RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 HLFQ16534 295 aa16.14■□□□□ 0.17
LRRC28-206ENST00000558471 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
LRRC28-206ENST00000558471 COPS6Q7L5N1 327 aa16.14■□□□□ 0.17
LRRC28-206ENST00000558471 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
LRRC28-206ENST00000558471 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
LRRC28-206ENST00000558471 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
LRRC28-206ENST00000558471 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
LRRC28-206ENST00000558471 CLEC4GQ6UXB4 293 aa16.13■□□□□ 0.17
LRRC28-206ENST00000558471 XAGE3Q8WTP9 111 aa16.13■□□□□ 0.17
LRRC28-206ENST00000558471 MAP3K15Q6ZN16 1313 aa16.13■□□□□ 0.17
LRRC28-206ENST00000558471 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
LRRC28-206ENST00000558471 VAMP4O75379 141 aa16.12■□□□□ 0.17
LRRC28-206ENST00000558471 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
LRRC28-206ENST00000558471 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
LRRC28-206ENST00000558471 KIF6Q6ZMV9 814 aa16.12■□□□□ 0.17
LRRC28-206ENST00000558471 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
LRRC28-206ENST00000558471 ZNF652Q9Y2D9 606 aa16.12■□□□□ 0.17
LRRC28-206ENST00000558471 E9PSI1 815 aa16.11■□□□□ 0.17
LRRC28-206ENST00000558471 TCERG1O14776 1098 aaKnown RBP16.11■□□□□ 0.17
LRRC28-206ENST00000558471 RGL2O15211 777 aa16.11■□□□□ 0.17
LRRC28-206ENST00000558471 HNRNPUQ00839 825 aaKnown RBP eCLIP16.11■□□□□ 0.17
LRRC28-206ENST00000558471 CHMP4AQ9BY43 222 aa16.11■□□□□ 0.17
LRRC28-206ENST00000558471 HYPKQ9NX55 129 aa16.11■□□□□ 0.17
LRRC28-206ENST00000558471 CD2APQ9Y5K6 639 aa16.11■□□□□ 0.17
LRRC28-206ENST00000558471 SERPINB2P05120 415 aa16.1■□□□□ 0.17
LRRC28-206ENST00000558471 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
LRRC28-206ENST00000558471 SETDB2Q96T68 719 aa16.1■□□□□ 0.17
LRRC28-206ENST00000558471 PHAXQ9H814 394 aaKnown RBP16.1■□□□□ 0.17
LRRC28-206ENST00000558471 NRXN2Q9P2S2 1712 aa16.1■□□□□ 0.17
LRRC28-206ENST00000558471 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
LRRC28-206ENST00000558471 CACNA1FO60840 1977 aa16.09■□□□□ 0.17
LRRC28-206ENST00000558471 GIGYF2Q6Y7W6 1299 aaKnown RBP16.09■□□□□ 0.17
LRRC28-206ENST00000558471 NLGN2Q8NFZ4 835 aa16.09■□□□□ 0.17
LRRC28-206ENST00000558471 NIP7Q9Y221 180 aaKnown RBP eCLIP16.09■□□□□ 0.17
LRRC28-206ENST00000558471 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
LRRC28-206ENST00000558471 ANKRD13DQ6ZTN6 518 aa16.07■□□□□ 0.16
LRRC28-206ENST00000558471 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
LRRC28-206ENST00000558471 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
LRRC28-206ENST00000558471 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
LRRC28-206ENST00000558471 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
LRRC28-206ENST00000558471 GPTP24298 496 aa16.06■□□□□ 0.16
LRRC28-206ENST00000558471 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
LRRC28-206ENST00000558471 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
LRRC28-206ENST00000558471 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 FAM177BA6PVY3 158 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 G2E3Q7L622 706 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
LRRC28-206ENST00000558471 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
LRRC28-206ENST00000558471 TGFB2P61812 414 aa16.04■□□□□ 0.16
LRRC28-206ENST00000558471 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
LRRC28-206ENST00000558471 RIC3Q7Z5B4 369 aa16.04■□□□□ 0.16
LRRC28-206ENST00000558471 NBPF5PQ86XG9 351 aaPredicted RBP16.04■□□□□ 0.16
LRRC28-206ENST00000558471 ARFGEF2Q9Y6D5 1785 aa16.04■□□□□ 0.16
LRRC28-206ENST00000558471 ANKRD31Q8N7Z5 1873 aa16.03■□□□□ 0.16
LRRC28-206ENST00000558471 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
LRRC28-206ENST00000558471 HSP90AB3PQ58FF7 597 aa16.03■□□□□ 0.16
LRRC28-206ENST00000558471 SUSD4Q5VX71 490 aa16.03■□□□□ 0.16
LRRC28-206ENST00000558471 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
LRRC28-206ENST00000558471 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
LRRC28-206ENST00000558471 NPHP1O15259 732 aa16.02■□□□□ 0.16
LRRC28-206ENST00000558471 DPEP1P16444 411 aa16.02■□□□□ 0.16
LRRC28-206ENST00000558471 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
LRRC28-206ENST00000558471 ZBED9Q6R2W3 1325 aa16.01■□□□□ 0.15
LRRC28-206ENST00000558471 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
LRRC28-206ENST00000558471 KCNA3P22001 575 aa16.01■□□□□ 0.15
LRRC28-206ENST00000558471 KSR2Q6VAB6 950 aa16.01■□□□□ 0.15
LRRC28-206ENST00000558471 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
LRRC28-206ENST00000558471 PI4KAP2A4QPH2 592 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 ATP5J2-PTCD1G3V325 749 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
LRRC28-206ENST00000558471 CHRNA5P30532 468 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 ST5P78524 1137 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 FLIIQ13045 1269 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 PARP10Q53GL7 1025 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 NLRP10Q86W26 655 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 PI4KAP1Q8N8J0 262 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 ISCA1Q9BUE6 129 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 NYXQ9GZU5 481 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
LRRC28-206ENST00000558471 BRCA1P38398 1863 aaKnown RBP15.99■□□□□ 0.15
LRRC28-206ENST00000558471 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
LRRC28-206ENST00000558471 PPP1R42Q7Z4L9 355 aa15.99■□□□□ 0.15
LRRC28-206ENST00000558471 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
LRRC28-206ENST00000558471 MYD88Q99836 296 aa15.99■□□□□ 0.15
LRRC28-206ENST00000558471 METTL22Q9BUU2 404 aaPredicted RBP15.99■□□□□ 0.15
LRRC28-206ENST00000558471 ADCY9O60503 1353 aa15.99■□□□□ 0.15
LRRC28-206ENST00000558471 NTSR2O95665 410 aa15.98■□□□□ 0.15
LRRC28-206ENST00000558471 PDE6BP35913 854 aa15.98■□□□□ 0.15
LRRC28-206ENST00000558471 TRIM28Q13263 835 aaKnown RBP15.98■□□□□ 0.15
LRRC28-206ENST00000558471 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
LRRC28-206ENST00000558471 GPR162Q16538 588 aa15.98■□□□□ 0.15
LRRC28-206ENST00000558471 C2CD5Q86YS7 1000 aa15.98■□□□□ 0.15
LRRC28-206ENST00000558471 PELP1Q8IZL8 1130 aaKnown RBP15.98■□□□□ 0.15
LRRC28-206ENST00000558471 MRPL50Q8N5N7 158 aaKnown RBP15.98■□□□□ 0.15
LRRC28-206ENST00000558471 SSH1Q8WYL5 1049 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms