RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, humanhuman

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-208ENST00000558904 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
RORA-208ENST00000558904 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
RORA-208ENST00000558904 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
RORA-208ENST00000558904 MASTLQ96GX5 879 aa12.02□□□□□ -0.49
RORA-208ENST00000558904 TEX13AQ9BXU3 409 aaPredicted RBP12.02□□□□□ -0.49
RORA-208ENST00000558904 TJP1Q07157 1748 aa12.02□□□□□ -0.49
RORA-208ENST00000558904 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.49
RORA-208ENST00000558904 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
RORA-208ENST00000558904 EIF5P55010 431 aaKnown RBP12.01□□□□□ -0.49
RORA-208ENST00000558904 ST5P78524 1137 aa12.01□□□□□ -0.49
RORA-208ENST00000558904 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
RORA-208ENST00000558904 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
RORA-208ENST00000558904 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
RORA-208ENST00000558904 SETDB2Q96T68 719 aa12.01□□□□□ -0.49
RORA-208ENST00000558904 ABT1Q9ULW3 272 aaKnown RBP12.01□□□□□ -0.49
RORA-208ENST00000558904 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
RORA-208ENST00000558904 EPHX2P34913 555 aa12□□□□□ -0.49
RORA-208ENST00000558904 CARMIL3Q8ND23 1372 aa12□□□□□ -0.49
RORA-208ENST00000558904 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
RORA-208ENST00000558904 SRGNP10124 158 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 TBC1D9BQ66K14 1250 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 PRPF40BQ6NWY9 871 aaKnown RBP11.99□□□□□ -0.49
RORA-208ENST00000558904 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 RTKN2Q8IZC4 609 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 TTC5Q8N0Z6 440 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
RORA-208ENST00000558904 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
RORA-208ENST00000558904 CA12O43570 354 aa11.98□□□□□ -0.49
RORA-208ENST00000558904 IL6STP40189 918 aaPredicted RBP11.98□□□□□ -0.49
RORA-208ENST00000558904 LGR6Q9HBX8 967 aa11.98□□□□□ -0.49
RORA-208ENST00000558904 MAP2K2P36507 400 aa11.97□□□□□ -0.49
RORA-208ENST00000558904 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
RORA-208ENST00000558904 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
RORA-208ENST00000558904 GPC2Q8N158 579 aa11.97□□□□□ -0.49
RORA-208ENST00000558904 GPR101Q96P66 508 aaPredicted RBP11.97□□□□□ -0.49
RORA-208ENST00000558904 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
RORA-208ENST00000558904 NPR1P16066 1061 aa11.96□□□□□ -0.49
RORA-208ENST00000558904 ALDH1B1P30837 517 aa11.96□□□□□ -0.49
RORA-208ENST00000558904 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
RORA-208ENST00000558904 MORC1Q86VD1 984 aa11.96□□□□□ -0.49
RORA-208ENST00000558904 CAPNS2Q96L46 248 aa11.96□□□□□ -0.49
RORA-208ENST00000558904 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
RORA-208ENST00000558904 TBC1D2BQ9UPU7 963 aa11.96□□□□□ -0.49
RORA-208ENST00000558904 FZD9O00144 591 aa11.95□□□□□ -0.5
RORA-208ENST00000558904 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
RORA-208ENST00000558904 EVX2Q03828 476 aa11.95□□□□□ -0.5
RORA-208ENST00000558904 C7orf43Q8WVR3 580 aa11.95□□□□□ -0.5
RORA-208ENST00000558904 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
RORA-208ENST00000558904 IL13P35225 146 aa11.94□□□□□ -0.5
RORA-208ENST00000558904 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
RORA-208ENST00000558904 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
RORA-208ENST00000558904 CCDC24Q8N4L8 307 aa11.94□□□□□ -0.5
RORA-208ENST00000558904 POLR3GLQ9BT43 218 aa11.94□□□□□ -0.5
RORA-208ENST00000558904 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
RORA-208ENST00000558904 SLX4Q8IY92 1834 aa11.94□□□□□ -0.5
RORA-208ENST00000558904 ANKRD31Q8N7Z5 1873 aa11.93□□□□□ -0.5
RORA-208ENST00000558904 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
RORA-208ENST00000558904 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
RORA-208ENST00000558904 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
RORA-208ENST00000558904 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
RORA-208ENST00000558904 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
RORA-208ENST00000558904 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
RORA-208ENST00000558904 NBPF5PQ86XG9 351 aaPredicted RBP11.93□□□□□ -0.5
RORA-208ENST00000558904 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
RORA-208ENST00000558904 ZNF652Q9Y2D9 606 aa11.93□□□□□ -0.5
RORA-208ENST00000558904 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 MRC1P22897 1456 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
RORA-208ENST00000558904 HAX1O00165 279 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 TEFQ10587 303 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
RORA-208ENST00000558904 SYNE4Q8N205 404 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
RORA-208ENST00000558904 RGL2O15211 777 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 CAMTA2O94983 1202 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 GRM1Q13255 1194 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 HHIPL1Q96JK4 782 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 PSMD1Q99460 953 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 PANK3Q9H999 370 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 ADAMTSL1Q8N6G6 1762 aa11.91□□□□□ -0.5
RORA-208ENST00000558904 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.5
RORA-208ENST00000558904 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
RORA-208ENST00000558904 MTHFSDQ2M296 383 aaKnown RBP11.9□□□□□ -0.5
RORA-208ENST00000558904 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
RORA-208ENST00000558904 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
RORA-208ENST00000558904 FMNL2Q96PY5 1086 aa11.9□□□□□ -0.5
RORA-208ENST00000558904 COL11A2P13942 1736 aaPredicted RBP11.89□□□□□ -0.51
RORA-208ENST00000558904 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
RORA-208ENST00000558904 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
RORA-208ENST00000558904 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
RORA-208ENST00000558904 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
RORA-208ENST00000558904 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
RORA-208ENST00000558904 DGKZQ13574 1117 aa11.88□□□□□ -0.51
RORA-208ENST00000558904 CST9Q5W186 159 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms