RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 CANXP27824 592 aaKnown RBP9.29□□□□□ -0.92
LRRC28-207ENST00000558500 SLC39A6Q13433 755 aa9.29□□□□□ -0.92
LRRC28-207ENST00000558500 EAPPQ56P03 285 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-207ENST00000558500 TBC1D9BQ66K14 1250 aa9.29□□□□□ -0.92
LRRC28-207ENST00000558500 PRR5LQ6MZQ0 368 aa9.29□□□□□ -0.92
LRRC28-207ENST00000558500 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
LRRC28-207ENST00000558500 DLEC1Q9Y238 1755 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 A0A087WZG4 1122 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 EIF5P55010 431 aaKnown RBP9.28□□□□□ -0.92
LRRC28-207ENST00000558500 AKAP4Q5JQC9 854 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 SULT6B1Q6IMI4 303 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 STYK1Q6J9G0 422 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
LRRC28-207ENST00000558500 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 CNKSR1Q969H4 720 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 LGR6Q9HBX8 967 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
LRRC28-207ENST00000558500 EPHX2P34913 555 aa9.27□□□□□ -0.93
LRRC28-207ENST00000558500 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
LRRC28-207ENST00000558500 MAP1SQ66K74 1059 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-207ENST00000558500 PNMA8AQ86V59 439 aaPredicted RBP9.27□□□□□ -0.93
LRRC28-207ENST00000558500 CNTROBQ8N137 903 aa9.27□□□□□ -0.93
LRRC28-207ENST00000558500 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
LRRC28-207ENST00000558500 ABT1Q9ULW3 272 aaKnown RBP9.27□□□□□ -0.93
LRRC28-207ENST00000558500 ZNF541Q9H0D2 1346 aa9.27□□□□□ -0.93
LRRC28-207ENST00000558500 AFDNP55196 1824 aaKnown RBP9.26□□□□□ -0.93
LRRC28-207ENST00000558500 RNMTO43148 476 aaKnown RBP9.26□□□□□ -0.93
LRRC28-207ENST00000558500 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
LRRC28-207ENST00000558500 SRGNP10124 158 aa9.26□□□□□ -0.93
LRRC28-207ENST00000558500 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
LRRC28-207ENST00000558500 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
LRRC28-207ENST00000558500 MASTLQ96GX5 879 aa9.26□□□□□ -0.93
LRRC28-207ENST00000558500 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
LRRC28-207ENST00000558500 STARD3NLO95772 234 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 FXR2P51116 673 aaKnown RBP eCLIP9.25□□□□□ -0.93
LRRC28-207ENST00000558500 CCDC93Q567U6 631 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 POTEHQ6S545 545 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 CAPNS2Q96L46 248 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
LRRC28-207ENST00000558500 TBC1D2BQ9UPU7 963 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 MRC1P22897 1456 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 RNF123Q5XPI4 1314 aa9.25□□□□□ -0.93
LRRC28-207ENST00000558500 IL13P35225 146 aa9.24□□□□□ -0.93
LRRC28-207ENST00000558500 ECE1P42892 770 aa9.24□□□□□ -0.93
LRRC28-207ENST00000558500 ST5P78524 1137 aa9.24□□□□□ -0.93
LRRC28-207ENST00000558500 FKBP4Q02790 459 aaKnown RBP eCLIP9.24□□□□□ -0.93
LRRC28-207ENST00000558500 PIP4P2Q8N4L2 257 aa9.24□□□□□ -0.93
LRRC28-207ENST00000558500 GPR101Q96P66 508 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-207ENST00000558500 SETDB2Q96T68 719 aa9.24□□□□□ -0.93
LRRC28-207ENST00000558500 ZNF277Q9NRM2 450 aaPredicted RBP9.24□□□□□ -0.93
LRRC28-207ENST00000558500 FER1L6Q2WGJ9 1857 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 FZD9O00144 591 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 NPHP1O15259 732 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 IL6STP40189 918 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-207ENST00000558500 CYP4F22Q6NT55 531 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 PAXIP1Q6ZW49 1069 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-207ENST00000558500 GPC2Q8N158 579 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
LRRC28-207ENST00000558500 ZNF330Q9Y3S2 320 aaPredicted RBP9.23□□□□□ -0.93
LRRC28-207ENST00000558500 VIRMAQ69YN4 1812 aaKnown RBP9.23□□□□□ -0.93
LRRC28-207ENST00000558500 ADAMTSL1Q8N6G6 1762 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 NPR1P16066 1061 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 FMR1Q06787 632 aaKnown RBP eCLIP9.22□□□□□ -0.93
LRRC28-207ENST00000558500 GRM1Q13255 1194 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 OLFM4Q6UX06 510 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 TTC5Q8N0Z6 440 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
LRRC28-207ENST00000558500 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-207ENST00000558500 SCN4AP35499 1836 aa9.21□□□□□ -0.93
LRRC28-207ENST00000558500 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.93
LRRC28-207ENST00000558500 DICER1Q9UPY3 1922 aaKnown RBP9.21□□□□□ -0.93
LRRC28-207ENST00000558500 KLRG2A4D1S0 409 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-207ENST00000558500 MAP2K2P36507 400 aa9.21□□□□□ -0.94
LRRC28-207ENST00000558500 IARSP41252 1262 aaKnown RBP9.21□□□□□ -0.94
LRRC28-207ENST00000558500 MTHFSDQ2M296 383 aaKnown RBP9.21□□□□□ -0.94
LRRC28-207ENST00000558500 MORC1Q86VD1 984 aa9.21□□□□□ -0.94
LRRC28-207ENST00000558500 RTKN2Q8IZC4 609 aa9.21□□□□□ -0.94
LRRC28-207ENST00000558500 ZNF496Q96IT1 587 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-207ENST00000558500 POLR3GLQ9BT43 218 aa9.21□□□□□ -0.94
LRRC28-207ENST00000558500 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-207ENST00000558500 TLL2Q9Y6L7 1015 aa9.21□□□□□ -0.94
LRRC28-207ENST00000558500 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.94
LRRC28-207ENST00000558500 THSD7BQ9C0I4 1608 aa9.2□□□□□ -0.94
LRRC28-207ENST00000558500 CA12O43570 354 aa9.2□□□□□ -0.94
LRRC28-207ENST00000558500 AOC2O75106 756 aa9.2□□□□□ -0.94
LRRC28-207ENST00000558500 CST9Q5W186 159 aa9.2□□□□□ -0.94
LRRC28-207ENST00000558500 NPM2Q86SE8 214 aaKnown RBP9.2□□□□□ -0.94
LRRC28-207ENST00000558500 NBPF5PQ86XG9 351 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-207ENST00000558500 SYNE4Q8N205 404 aa9.2□□□□□ -0.94
LRRC28-207ENST00000558500 HEG1Q9ULI3 1381 aa9.2□□□□□ -0.94
LRRC28-207ENST00000558500 SLX4Q8IY92 1834 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 TRAF5O00463 557 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 A1BGP04217 495 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 HMOX1P09601 288 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-207ENST00000558500 ZNF790Q6PG37 636 aa9.19□□□□□ -0.94
LRRC28-207ENST00000558500 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms