28-213ENST00000559399 FAM177BA6PVY3 158 aa19.67■□□□□ 0.74
LRRC28-213ENST00000559399 ERVV-1B6SEH8 477 aa19.67■□□□□ 0.74
LRRC28-213ENST00000559399 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
LRRC28-213ENST00000559399 SMC1BQ8NDV3 1235 aa19.67■□□□□ 0.74
LRRC28-213ENST00000559399 TSPYL4Q9UJ04 414 aa19.67■□□□□ 0.74
LRRC28-213ENST00000559399 TNRC6CQ9HCJ0 1690 aaKnown RBP19.66■□□□□ 0.74
LRRC28-213ENST00000559399 GTF2E1P29083 439 aaPredicted RBP19.66■□□□□ 0.74
LRRC28-213ENST00000559399 RIPK4P57078 832 aa19.66■□□□□ 0.74
LRRC28-213ENST00000559399 DDX10Q13206 875 aaKnown RBP19.66■□□□□ 0.74
LRRC28-213ENST00000559399 DPY19L2Q6NUT2 758 aa19.66■□□□□ 0.74
LRRC28-213ENST00000559399 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
LRRC28-213ENST00000559399 MAP3K15Q6ZN16 1313 aa19.66■□□□□ 0.74
LRRC28-213ENST00000559399 MYL6BP14649 208 aa19.65■□□□□ 0.74
LRRC28-213ENST00000559399 LMOD3Q0VAK6 560 aa19.65■□□□□ 0.74
LRRC28-213ENST00000559399 CCDC93Q567U6 631 aa19.65■□□□□ 0.74
LRRC28-213ENST00000559399 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
LRRC28-213ENST00000559399 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
LRRC28-213ENST00000559399 LAMB4A4D0S4 1761 aa19.65■□□□□ 0.74
LRRC28-213ENST00000559399 TTLL7Q6ZT98 887 aa19.64■□□□□ 0.73
LRRC28-213ENST00000559399 DNAJC5GQ8N7S2 189 aa19.64■□□□□ 0.73
LRRC28-213ENST00000559399 NYXQ9GZU5 481 aa19.64■□□□□ 0.73
LRRC28-213ENST00000559399 KDM3BQ7LBC6 1761 aa19.64■□□□□ 0.73
LRRC28-213ENST00000559399 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
LRRC28-213ENST00000559399 C7orf43Q8WVR3 580 aa19.63■□□□□ 0.73
LRRC28-213ENST00000559399 BABAM1Q9NWV8 329 aa19.63■□□□□ 0.73
LRRC28-213ENST00000559399 ABCC12Q96J65 1359 aa19.62■□□□□ 0.73
LRRC28-213ENST00000559399 ZBTB3Q9H5J0 574 aa19.62■□□□□ 0.73
LRRC28-213ENST00000559399 SBF1O95248 1867 aa19.62■□□□□ 0.73
LRRC28-213ENST00000559399 TIAM2Q8IVF5 1701 aa19.62■□□□□ 0.73
LRRC28-213ENST00000559399 IBTKQ9P2D0 1353 aaPredicted RBP19.61■□□□□ 0.73
LRRC28-213ENST00000559399 ALDH1B1P30837 517 aa19.61■□□□□ 0.73
LRRC28-213ENST00000559399 NUTM1Q86Y26 1132 aa19.61■□□□□ 0.73
LRRC28-213ENST00000559399 UBN2Q6ZU65 1347 aa19.6■□□□□ 0.73
LRRC28-213ENST00000559399 GPTP24298 496 aa19.6■□□□□ 0.73
LRRC28-213ENST00000559399 HTRA3P83110 453 aa19.6■□□□□ 0.73
LRRC28-213ENST00000559399 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
LRRC28-213ENST00000559399 CRY2Q49AN0 593 aa19.6■□□□□ 0.73
LRRC28-213ENST00000559399 POTECB2RU33 542 aa19.59■□□□□ 0.73
LRRC28-213ENST00000559399 WDR43Q15061 677 aaKnown RBP eCLIP19.59■□□□□ 0.73
LRRC28-213ENST00000559399 CCDC146Q8IYE0 955 aa19.59■□□□□ 0.73
LRRC28-213ENST00000559399 RTKN2Q8IZC4 609 aa19.59■□□□□ 0.73
LRRC28-213ENST00000559399 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.72
LRRC28-213ENST00000559399 KLRG1Q96E93 195 aa19.58■□□□□ 0.72
LRRC28-213ENST00000559399 RIC1Q4ADV7 1423 aa19.58■□□□□ 0.72
LRRC28-213ENST00000559399 DDNO94850 711 aaPredicted RBP19.57■□□□□ 0.72
LRRC28-213ENST00000559399 PDIA6Q15084 440 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 NEUROD2Q15784 382 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 SUSD4Q5VX71 490 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 OLFM4Q6UX06 510 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 GIGYF2Q6Y7W6 1299 aaKnown RBP19.57■□□□□ 0.72
LRRC28-213ENST00000559399 LRP10Q7Z4F1 713 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 ZNF34Q8IZ26 560 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 RPGRQ92834 1020 aaKnown RBP19.57■□□□□ 0.72
LRRC28-213ENST00000559399 ZNF277Q9NRM2 450 aaPredicted RBP19.57■□□□□ 0.72
LRRC28-213ENST00000559399 SLX4Q8IY92 1834 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
LRRC28-213ENST00000559399 PARP10Q53GL7 1025 aa19.56■□□□□ 0.72
LRRC28-213ENST00000559399 RUNDC1Q96C34 613 aa19.56■□□□□ 0.72
LRRC28-213ENST00000559399 WDR90Q96KV7 1748 aa19.56■□□□□ 0.72
LRRC28-213ENST00000559399 FER1L6Q2WGJ9 1857 aa19.56■□□□□ 0.72
LRRC28-213ENST00000559399 NTSR2O95665 410 aa19.55■□□□□ 0.72
LRRC28-213ENST00000559399 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
LRRC28-213ENST00000559399 ARFGEF2Q9Y6D5 1785 aa19.55■□□□□ 0.72
LRRC28-213ENST00000559399 IQCA1LA6NCM1 817 aa19.54■□□□□ 0.72
LRRC28-213ENST00000559399 HOXA10P31260 410 aaPredicted RBP19.54■□□□□ 0.72
LRRC28-213ENST00000559399 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
LRRC28-213ENST00000559399 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
LRRC28-213ENST00000559399 CHL1O00533 1208 aa19.53■□□□□ 0.72
LRRC28-213ENST00000559399 ANXA1P04083 346 aa19.53■□□□□ 0.72
LRRC28-213ENST00000559399 IARSP41252 1262 aaKnown RBP19.53■□□□□ 0.72
LRRC28-213ENST00000559399 CC2D2BQ6DHV5 1058 aa19.53■□□□□ 0.72
LRRC28-213ENST00000559399 L3MBTL3Q96JM7 780 aaPredicted RBP19.53■□□□□ 0.72
LRRC28-213ENST00000559399 ADAMTS8Q9UP79 889 aa19.53■□□□□ 0.72
LRRC28-213ENST00000559399 TRIM35Q9UPQ4 493 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms