RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 SUV39H2Q9H5I1 410 aa8.35□□□□□ -1.07
PDE8A-209ENST00000558543 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
PDE8A-209ENST00000558543 TFIP11Q9UBB9 837 aaKnown RBP8.35□□□□□ -1.07
PDE8A-209ENST00000558543 HCN4Q9Y3Q4 1203 aa8.35□□□□□ -1.07
PDE8A-209ENST00000558543 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
PDE8A-209ENST00000558543 EML1O00423 815 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 EFSO43281 561 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 FAM182BQ5T319 152 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 LINC00114Q6XXX2 140 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 FNBP4Q8N3X1 1017 aaPredicted RBP8.34□□□□□ -1.07
PDE8A-209ENST00000558543 RHPN1Q8TCX5 695 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 SPOCK3Q9BQ16 436 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 MARK1Q9P0L2 795 aa8.34□□□□□ -1.07
PDE8A-209ENST00000558543 MSTNO14793 375 aa8.33□□□□□ -1.08
PDE8A-209ENST00000558543 RASA1P20936 1047 aa8.33□□□□□ -1.08
PDE8A-209ENST00000558543 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
PDE8A-209ENST00000558543 LARGE2Q8N3Y3 721 aa8.33□□□□□ -1.08
PDE8A-209ENST00000558543 HSH2DQ96JZ2 352 aa8.33□□□□□ -1.08
PDE8A-209ENST00000558543 RBM19Q9Y4C8 960 aaKnown RBP8.33□□□□□ -1.08
PDE8A-209ENST00000558543 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
PDE8A-209ENST00000558543 LGR5O75473 907 aa8.32□□□□□ -1.08
PDE8A-209ENST00000558543 PSMA6P60900 246 aaKnown RBP8.32□□□□□ -1.08
PDE8A-209ENST00000558543 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
PDE8A-209ENST00000558543 C7orf43Q8WVR3 580 aa8.32□□□□□ -1.08
PDE8A-209ENST00000558543 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
PDE8A-209ENST00000558543 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
PDE8A-209ENST00000558543 DGKGP49619 791 aa8.31□□□□□ -1.08
PDE8A-209ENST00000558543 SFSWAPQ12872 951 aaKnown RBP8.31□□□□□ -1.08
PDE8A-209ENST00000558543 SIX5Q8N196 739 aa8.31□□□□□ -1.08
PDE8A-209ENST00000558543 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
PDE8A-209ENST00000558543 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
PDE8A-209ENST00000558543 GNB5O14775 395 aa8.3□□□□□ -1.08
PDE8A-209ENST00000558543 PROCP04070 461 aa8.3□□□□□ -1.08
PDE8A-209ENST00000558543 SYT9Q86SS6 491 aa8.3□□□□□ -1.08
PDE8A-209ENST00000558543 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
PDE8A-209ENST00000558543 DKK1O94907 266 aa8.29□□□□□ -1.08
PDE8A-209ENST00000558543 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
PDE8A-209ENST00000558543 ZNF280CQ8ND82 737 aa8.29□□□□□ -1.08
PDE8A-209ENST00000558543 GAS2L2Q8NHY3 880 aa8.29□□□□□ -1.08
PDE8A-209ENST00000558543 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
PDE8A-209ENST00000558543 NGLY1Q96IV0 654 aa8.29□□□□□ -1.08
PDE8A-209ENST00000558543 SLC30A3Q99726 388 aa8.29□□□□□ -1.08
PDE8A-209ENST00000558543 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
PDE8A-209ENST00000558543 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
PDE8A-209ENST00000558543 C21orf2O43822 256 aa8.28□□□□□ -1.08
PDE8A-209ENST00000558543 LAMC2Q13753 1193 aa8.28□□□□□ -1.08
PDE8A-209ENST00000558543 SCG3Q8WXD2 468 aaKnown RBP8.28□□□□□ -1.08
PDE8A-209ENST00000558543 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
PDE8A-209ENST00000558543 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
PDE8A-209ENST00000558543 M0R2N6 131 aa8.27□□□□□ -1.09
PDE8A-209ENST00000558543 CRTC2Q53ET0 693 aaPredicted RBP8.27□□□□□ -1.09
PDE8A-209ENST00000558543 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
PDE8A-209ENST00000558543 HIRAP54198 1017 aaPredicted RBP8.26□□□□□ -1.09
PDE8A-209ENST00000558543 SEC13P55735 322 aa8.26□□□□□ -1.09
PDE8A-209ENST00000558543 SPEM2Q0P670 501 aa8.26□□□□□ -1.09
PDE8A-209ENST00000558543 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
PDE8A-209ENST00000558543 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
PDE8A-209ENST00000558543 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
PDE8A-209ENST00000558543 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
PDE8A-209ENST00000558543 BRD7Q9NPI1 651 aa8.26□□□□□ -1.09
PDE8A-209ENST00000558543 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
PDE8A-209ENST00000558543 ATAD2Q6PL18 1390 aa8.25□□□□□ -1.09
PDE8A-209ENST00000558543 PIK3R2O00459 728 aa8.25□□□□□ -1.09
PDE8A-209ENST00000558543 DPYDQ12882 1025 aa8.25□□□□□ -1.09
PDE8A-209ENST00000558543 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
PDE8A-209ENST00000558543 ELOA3CA0A087WX78 387 aaPredicted RBP8.24□□□□□ -1.09
PDE8A-209ENST00000558543 ELOA3DA6NLF2 546 aaPredicted RBP8.24□□□□□ -1.09
PDE8A-209ENST00000558543 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
PDE8A-209ENST00000558543 TYRO3Q06418 890 aa8.24□□□□□ -1.09
PDE8A-209ENST00000558543 ELOA3BQ3SY89 546 aa8.24□□□□□ -1.09
PDE8A-209ENST00000558543 POTEAQ6S8J7 498 aa8.24□□□□□ -1.09
PDE8A-209ENST00000558543 ELOA3Q8NG57 546 aa8.24□□□□□ -1.09
PDE8A-209ENST00000558543 TRIM11Q96F44 468 aa8.24□□□□□ -1.09
PDE8A-209ENST00000558543 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
PDE8A-209ENST00000558543 ANKIB1Q9P2G1 1089 aa8.24□□□□□ -1.09
PDE8A-209ENST00000558543 A6NJR5 290 aa8.23□□□□□ -1.09
PDE8A-209ENST00000558543 ALAS2P22557 587 aa8.23□□□□□ -1.09
PDE8A-209ENST00000558543 PTK7Q13308 1070 aa8.23□□□□□ -1.09
PDE8A-209ENST00000558543 KANK4Q5T7N3 995 aaPredicted RBP8.23□□□□□ -1.09
PDE8A-209ENST00000558543 ALYREFQ86V81 257 aaKnown RBP8.23□□□□□ -1.09
PDE8A-209ENST00000558543 PLVAPQ9BX97 442 aa8.23□□□□□ -1.09
PDE8A-209ENST00000558543 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
PDE8A-209ENST00000558543 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L21D6R901 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 SIN3BO75182 1162 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 KCNH4Q9UQ05 1017 aa8.22□□□□□ -1.09
PDE8A-209ENST00000558543 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
PDE8A-209ENST00000558543 ADAM23O75077 832 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms