RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
CLPX-203ENST00000558958 NPM2Q86SE8 214 aaKnown RBP22.92■■□□□ 1.26
CLPX-203ENST00000558958 EXOC6Q8TAG9 804 aa22.92■■□□□ 1.26
CLPX-203ENST00000558958 GNPATO15228 680 aa22.91■■□□□ 1.26
CLPX-203ENST00000558958 BAG6P46379 1132 aa22.91■■□□□ 1.26
CLPX-203ENST00000558958 CCT4P50991 539 aaKnown RBP22.91■■□□□ 1.26
CLPX-203ENST00000558958 EN1Q05925 392 aaPredicted RBP22.91■■□□□ 1.26
CLPX-203ENST00000558958 ITPRIPQ8IWB1 547 aa22.91■■□□□ 1.26
CLPX-203ENST00000558958 KIF6Q6ZMV9 814 aa22.9■■□□□ 1.26
CLPX-203ENST00000558958 AK7Q96M32 723 aa22.9■■□□□ 1.26
CLPX-203ENST00000558958 COL15A1P39059 1388 aa22.89■■□□□ 1.26
CLPX-203ENST00000558958 MAP3K15Q6ZN16 1313 aa22.89■■□□□ 1.25
CLPX-203ENST00000558958 EZH2Q15910 746 aaKnown RBP22.89■■□□□ 1.25
CLPX-203ENST00000558958 DZIP3Q86Y13 1208 aaKnown RBP22.89■■□□□ 1.25
CLPX-203ENST00000558958 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
CLPX-203ENST00000558958 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.25
CLPX-203ENST00000558958 BEND3Q5T5X7 828 aa22.88■■□□□ 1.25
CLPX-203ENST00000558958 ERICH6BQ5W0A0 696 aa22.88■■□□□ 1.25
CLPX-203ENST00000558958 METTL22Q9BUU2 404 aaPredicted RBP22.88■■□□□ 1.25
CLPX-203ENST00000558958 ZBTB3Q9H5J0 574 aa22.88■■□□□ 1.25
CLPX-203ENST00000558958 DDX19BQ9UMR2 479 aa22.88■■□□□ 1.25
CLPX-203ENST00000558958 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
CLPX-203ENST00000558958 A0A087WZG4 1122 aa22.87■■□□□ 1.25
CLPX-203ENST00000558958 ARXQ96QS3 562 aa22.87■■□□□ 1.25
CLPX-203ENST00000558958 TBC1D2BQ9UPU7 963 aa22.87■■□□□ 1.25
CLPX-203ENST00000558958 ERVV-1B6SEH8 477 aa22.86■■□□□ 1.25
CLPX-203ENST00000558958 DEFB132Q7Z7B7 95 aa22.86■■□□□ 1.25
CLPX-203ENST00000558958 AMIGO3Q86WK7 504 aa22.86■■□□□ 1.25
CLPX-203ENST00000558958 SRCIN1Q9C0H9 1055 aa22.86■■□□□ 1.25
CLPX-203ENST00000558958 NUP188Q5SRE5 1749 aa22.86■■□□□ 1.25
CLPX-203ENST00000558958 ARFGEF2Q9Y6D5 1785 aa22.86■■□□□ 1.25
CLPX-203ENST00000558958 LINS1Q8NG48 757 aa22.85■■□□□ 1.25
CLPX-203ENST00000558958 N4BP2Q86UW6 1770 aaPredicted RBP22.85■■□□□ 1.25
CLPX-203ENST00000558958 NEXNQ0ZGT2 675 aa22.85■■□□□ 1.25
CLPX-203ENST00000558958 SMIM5Q71RC9 77 aa22.85■■□□□ 1.25
CLPX-203ENST00000558958 AKT1S1Q96B36 256 aa22.85■■□□□ 1.25
CLPX-203ENST00000558958 MYD88Q99836 296 aa22.85■■□□□ 1.25
CLPX-203ENST00000558958 ZBTB7BO15156 539 aaPredicted RBP22.84■■□□□ 1.25
CLPX-203ENST00000558958 ALDH1L1O75891 902 aa22.84■■□□□ 1.25
CLPX-203ENST00000558958 CAMTA2O94983 1202 aa22.84■■□□□ 1.25
CLPX-203ENST00000558958 IGKV5-2P06315 115 aa22.84■■□□□ 1.25
CLPX-203ENST00000558958 GIGYF2Q6Y7W6 1299 aaKnown RBP22.84■■□□□ 1.25
CLPX-203ENST00000558958 ADRA2BP18089 450 aa22.83■■□□□ 1.25
CLPX-203ENST00000558958 HLFQ16534 295 aa22.83■■□□□ 1.25
CLPX-203ENST00000558958 ZNF827Q17R98 1081 aa22.83■■□□□ 1.25
CLPX-203ENST00000558958 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
CLPX-203ENST00000558958 SSFA2P28290 1259 aa22.82■■□□□ 1.24
CLPX-203ENST00000558958 TCIRG1Q13488 830 aa22.82■■□□□ 1.24
CLPX-203ENST00000558958 CWF19L2Q2TBE0 894 aaKnown RBP22.82■■□□□ 1.24
CLPX-203ENST00000558958 TRAPPC3LQ5T215 181 aa22.82■■□□□ 1.24
CLPX-203ENST00000558958 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
CLPX-203ENST00000558958 IBTKQ9P2D0 1353 aaPredicted RBP22.81■■□□□ 1.24
CLPX-203ENST00000558958 NEURL1BA8MQ27 555 aa22.81■■□□□ 1.24
CLPX-203ENST00000558958 AAMPQ13685 434 aa22.81■■□□□ 1.24
CLPX-203ENST00000558958 UPF1Q92900 1129 aaKnown RBP eCLIP22.81■■□□□ 1.24
CLPX-203ENST00000558958 CHMP4BQ9H444 224 aaKnown RBP22.81■■□□□ 1.24
CLPX-203ENST00000558958 ZBTB40Q9NUA8 1239 aa22.81■■□□□ 1.24
CLPX-203ENST00000558958 NARFQ9UHQ1 456 aa22.81■■□□□ 1.24
CLPX-203ENST00000558958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.8■■□□□ 1.24
CLPX-203ENST00000558958 RGL2O15211 777 aa22.8■■□□□ 1.24
CLPX-203ENST00000558958 PHF14O94880 888 aa22.8■■□□□ 1.24
CLPX-203ENST00000558958 HSP90AB3PQ58FF7 597 aa22.8■■□□□ 1.24
CLPX-203ENST00000558958 ATP5J2-PTCD1G3V325 749 aa22.79■■□□□ 1.24
CLPX-203ENST00000558958 ISCA1Q9BUE6 129 aa22.79■■□□□ 1.24
CLPX-203ENST00000558958 TRIM28Q13263 835 aaKnown RBP22.79■■□□□ 1.24
CLPX-203ENST00000558958 CLEC4GQ6UXB4 293 aa22.79■■□□□ 1.24
CLPX-203ENST00000558958 MEIS3Q99687 375 aa22.79■■□□□ 1.24
CLPX-203ENST00000558958 USP44Q9H0E7 712 aa22.79■■□□□ 1.24
CLPX-203ENST00000558958 TFCP2L1Q9NZI6 479 aa22.79■■□□□ 1.24
CLPX-203ENST00000558958 ZPR1O75312 459 aa22.78■■□□□ 1.24
CLPX-203ENST00000558958 RFC4P35249 363 aa22.78■■□□□ 1.24
CLPX-203ENST00000558958 GCKRQ14397 625 aa22.78■■□□□ 1.24
CLPX-203ENST00000558958 BCORQ6W2J9 1755 aa22.78■■□□□ 1.24
CLPX-203ENST00000558958 NUP98P52948 1817 aa22.77■■□□□ 1.24
CLPX-203ENST00000558958 CCDC191Q8NCU4 936 aa22.77■■□□□ 1.24
CLPX-203ENST00000558958 BCL2L12Q9HB09 334 aa22.77■■□□□ 1.24
CLPX-203ENST00000558958 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
CLPX-203ENST00000558958 SRP68Q9UHB9 627 aaKnown RBP22.77■■□□□ 1.24
CLPX-203ENST00000558958 ZNF652Q9Y2D9 606 aa22.77■■□□□ 1.24
CLPX-203ENST00000558958 USP42Q9H9J4 1324 aaKnown RBP22.77■■□□□ 1.24
CLPX-203ENST00000558958 GNAI3P08754 354 aa22.76■■□□□ 1.23
CLPX-203ENST00000558958 USPL1Q5W0Q7 1092 aa22.76■■□□□ 1.23
CLPX-203ENST00000558958 ZNF34Q8IZ26 560 aa22.76■■□□□ 1.23
CLPX-203ENST00000558958 SCN7AQ01118 1682 aa22.76■■□□□ 1.23
CLPX-203ENST00000558958 C4AP0C0L4 1744 aa22.76■■□□□ 1.23
CLPX-203ENST00000558958 SLC15A2Q16348 729 aa22.75■■□□□ 1.23
CLPX-203ENST00000558958 CWC25Q9NXE8 425 aaPredicted RBP22.75■■□□□ 1.23
CLPX-203ENST00000558958 GRM8O00222 908 aa22.74■■□□□ 1.23
CLPX-203ENST00000558958 ILDR2Q71H61 639 aa22.74■■□□□ 1.23
CLPX-203ENST00000558958 FLAD1Q8NFF5 587 aa22.74■■□□□ 1.23
CLPX-203ENST00000558958 PPP4R2Q9NY27 417 aa22.74■■□□□ 1.23
CLPX-203ENST00000558958 STK32BQ9NY57 414 aa22.74■■□□□ 1.23
CLPX-203ENST00000558958 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
CLPX-203ENST00000558958 UTYO14607 1347 aa22.74■■□□□ 1.23
CLPX-203ENST00000558958 NBPF7P0C2Y1 421 aaPredicted RBP22.73■■□□□ 1.23
CLPX-203ENST00000558958 GPTP24298 496 aa22.73■■□□□ 1.23
CLPX-203ENST00000558958 NLRP10Q86W26 655 aa22.73■■□□□ 1.23
CLPX-203ENST00000558958 ANKRD36CQ5JPF3 1778 aa22.73■■□□□ 1.23
CLPX-203ENST00000558958 UBTFL1P0CB47 393 aaPredicted RBP22.73■■□□□ 1.23
CLPX-203ENST00000558958 AFDNP55196 1824 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms