RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 TCP11L1Q9NUJ3 509 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 CCDC82Q8N4S0 544 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 EHBP1Q8NDI1 1231 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 AMOTQ4VCS5 1084 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
INO80-205ENST00000558357 NUDT16Q96DE0 195 aaKnown RBP13.05□□□□□ -0.32
INO80-205ENST00000558357 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■■ 28.9
INO80-205ENST00000558357 ADCY5O95622 1261 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 GJB2P29033 226 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 CCDC8Q9H0W5 538 aaPredicted RBP13.04□□□□□ -0.32
INO80-205ENST00000558357 STX6O43752 255 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 GTF2F1P35269 517 aaKnown RBP eCLIP13.04□□□□□ -0.329e-9■■■■■ 35.7
INO80-205ENST00000558357 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 FERMT2Q96AC1 680 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
INO80-205ENST00000558357 MAATS1Q7Z4T9 603 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 ANKIB1Q9P2G1 1089 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 ZPR1O75312 459 aa13.04□□□□□ -0.32
INO80-205ENST00000558357 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
INO80-205ENST00000558357 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 C6orf163Q5TEZ5 329 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 PAXBP1Q9Y5B6 917 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 KIF5BP33176 963 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
INO80-205ENST00000558357 CEP112Q8N8E3 955 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
INO80-205ENST00000558357 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 IARSP41252 1262 aaKnown RBP13.03□□□□□ -0.32
INO80-205ENST00000558357 IFI16Q16666 785 aaKnown RBP13.03□□□□□ -0.32
INO80-205ENST00000558357 TCERG1LQ5VWI1 586 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 DAPK1P53355 1430 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
INO80-205ENST00000558357 ZC3H6P61129 1189 aaKnown RBP13.03□□□□□ -0.32
INO80-205ENST00000558357 PTPRCP08575 1304 aa13.03□□□□□ -0.32
INO80-205ENST00000558357 ZNF165P49910 485 aa13.02□□□□□ -0.32
INO80-205ENST00000558357 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.32
INO80-205ENST00000558357 TTF1Q15361 905 aaPredicted RBP13.02□□□□□ -0.32
INO80-205ENST00000558357 DDX12PQ92771 950 aa13.02□□□□□ -0.32
INO80-205ENST00000558357 FEZ1Q99689 392 aa13.02□□□□□ -0.32
INO80-205ENST00000558357 HYPKQ9NX55 129 aa13.02□□□□□ -0.32
INO80-205ENST00000558357 BIN1O00499 593 aa13.02□□□□□ -0.32
INO80-205ENST00000558357 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.32
INO80-205ENST00000558357 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
INO80-205ENST00000558357 UBE2HP62256 183 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 CEP135Q66GS9 1140 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 CCDC102BQ68D86 513 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 JADE2Q9NQC1 790 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 GOLIM4O00461 696 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 IDEP14735 1019 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 USP16Q9Y5T5 823 aa13.02□□□□□ -0.33
INO80-205ENST00000558357 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
INO80-205ENST00000558357 ECHDC1Q9NTX5 307 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 HMG20BQ9P0W2 317 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
INO80-205ENST00000558357 COMMD10Q9Y6G5 202 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 FERP16591 822 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 SPATA24Q86W54 205 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
INO80-205ENST00000558357 HSF2BPO75031 334 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 UBA7P41226 1012 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 LMAN1P49257 510 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 TSNARE1Q96NA8 513 aa13.01□□□□□ -0.33
INO80-205ENST00000558357 TFIP11Q9UBB9 837 aaKnown RBP13.01□□□□□ -0.33
INO80-205ENST00000558357 DBF4Q9UBU7 674 aaPredicted RBP13.01□□□□□ -0.33
INO80-205ENST00000558357 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
INO80-205ENST00000558357 CCDC171Q6TFL3 1326 aa13□□□□□ -0.33
INO80-205ENST00000558357 PRC1O43663 620 aa13□□□□□ -0.33
INO80-205ENST00000558357 CCDC172P0C7W6 258 aa13□□□□□ -0.33
INO80-205ENST00000558357 CKAP4Q07065 602 aaKnown RBP13□□□□□ -0.33
INO80-205ENST00000558357 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
INO80-205ENST00000558357 DYNC1I1O14576 645 aa13□□□□□ -0.33
INO80-205ENST00000558357 ACTN2P35609 894 aa13□□□□□ -0.33
INO80-205ENST00000558357 GNG11P61952 73 aa13□□□□□ -0.33
INO80-205ENST00000558357 SPTY2D1Q68D10 685 aaPredicted RBP13□□□□□ -0.33
INO80-205ENST00000558357 RMND1Q9NWS8 449 aa13□□□□□ -0.33
INO80-205ENST00000558357 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
INO80-205ENST00000558357 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
INO80-205ENST00000558357 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
INO80-205ENST00000558357 F6X3S4 739 aa12.99□□□□□ -0.33
INO80-205ENST00000558357 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
INO80-205ENST00000558357 BMP2KLQ5H9B9 411 aa12.99□□□□□ -0.33
INO80-205ENST00000558357 GDPD2Q9HCC8 539 aa12.99□□□□□ -0.33
INO80-205ENST00000558357 IKBKGQ9Y6K9 419 aa12.99□□□□□ -0.33
INO80-205ENST00000558357 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms