RNA–Protein interactions for RNA: ENST00000559169.1

LINS1-203, Transcript of lines homolog 1, humanhuman

TSL 2

Gene LINS1, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-203ENST00000559169 CD46P15529 392 aa8.35□□□□□ -1.07
LINS1-203ENST00000559169 NPM2Q86SE8 214 aaKnown RBP8.35□□□□□ -1.07
LINS1-203ENST00000559169 TMEM57Q8N5G2 664 aa8.35□□□□□ -1.07
LINS1-203ENST00000559169 CERKQ8TCT0 537 aa8.35□□□□□ -1.07
LINS1-203ENST00000559169 ITPRIPQ8IWB1 547 aa8.35□□□□□ -1.07
LINS1-203ENST00000559169 RBM46Q8TBY0 533 aaKnown RBP8.35□□□□□ -1.07
LINS1-203ENST00000559169 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
LINS1-203ENST00000559169 RBM27Q9P2N5 1060 aaKnown RBP8.35□□□□□ -1.07
LINS1-203ENST00000559169 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
LINS1-203ENST00000559169 MED1Q15648 1581 aaPredicted RBP8.35□□□□□ -1.07
LINS1-203ENST00000559169 VAMP4O75379 141 aa8.34□□□□□ -1.07
LINS1-203ENST00000559169 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
LINS1-203ENST00000559169 IGSF1Q8N6C5 1336 aa8.34□□□□□ -1.07
LINS1-203ENST00000559169 TWISTNBQ3B726 338 aaPredicted RBP8.34□□□□□ -1.07
LINS1-203ENST00000559169 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
LINS1-203ENST00000559169 IL17REQ8NFR9 667 aa8.34□□□□□ -1.07
LINS1-203ENST00000559169 TATDN2Q93075 761 aa8.34□□□□□ -1.07
LINS1-203ENST00000559169 PXDNQ92626 1479 aa8.34□□□□□ -1.07
LINS1-203ENST00000559169 PRAMEF22A3QJZ6 481 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 ANXA1P04083 346 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 ERICH6BQ5W0A0 696 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 BRINP3Q76B58 766 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 G2E3Q7L622 706 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
LINS1-203ENST00000559169 KDM2BQ8NHM5 1336 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 TMEM134Q9H6X4 195 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
LINS1-203ENST00000559169 MSH6P52701 1360 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 SLC10A3P09131 477 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 F6X3S4 739 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 PTPREP23469 700 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 ARHGEF25Q86VW2 580 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.32□□□□□ -1.08
LINS1-203ENST00000559169 IP6K1Q92551 441 aa8.32□□□□□ -1.08
LINS1-203ENST00000559169 ZKSCAN2Q63HK3 967 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 RSBN1LQ6PCB5 846 aaPredicted RBP8.31□□□□□ -1.08
LINS1-203ENST00000559169 DZIP1LQ8IYY4 767 aaKnown RBP8.31□□□□□ -1.08
LINS1-203ENST00000559169 OTUD5Q96G74 571 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 TSPYL4Q9UJ04 414 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 PCDHGC3Q9UN70 934 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 KAT6BQ8WYB5 2073 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 CRB1P82279 1406 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 ARHGEF10O15013 1369 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 PIP4K2AP48426 406 aaPredicted RBP8.31□□□□□ -1.08
LINS1-203ENST00000559169 MRPL50Q8N5N7 158 aaKnown RBP8.31□□□□□ -1.08
LINS1-203ENST00000559169 HMX1Q9NP08 348 aaPredicted RBP8.31□□□□□ -1.08
LINS1-203ENST00000559169 IFT57Q9NWB7 429 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
LINS1-203ENST00000559169 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
LINS1-203ENST00000559169 POM121CA8CG34 1229 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 GNAI1P63096 354 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 ATF7IPQ6VMQ6 1270 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 TBC1D2BQ9UPU7 963 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 A6NJR5 290 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 RIMBP2O15034 1052 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 MVPQ14764 893 aaKnown RBP8.3□□□□□ -1.08
LINS1-203ENST00000559169 RTF1Q92541 710 aaKnown RBP8.3□□□□□ -1.08
LINS1-203ENST00000559169 KDRP35968 1356 aa8.3□□□□□ -1.08
LINS1-203ENST00000559169 DMRTA1Q5VZB9 504 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 PNNQ9H307 717 aaKnown RBP8.29□□□□□ -1.08
LINS1-203ENST00000559169 SLAIN2Q9P270 581 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 CSB-PGBD3P0DP91 1061 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 EIF2S2P20042 333 aaKnown RBP8.29□□□□□ -1.08
LINS1-203ENST00000559169 SLC39A6Q13433 755 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 ZNF530Q6P9A1 599 aaPredicted RBP8.29□□□□□ -1.08
LINS1-203ENST00000559169 RDH13Q8NBN7 331 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 SYMPKQ92797 1274 aaKnown RBP8.29□□□□□ -1.08
LINS1-203ENST00000559169 STRN4Q9NRL3 753 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 IL16Q14005 1332 aa8.29□□□□□ -1.08
LINS1-203ENST00000559169 GNAT3A8MTJ3 354 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 CHL1O00533 1208 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 GPR37L1O60883 481 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 HOXB1P14653 301 aaPredicted RBP8.28□□□□□ -1.08
LINS1-203ENST00000559169 DNAJB2P25686 324 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 PDE3AQ14432 1141 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 NGEFQ8N5V2 710 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 EPS8L1Q8TE68 723 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 ZSWIM6Q9HCJ5 1215 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 SCUBE2Q9NQ36 999 aa8.28□□□□□ -1.08
LINS1-203ENST00000559169 PHRF1Q9P1Y6 1649 aaKnown RBP8.28□□□□□ -1.08
LINS1-203ENST00000559169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.08
LINS1-203ENST00000559169 ZBED2Q9BTP6 218 aa8.27□□□□□ -1.08
LINS1-203ENST00000559169 PHAXQ9H814 394 aaKnown RBP8.27□□□□□ -1.08
LINS1-203ENST00000559169 USP19O94966 1318 aa8.27□□□□□ -1.09
LINS1-203ENST00000559169 ERBB3P21860 1342 aa8.27□□□□□ -1.09
LINS1-203ENST00000559169 USP54Q70EL1 1684 aa8.27□□□□□ -1.09
LINS1-203ENST00000559169 SLIT3O75094 1523 aa8.27□□□□□ -1.09
LINS1-203ENST00000559169 MEGF6O75095 1541 aa8.27□□□□□ -1.09
LINS1-203ENST00000559169 MAP3K5Q99683 1374 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms