RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
CHRNA3-205ENST00000559080 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
CHRNA3-205ENST00000559080 TAF1DQ9H5J8 278 aaPredicted RBP15.09■□□□□ 0.01
CHRNA3-205ENST00000559080 TRPM7Q96QT4 1865 aa15.09■□□□□ 0.01
CHRNA3-205ENST00000559080 CAMTA2O94983 1202 aa15.08■□□□□ 0
CHRNA3-205ENST00000559080 ZNF790Q6PG37 636 aa15.08■□□□□ 0
CHRNA3-205ENST00000559080 TTC5Q8N0Z6 440 aa15.08■□□□□ 0
CHRNA3-205ENST00000559080 WBP1LQ9NX94 342 aa15.08■□□□□ 0
CHRNA3-205ENST00000559080 IQCA1LA6NCM1 817 aa15.07■□□□□ 0
CHRNA3-205ENST00000559080 TMEM88BA6NKF7 163 aa15.07■□□□□ 0
CHRNA3-205ENST00000559080 DIAPH1O60610 1272 aaKnown RBP15.07■□□□□ 0
CHRNA3-205ENST00000559080 CTCFP49711 727 aaPredicted RBP15.07■□□□□ 0
CHRNA3-205ENST00000559080 CNBD1Q8NA66 436 aa15.07■□□□□ 0
CHRNA3-205ENST00000559080 IL17REQ8NFR9 667 aa15.07■□□□□ 0
CHRNA3-205ENST00000559080 MASTLQ96GX5 879 aa15.07■□□□□ 0
CHRNA3-205ENST00000559080 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
CHRNA3-205ENST00000559080 THSD7BQ9C0I4 1608 aa15.06■□□□□ 0
CHRNA3-205ENST00000559080 A1BGP04217 495 aa15.06■□□□□ 0
CHRNA3-205ENST00000559080 SOGA3Q5TF21 947 aa15.06■□□□□ 0
CHRNA3-205ENST00000559080 SETDB2Q96T68 719 aa15.06■□□□□ 0
CHRNA3-205ENST00000559080 ZNF330Q9Y3S2 320 aaPredicted RBP15.06■□□□□ 0
CHRNA3-205ENST00000559080 COL3A1P02461 1466 aaPredicted RBP15.06■□□□□ 0
CHRNA3-205ENST00000559080 SLC34A2O95436 690 aa15.05■□□□□ -0
CHRNA3-205ENST00000559080 LBX1P52954 281 aa15.05■□□□□ -0
CHRNA3-205ENST00000559080 ZNF541Q9H0D2 1346 aa15.05■□□□□ -0
CHRNA3-205ENST00000559080 LTBP1Q14766 1721 aa15.05■□□□□ -0
CHRNA3-205ENST00000559080 NUP98P52948 1817 aa15.04■□□□□ -0
CHRNA3-205ENST00000559080 ST5P78524 1137 aa15.04■□□□□ -0
CHRNA3-205ENST00000559080 SNED1Q8TER0 1413 aa15.03■□□□□ -0
CHRNA3-205ENST00000559080 RASSF10A6NK89 507 aa15.03■□□□□ -0
CHRNA3-205ENST00000559080 CCDC93Q567U6 631 aa15.03■□□□□ -0
CHRNA3-205ENST00000559080 DZIP3Q86Y13 1208 aaKnown RBP15.03■□□□□ -0
CHRNA3-205ENST00000559080 AIDAQ96BJ3 306 aa15.03■□□□□ -0
CHRNA3-205ENST00000559080 CEMIPQ8WUJ3 1361 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 KLRG2A4D1S0 409 aaPredicted RBP15.02■□□□□ -0
CHRNA3-205ENST00000559080 GNAT3A8MTJ3 354 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 U2SURPO15042 1029 aaKnown RBP15.02■□□□□ -0
CHRNA3-205ENST00000559080 KCNQ3O43525 872 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 HSPA8P11142 646 aaKnown RBP15.02■□□□□ -0
CHRNA3-205ENST00000559080 EPHX2P34913 555 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 FKBP4Q02790 459 aaKnown RBP eCLIP15.02■□□□□ -0
CHRNA3-205ENST00000559080 TEFQ10587 303 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 EAPPQ56P03 285 aaPredicted RBP15.02■□□□□ -0
CHRNA3-205ENST00000559080 OLFM4Q6UX06 510 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 CFAP53Q96M91 514 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 ZNF277Q9NRM2 450 aaPredicted RBP15.02■□□□□ -0
CHRNA3-205ENST00000559080 HACL1Q9UJ83 578 aa15.02■□□□□ -0
CHRNA3-205ENST00000559080 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 COL4A5P29400 1685 aa15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 NPHP1O15259 732 aa15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 PIP4K2AP48426 406 aaPredicted RBP15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 DEFB115Q30KQ5 88 aa15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 ABHD8Q96I13 439 aa15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
CHRNA3-205ENST00000559080 FZD9O00144 591 aa15□□□□□ -0.01
CHRNA3-205ENST00000559080 NPR1P16066 1061 aa15□□□□□ -0.01
CHRNA3-205ENST00000559080 MAP1SQ66K74 1059 aaPredicted RBP15□□□□□ -0.01
CHRNA3-205ENST00000559080 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
CHRNA3-205ENST00000559080 CNTROBQ8N137 903 aa15□□□□□ -0.01
CHRNA3-205ENST00000559080 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
CHRNA3-205ENST00000559080 CASP8AP2Q9UKL3 1982 aa15□□□□□ -0.01
CHRNA3-205ENST00000559080 WDR33Q9C0J8 1336 aaKnown RBP14.99□□□□□ -0.01
CHRNA3-205ENST00000559080 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
CHRNA3-205ENST00000559080 PRAMEF22A3QJZ6 481 aa14.99□□□□□ -0.01
CHRNA3-205ENST00000559080 FAM161AQ3B820 660 aa14.99□□□□□ -0.01
CHRNA3-205ENST00000559080 NBPF5PQ86XG9 351 aaPredicted RBP14.99□□□□□ -0.01
CHRNA3-205ENST00000559080 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
CHRNA3-205ENST00000559080 IARSP41252 1262 aaKnown RBP14.98□□□□□ -0.01
CHRNA3-205ENST00000559080 NPM2Q86SE8 214 aaKnown RBP14.98□□□□□ -0.01
CHRNA3-205ENST00000559080 PNMA8AQ86V59 439 aaPredicted RBP14.98□□□□□ -0.01
CHRNA3-205ENST00000559080 PPP2R1AP30153 589 aa14.97□□□□□ -0.01
CHRNA3-205ENST00000559080 MAP2K1Q02750 393 aaPredicted RBP14.97□□□□□ -0.01
CHRNA3-205ENST00000559080 RTKN2Q8IZC4 609 aa14.97□□□□□ -0.01
CHRNA3-205ENST00000559080 GPC2Q8N158 579 aa14.97□□□□□ -0.01
CHRNA3-205ENST00000559080 DLG5Q8TDM6 1919 aa14.96□□□□□ -0.01
CHRNA3-205ENST00000559080 BTBD11A6QL63 1104 aa14.96□□□□□ -0.01
CHRNA3-205ENST00000559080 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHRNA3-205ENST00000559080 SYNE4Q8N205 404 aa14.96□□□□□ -0.01
CHRNA3-205ENST00000559080 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
CHRNA3-205ENST00000559080 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 NBPF10Q6P3W6 841 aaKnown RBP14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 TPTE2Q6XPS3 522 aa14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 NBPF15Q8N660 670 aa14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 PHACTR3Q96KR7 559 aa14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 DDX21Q9NR30 783 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 NIP7Q9Y221 180 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHRNA3-205ENST00000559080 RGL2O15211 777 aa14.94□□□□□ -0.02
CHRNA3-205ENST00000559080 RGS19P49795 217 aa14.94□□□□□ -0.02
CHRNA3-205ENST00000559080 PSMD1Q99460 953 aa14.94□□□□□ -0.02
CHRNA3-205ENST00000559080 ABT1Q9ULW3 272 aaKnown RBP14.94□□□□□ -0.02
CHRNA3-205ENST00000559080 ZNF652Q9Y2D9 606 aa14.94□□□□□ -0.02
CHRNA3-205ENST00000559080 ALDH1B1P30837 517 aa14.93□□□□□ -0.02
CHRNA3-205ENST00000559080 HLFQ16534 295 aa14.93□□□□□ -0.02
CHRNA3-205ENST00000559080 KDM3BQ7LBC6 1761 aa14.93□□□□□ -0.02
CHRNA3-205ENST00000559080 POLR2AP24928 1970 aaKnown RBP14.93□□□□□ -0.02
CHRNA3-205ENST00000559080 FAM177BA6PVY3 158 aa14.92□□□□□ -0.02
CHRNA3-205ENST00000559080 SNRPA1P09661 255 aaKnown RBP14.92□□□□□ -0.02
CHRNA3-205ENST00000559080 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
CHRNA3-205ENST00000559080 PRKAR2BP31323 418 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms