RNA–Protein interactions for RNA: ENST00000559338.1

MEIS3-205, Transcript of Meis homeobox 3, humanhuman

TSL 5

Gene MEIS3, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-205ENST00000559338 TBC1D9BQ66K14 1250 aa16.76■□□□□ 0.27
MEIS3-205ENST00000559338 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
MEIS3-205ENST00000559338 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
MEIS3-205ENST00000559338 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
MEIS3-205ENST00000559338 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
MEIS3-205ENST00000559338 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
MEIS3-205ENST00000559338 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
MEIS3-205ENST00000559338 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
MEIS3-205ENST00000559338 SRGNP10124 158 aa16.72■□□□□ 0.27
MEIS3-205ENST00000559338 MAP2K1Q02750 393 aaPredicted RBP16.72■□□□□ 0.27
MEIS3-205ENST00000559338 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
MEIS3-205ENST00000559338 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
MEIS3-205ENST00000559338 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
MEIS3-205ENST00000559338 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
MEIS3-205ENST00000559338 MLLT1Q03111 559 aaPredicted RBP16.71■□□□□ 0.27
MEIS3-205ENST00000559338 STYK1Q6J9G0 422 aa16.71■□□□□ 0.27
MEIS3-205ENST00000559338 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
MEIS3-205ENST00000559338 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
MEIS3-205ENST00000559338 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
MEIS3-205ENST00000559338 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
MEIS3-205ENST00000559338 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
MEIS3-205ENST00000559338 SCN11AQ9UI33 1791 aa16.7■□□□□ 0.26
MEIS3-205ENST00000559338 A0A087WZG4 1122 aa16.7■□□□□ 0.26
MEIS3-205ENST00000559338 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
MEIS3-205ENST00000559338 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
MEIS3-205ENST00000559338 STARD3NLO95772 234 aa16.69■□□□□ 0.26
MEIS3-205ENST00000559338 IL17REQ8NFR9 667 aa16.69■□□□□ 0.26
MEIS3-205ENST00000559338 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
MEIS3-205ENST00000559338 PRKAR2BP31323 418 aa16.68■□□□□ 0.26
MEIS3-205ENST00000559338 EAPPQ56P03 285 aaPredicted RBP16.68■□□□□ 0.26
MEIS3-205ENST00000559338 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
MEIS3-205ENST00000559338 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
MEIS3-205ENST00000559338 CCDC85CA6NKD9 419 aa16.67■□□□□ 0.26
MEIS3-205ENST00000559338 KCNQ3O43525 872 aa16.67■□□□□ 0.26
MEIS3-205ENST00000559338 A1BGP04217 495 aa16.67■□□□□ 0.26
MEIS3-205ENST00000559338 EPHX2P34913 555 aa16.67■□□□□ 0.26
MEIS3-205ENST00000559338 MAP1SQ66K74 1059 aaPredicted RBP16.67■□□□□ 0.26
MEIS3-205ENST00000559338 TIAM2Q8IVF5 1701 aa16.67■□□□□ 0.26
MEIS3-205ENST00000559338 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
MEIS3-205ENST00000559338 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
MEIS3-205ENST00000559338 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
MEIS3-205ENST00000559338 OLFM4Q6UX06 510 aa16.66■□□□□ 0.26
MEIS3-205ENST00000559338 PNMA8AQ86V59 439 aaPredicted RBP16.66■□□□□ 0.26
MEIS3-205ENST00000559338 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
MEIS3-205ENST00000559338 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
MEIS3-205ENST00000559338 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
MEIS3-205ENST00000559338 FZD9O00144 591 aa16.65■□□□□ 0.26
MEIS3-205ENST00000559338 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
MEIS3-205ENST00000559338 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
MEIS3-205ENST00000559338 PNISRQ8TF01 805 aaKnown RBP16.65■□□□□ 0.26
MEIS3-205ENST00000559338 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
MEIS3-205ENST00000559338 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
MEIS3-205ENST00000559338 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
MEIS3-205ENST00000559338 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
MEIS3-205ENST00000559338 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.26
MEIS3-205ENST00000559338 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
MEIS3-205ENST00000559338 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
MEIS3-205ENST00000559338 ZNF790Q6PG37 636 aa16.64■□□□□ 0.25
MEIS3-205ENST00000559338 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
MEIS3-205ENST00000559338 ZNF277Q9NRM2 450 aaPredicted RBP16.64■□□□□ 0.25
MEIS3-205ENST00000559338 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
MEIS3-205ENST00000559338 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
MEIS3-205ENST00000559338 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
MEIS3-205ENST00000559338 LMOD3Q0VAK6 560 aa16.63■□□□□ 0.25
MEIS3-205ENST00000559338 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
MEIS3-205ENST00000559338 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
MEIS3-205ENST00000559338 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
MEIS3-205ENST00000559338 TTC5Q8N0Z6 440 aa16.62■□□□□ 0.25
MEIS3-205ENST00000559338 GPR101Q96P66 508 aaPredicted RBP16.62■□□□□ 0.25
MEIS3-205ENST00000559338 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
MEIS3-205ENST00000559338 TEX13AQ9BXU3 409 aaPredicted RBP16.62■□□□□ 0.25
MEIS3-205ENST00000559338 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
MEIS3-205ENST00000559338 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
MEIS3-205ENST00000559338 ST5P78524 1137 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 CST9Q5W186 159 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 MIER1Q8N108 512 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 GPC2Q8N158 579 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 CAPNS2Q96L46 248 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 UBR2Q8IWV8 1755 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
MEIS3-205ENST00000559338 NPR1P16066 1061 aa16.6■□□□□ 0.25
MEIS3-205ENST00000559338 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
MEIS3-205ENST00000559338 RTKN2Q8IZC4 609 aa16.6■□□□□ 0.25
MEIS3-205ENST00000559338 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
MEIS3-205ENST00000559338 PHACTR3Q96KR7 559 aa16.6■□□□□ 0.25
MEIS3-205ENST00000559338 USP16Q9Y5T5 823 aa16.6■□□□□ 0.25
MEIS3-205ENST00000559338 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
MEIS3-205ENST00000559338 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
MEIS3-205ENST00000559338 SLC51AQ86UW1 340 aa16.59■□□□□ 0.25
MEIS3-205ENST00000559338 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
MEIS3-205ENST00000559338 MAP2K2P36507 400 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 IARSP41252 1262 aaKnown RBP16.58■□□□□ 0.24
MEIS3-205ENST00000559338 ECE1P42892 770 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 TEFQ10587 303 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
MEIS3-205ENST00000559338 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
MEIS3-205ENST00000559338 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
MEIS3-205ENST00000559338 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms