RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 TUBGCP6Q96RT7 1819 aa16.24■□□□□ 0.19
CPNE6-210ENST00000558995 KDM3BQ7LBC6 1761 aa16.24■□□□□ 0.19
CPNE6-210ENST00000558995 SRGAP3O43295 1099 aa16.24■□□□□ 0.19
CPNE6-210ENST00000558995 NCLP19338 710 aaKnown RBP16.24■□□□□ 0.19
CPNE6-210ENST00000558995 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
CPNE6-210ENST00000558995 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
CPNE6-210ENST00000558995 PI4KAP2A4QPH2 592 aa16.23■□□□□ 0.19
CPNE6-210ENST00000558995 ESPNB1AK53 854 aa16.23■□□□□ 0.19
CPNE6-210ENST00000558995 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
CPNE6-210ENST00000558995 PI4KAP1Q8N8J0 262 aa16.23■□□□□ 0.19
CPNE6-210ENST00000558995 NBPF7P0C2Y1 421 aaPredicted RBP16.23■□□□□ 0.19
CPNE6-210ENST00000558995 CCDC173Q0VFZ6 552 aa16.23■□□□□ 0.19
CPNE6-210ENST00000558995 COL18A1P39060 1754 aa16.23■□□□□ 0.19
CPNE6-210ENST00000558995 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
CPNE6-210ENST00000558995 SLC39A6Q13433 755 aa16.22■□□□□ 0.19
CPNE6-210ENST00000558995 HSP90AB4PQ58FF6 505 aa16.22■□□□□ 0.19
CPNE6-210ENST00000558995 PI4K2BQ8TCG2 481 aa16.22■□□□□ 0.19
CPNE6-210ENST00000558995 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
CPNE6-210ENST00000558995 ANP32BQ92688 251 aaKnown RBP16.22■□□□□ 0.19
CPNE6-210ENST00000558995 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
CPNE6-210ENST00000558995 HSPA4P34932 840 aa16.21■□□□□ 0.19
CPNE6-210ENST00000558995 PROSER3Q2NL68 480 aa16.21■□□□□ 0.19
CPNE6-210ENST00000558995 BRD1O95696 1058 aa16.21■□□□□ 0.19
CPNE6-210ENST00000558995 PHKG2P15735 406 aa16.21■□□□□ 0.19
CPNE6-210ENST00000558995 AK9Q5TCS8 1911 aa16.21■□□□□ 0.19
CPNE6-210ENST00000558995 KDM6AO15550 1401 aaPredicted RBP16.21■□□□□ 0.18
CPNE6-210ENST00000558995 GPT2Q8TD30 523 aa16.21■□□□□ 0.18
CPNE6-210ENST00000558995 NFATC2IPQ8NCF5 419 aa16.2■□□□□ 0.18
CPNE6-210ENST00000558995 DBF4Q9UBU7 674 aaPredicted RBP16.2■□□□□ 0.18
CPNE6-210ENST00000558995 IL25Q9H293 177 aa16.2■□□□□ 0.18
CPNE6-210ENST00000558995 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
CPNE6-210ENST00000558995 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
CPNE6-210ENST00000558995 CPDO75976 1380 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 OVOS2A0A0G2JMS6 1433 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 CRYBG1Q9Y4K1 1723 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 CYP27B1O15528 508 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 SGSM2O43147 1006 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 CNTROBQ8N137 903 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 ADCY9O60503 1353 aa16.19■□□□□ 0.18
CPNE6-210ENST00000558995 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
CPNE6-210ENST00000558995 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
CPNE6-210ENST00000558995 MTX1Q13505 466 aa16.18■□□□□ 0.18
CPNE6-210ENST00000558995 PLCD3Q8N3E9 789 aa16.18■□□□□ 0.18
CPNE6-210ENST00000558995 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
CPNE6-210ENST00000558995 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
CPNE6-210ENST00000558995 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
CPNE6-210ENST00000558995 MAP4K4O95819 1239 aaPredicted RBP16.18■□□□□ 0.18
CPNE6-210ENST00000558995 RAD50Q92878 1312 aa16.18■□□□□ 0.18
CPNE6-210ENST00000558995 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
CPNE6-210ENST00000558995 MBD3O95983 291 aa16.17■□□□□ 0.18
CPNE6-210ENST00000558995 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
CPNE6-210ENST00000558995 ZNF790Q6PG37 636 aa16.17■□□□□ 0.18
CPNE6-210ENST00000558995 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
CPNE6-210ENST00000558995 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
CPNE6-210ENST00000558995 TTC41PQ6P2S7 1318 aa16.17■□□□□ 0.18
CPNE6-210ENST00000558995 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
CPNE6-210ENST00000558995 HDAC5Q9UQL6 1122 aa16.17■□□□□ 0.18
CPNE6-210ENST00000558995 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
CPNE6-210ENST00000558995 CHAMP1Q96JM3 812 aa16.16■□□□□ 0.18
CPNE6-210ENST00000558995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.18
CPNE6-210ENST00000558995 OS9Q13438 667 aaPredicted RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 LSG1Q9H089 658 aaKnown RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 RBSNQ9H1K0 784 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 TOM1L2Q6ZVM7 507 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 TMEM63CQ9P1W3 806 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 SNX14Q9Y5W7 946 aa16.15■□□□□ 0.18
CPNE6-210ENST00000558995 SIPA1L3O60292 1781 aaPredicted RBP16.15■□□□□ 0.18
CPNE6-210ENST00000558995 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
CPNE6-210ENST00000558995 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
CPNE6-210ENST00000558995 LRSAM1Q6UWE0 723 aa16.14■□□□□ 0.17
CPNE6-210ENST00000558995 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
CPNE6-210ENST00000558995 HOMEZQ8IX15 550 aa16.14■□□□□ 0.17
CPNE6-210ENST00000558995 ZNF496Q96IT1 587 aaPredicted RBP16.14■□□□□ 0.17
CPNE6-210ENST00000558995 WDR17Q8IZU2 1322 aa16.13■□□□□ 0.17
CPNE6-210ENST00000558995 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
CPNE6-210ENST00000558995 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
CPNE6-210ENST00000558995 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
CPNE6-210ENST00000558995 TTC14Q96N46 770 aa16.13■□□□□ 0.17
CPNE6-210ENST00000558995 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
CPNE6-210ENST00000558995 NSFL1CQ9UNZ2 370 aaKnown RBP16.13■□□□□ 0.17
CPNE6-210ENST00000558995 PDIA6Q15084 440 aa16.12■□□□□ 0.17
CPNE6-210ENST00000558995 CWC27Q6UX04 472 aaKnown RBP16.12■□□□□ 0.17
CPNE6-210ENST00000558995 RUFY2Q8WXA3 655 aa16.12■□□□□ 0.17
CPNE6-210ENST00000558995 STRN4Q9NRL3 753 aa16.12■□□□□ 0.17
CPNE6-210ENST00000558995 ECHDC1Q9NTX5 307 aa16.12■□□□□ 0.17
CPNE6-210ENST00000558995 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
CPNE6-210ENST00000558995 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
CPNE6-210ENST00000558995 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
CPNE6-210ENST00000558995 GPATCH3Q96I76 525 aa16.12■□□□□ 0.17
CPNE6-210ENST00000558995 ABCC6O95255 1503 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms