RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 ATP7BP35670 1465 aa13.26□□□□□ -0.29
PCAT29-201ENST00000558411 CHL1O00533 1208 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 SGSM2O43147 1006 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 LIG1P18858 919 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 ZNF165P49910 485 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
PCAT29-201ENST00000558411 HYPKQ9NX55 129 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 EXOC6BQ9Y2D4 811 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 TPM4P67936 248 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 VPS53Q5VIR6 699 aa13.25□□□□□ -0.29
PCAT29-201ENST00000558411 CCAR2Q8N163 923 aaKnown RBP13.25□□□□□ -0.29
PCAT29-201ENST00000558411 ATP8B1O43520 1251 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 SKILP12757 684 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 LSG1Q9H089 658 aaKnown RBP13.24□□□□□ -0.29
PCAT29-201ENST00000558411 YY1AP1Q9H869 796 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 ST7Q9NRC1 585 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 N4BP2Q86UW6 1770 aaPredicted RBP13.24□□□□□ -0.29
PCAT29-201ENST00000558411 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 CRYBG1Q9Y4K1 1723 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 USP27XA6NNY8 438 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 ATP8B2P98198 1209 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 CAMK4Q16566 473 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 TM6SF1Q9BZW5 370 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 DACT1Q9NYF0 836 aa13.24□□□□□ -0.29
PCAT29-201ENST00000558411 SETD1AO15047 1707 aaKnown RBP13.23□□□□□ -0.29
PCAT29-201ENST00000558411 PNMA6AP0CW24 399 aaPredicted RBP13.23□□□□□ -0.29
PCAT29-201ENST00000558411 PDCP20941 246 aa13.23□□□□□ -0.29
PCAT29-201ENST00000558411 CCZ1BP86790 482 aa13.23□□□□□ -0.29
PCAT29-201ENST00000558411 CCZ1P86791 482 aaPredicted RBP13.23□□□□□ -0.29
PCAT29-201ENST00000558411 CCDC83Q8IWF9 413 aa13.23□□□□□ -0.29
PCAT29-201ENST00000558411 IL25Q9H293 177 aa13.23□□□□□ -0.29
PCAT29-201ENST00000558411 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
PCAT29-201ENST00000558411 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
PCAT29-201ENST00000558411 FAM83GA6ND36 823 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 GNAI3P08754 354 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 CKAP2LQ8IYA6 745 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 ARGLU1Q9NWB6 273 aaPredicted RBP13.22□□□□□ -0.29
PCAT29-201ENST00000558411 VPS37CA5D8V6 355 aaPredicted RBP13.22□□□□□ -0.29
PCAT29-201ENST00000558411 GOLGA6L4A6NEF3 574 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 GOLGA6L19H0YKK7 550 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 ZRANB2O95218 330 aaKnown RBP eCLIP13.22□□□□□ -0.29
PCAT29-201ENST00000558411 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 CLCN6P51797 869 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 GSDMDP57764 484 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 CCDC93Q567U6 631 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
PCAT29-201ENST00000558411 CFAP65Q6ZU64 1925 aaKnown RBP13.22□□□□□ -0.29
PCAT29-201ENST00000558411 CCDC69A6NI79 296 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 LARGE1O95461 756 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 KCNJ6P48051 423 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCAT29-201ENST00000558411 IQCB1Q15051 598 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 KCNB2Q92953 911 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 RASSF4Q9H2L5 321 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 NRKQ7Z2Y5 1582 aa13.21□□□□□ -0.29
PCAT29-201ENST00000558411 SLC4A2P04920 1241 aa13.21□□□□□ -0.3
PCAT29-201ENST00000558411 CASTP20810 708 aaKnown RBP13.21□□□□□ -0.3
PCAT29-201ENST00000558411 GPS2Q13227 327 aa13.21□□□□□ -0.3
PCAT29-201ENST00000558411 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.3
PCAT29-201ENST00000558411 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.3
PCAT29-201ENST00000558411 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.3
PCAT29-201ENST00000558411 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
PCAT29-201ENST00000558411 GTF3C6Q969F1 213 aa13.2□□□□□ -0.3
PCAT29-201ENST00000558411 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
PCAT29-201ENST00000558411 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
PCAT29-201ENST00000558411 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 CWC15Q9P013 229 aaKnown RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 CTAGE5O15320 804 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 RAB11FIP3O75154 756 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 TPM1P09493 284 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 ST3GAL1Q11201 340 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 CNTROBQ8N137 903 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
PCAT29-201ENST00000558411 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 CYP46A1Q9Y6A2 500 aa13.19□□□□□ -0.3
PCAT29-201ENST00000558411 SIGLEC1Q9BZZ2 1709 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 TNNT3P45378 269 aaPredicted RBP13.18□□□□□ -0.3
PCAT29-201ENST00000558411 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
PCAT29-201ENST00000558411 CHMP3Q9Y3E7 222 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCAT29-201ENST00000558411 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms