RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ATXN7O15265 892 aaPredicted RBP7.35□□□□□ -1.23
VPS13C-207ENST00000558919 BNIP3LO60238 219 aa7.35□□□□□ -1.23
VPS13C-207ENST00000558919 SLURP2P0DP57 97 aa7.35□□□□□ -1.23
VPS13C-207ENST00000558919 CLP1Q92989 425 aaKnown RBP7.35□□□□□ -1.23
VPS13C-207ENST00000558919 NEUROD4Q9HD90 331 aa7.35□□□□□ -1.23
VPS13C-207ENST00000558919 ANKIB1Q9P2G1 1089 aa7.35□□□□□ -1.23
VPS13C-207ENST00000558919 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
VPS13C-207ENST00000558919 MX2P20592 715 aa7.34□□□□□ -1.23
VPS13C-207ENST00000558919 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
VPS13C-207ENST00000558919 OCLNQ16625 522 aa7.34□□□□□ -1.23
VPS13C-207ENST00000558919 HIF1AQ16665 826 aa7.34□□□□□ -1.23
VPS13C-207ENST00000558919 ZSCAN1Q8NBB4 408 aa7.34□□□□□ -1.23
VPS13C-207ENST00000558919 VTI1AQ96AJ9 217 aa7.34□□□□□ -1.23
VPS13C-207ENST00000558919 ABHD17AQ96GS6 310 aa7.34□□□□□ -1.23
VPS13C-207ENST00000558919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS13C-207ENST00000558919 PRMT3O60678 531 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 FAM157BP0CG42 384 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 TNP2Q05952 138 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 RTN1Q16799 776 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 LRRC69Q6ZNQ3 347 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 NGLY1Q96IV0 654 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
VPS13C-207ENST00000558919 ADAMTS2O95450 1211 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 MAPTP10636 758 aaKnown RBP7.32□□□□□ -1.24
VPS13C-207ENST00000558919 FGFR3P22607 806 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 MAP2K3P46734 347 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 LAMC2Q13753 1193 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 SUSD3Q96L08 255 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 ARID3AQ99856 593 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 CXXC1Q9P0U4 656 aaPredicted RBP7.32□□□□□ -1.24
VPS13C-207ENST00000558919 IGF1RP08069 1367 aa7.32□□□□□ -1.24
VPS13C-207ENST00000558919 KHNYNO15037 678 aaKnown RBP7.31□□□□□ -1.24
VPS13C-207ENST00000558919 FKBP5Q13451 457 aaPredicted RBP7.31□□□□□ -1.24
VPS13C-207ENST00000558919 SUZ12Q15022 739 aaKnown RBP7.31□□□□□ -1.24
VPS13C-207ENST00000558919 FAM182BQ5T319 152 aa7.31□□□□□ -1.24
VPS13C-207ENST00000558919 COL26A1Q96A83 441 aa7.31□□□□□ -1.24
VPS13C-207ENST00000558919 KLRG1Q96E93 195 aa7.31□□□□□ -1.24
VPS13C-207ENST00000558919 MYO19Q96H55 970 aa7.31□□□□□ -1.24
VPS13C-207ENST00000558919 DCDC2BA2VCK2 349 aa7.3□□□□□ -1.24
VPS13C-207ENST00000558919 TMEM88BA6NKF7 163 aa7.3□□□□□ -1.24
VPS13C-207ENST00000558919 EFSO43281 561 aa7.3□□□□□ -1.24
VPS13C-207ENST00000558919 QTRT2Q9H974 415 aaKnown RBP7.3□□□□□ -1.24
VPS13C-207ENST00000558919 FAM181BA6NEQ2 426 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 PTCD1O75127 700 aaKnown RBP7.29□□□□□ -1.24
VPS13C-207ENST00000558919 BMP4P12644 408 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 CTBSQ01459 385 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 IER5Q5VY09 327 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 ZNF280CQ8ND82 737 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 HSH2DQ96JZ2 352 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 SLAIN2Q9P270 581 aa7.29□□□□□ -1.24
VPS13C-207ENST00000558919 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
VPS13C-207ENST00000558919 C2CD2LO14523 706 aa7.28□□□□□ -1.24
VPS13C-207ENST00000558919 ATP2B4P23634 1241 aa7.28□□□□□ -1.24
VPS13C-207ENST00000558919 C11orf91Q3C1V1 193 aa7.28□□□□□ -1.24
VPS13C-207ENST00000558919 ZNF385CQ66K41 422 aaPredicted RBP7.28□□□□□ -1.24
VPS13C-207ENST00000558919 HCN2Q9UL51 889 aa7.28□□□□□ -1.24
VPS13C-207ENST00000558919 CD33P20138 364 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 KCNQ4P56696 695 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 TYRO3Q06418 890 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 BTLAQ7Z6A9 289 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 CEP63Q96MT8 703 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 LRRC4BQ9NT99 713 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 USTQ9Y2C2 406 aa7.27□□□□□ -1.25
VPS13C-207ENST00000558919 CELA2BP08218 269 aaPredicted RBP7.26□□□□□ -1.25
VPS13C-207ENST00000558919 DGKZQ13574 1117 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 SVOPQ8N4V2 548 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 WHAMMQ8TF30 809 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 ACDQ96AP0 544 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
VPS13C-207ENST00000558919 BRD7Q9NPI1 651 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 AVENQ9NQS1 362 aaPredicted RBP7.26□□□□□ -1.25
VPS13C-207ENST00000558919 STRN4Q9NRL3 753 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 KLK14Q9P0G3 267 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 DMGDHQ9UI17 866 aaKnown RBP7.26□□□□□ -1.25
VPS13C-207ENST00000558919 GDF2Q9UK05 429 aaPredicted RBP7.26□□□□□ -1.25
VPS13C-207ENST00000558919 BCS1LQ9Y276 419 aa7.26□□□□□ -1.25
VPS13C-207ENST00000558919 ARAFP10398 606 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 BCRP11274 1271 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 MAP3K10Q02779 954 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
VPS13C-207ENST00000558919 COX20Q5RI15 118 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 C16orf46Q6P387 395 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 LRFN2Q9ULH4 789 aa7.25□□□□□ -1.25
VPS13C-207ENST00000558919 ARHGEF15O94989 841 aa7.24□□□□□ -1.25
VPS13C-207ENST00000558919 SSFA2P28290 1259 aa7.24□□□□□ -1.25
VPS13C-207ENST00000558919 MKNK1Q9BUB5 465 aa7.24□□□□□ -1.25
VPS13C-207ENST00000558919 ENAMQ9NRM1 1142 aa7.24□□□□□ -1.25
VPS13C-207ENST00000558919 KCNH4Q9UQ05 1017 aa7.24□□□□□ -1.25
VPS13C-207ENST00000558919 PDE4CQ08493 712 aa7.23□□□□□ -1.25
VPS13C-207ENST00000558919 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
VPS13C-207ENST00000558919 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
VPS13C-207ENST00000558919 IFT43Q96FT9 208 aa7.23□□□□□ -1.25
VPS13C-207ENST00000558919 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
VPS13C-207ENST00000558919 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
VPS13C-207ENST00000558919 OIP5O43482 229 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 MICAL2O94851 1124 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 BRD2P25440 801 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms