RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
LRRC49-208ENST00000558204 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
LRRC49-208ENST00000558204 ST5P78524 1137 aa11.1□□□□□ -0.63
LRRC49-208ENST00000558204 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
LRRC49-208ENST00000558204 PRR5LQ6MZQ0 368 aa11.1□□□□□ -0.63
LRRC49-208ENST00000558204 VSIG10Q8N0Z9 540 aa11.1□□□□□ -0.63
LRRC49-208ENST00000558204 ABT1Q9ULW3 272 aaKnown RBP11.1□□□□□ -0.63
LRRC49-208ENST00000558204 FER1L6Q2WGJ9 1857 aa11.09□□□□□ -0.63
LRRC49-208ENST00000558204 HSPA8P11142 646 aaKnown RBP11.09□□□□□ -0.63
LRRC49-208ENST00000558204 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
LRRC49-208ENST00000558204 PRPF40BQ6NWY9 871 aaKnown RBP11.09□□□□□ -0.63
LRRC49-208ENST00000558204 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
LRRC49-208ENST00000558204 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
LRRC49-208ENST00000558204 CFAP44Q96MT7 982 aa11.09□□□□□ -0.63
LRRC49-208ENST00000558204 SETDB2Q96T68 719 aa11.09□□□□□ -0.63
LRRC49-208ENST00000558204 HACL1Q9UJ83 578 aa11.09□□□□□ -0.63
LRRC49-208ENST00000558204 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
LRRC49-208ENST00000558204 EIF5P55010 431 aaKnown RBP11.08□□□□□ -0.64
LRRC49-208ENST00000558204 MLLT1Q03111 559 aaPredicted RBP11.08□□□□□ -0.64
LRRC49-208ENST00000558204 GRM1Q13255 1194 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 MASTLQ96GX5 879 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 BEGAINQ9BUH8 593 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 PANK3Q9H999 370 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 ANKRD31Q8N7Z5 1873 aa11.08□□□□□ -0.64
LRRC49-208ENST00000558204 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
LRRC49-208ENST00000558204 COL11A2P13942 1736 aaPredicted RBP11.07□□□□□ -0.64
LRRC49-208ENST00000558204 ITGBL1O95965 494 aaPredicted RBP11.07□□□□□ -0.64
LRRC49-208ENST00000558204 HMOX1P09601 288 aa11.07□□□□□ -0.64
LRRC49-208ENST00000558204 EPHX2P34913 555 aa11.07□□□□□ -0.64
LRRC49-208ENST00000558204 IL13P35225 146 aa11.07□□□□□ -0.64
LRRC49-208ENST00000558204 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
LRRC49-208ENST00000558204 MAP1SQ66K74 1059 aaPredicted RBP11.07□□□□□ -0.64
LRRC49-208ENST00000558204 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
LRRC49-208ENST00000558204 SCN4AP35499 1836 aa11.07□□□□□ -0.64
LRRC49-208ENST00000558204 RASSF10A6NK89 507 aa11.06□□□□□ -0.64
LRRC49-208ENST00000558204 SRGNP10124 158 aa11.06□□□□□ -0.64
LRRC49-208ENST00000558204 PNMA8AQ86V59 439 aaPredicted RBP11.06□□□□□ -0.64
LRRC49-208ENST00000558204 CNTROBQ8N137 903 aa11.06□□□□□ -0.64
LRRC49-208ENST00000558204 ZNF541Q9H0D2 1346 aa11.06□□□□□ -0.64
LRRC49-208ENST00000558204 MRC1P22897 1456 aa11.06□□□□□ -0.64
LRRC49-208ENST00000558204 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
LRRC49-208ENST00000558204 SLX4Q8IY92 1834 aa11.05□□□□□ -0.64
LRRC49-208ENST00000558204 SPDYE2BA6NHP3 402 aa11.05□□□□□ -0.64
LRRC49-208ENST00000558204 SPDYE6P0CI01 402 aa11.05□□□□□ -0.64
LRRC49-208ENST00000558204 MTHFSDQ2M296 383 aaKnown RBP11.05□□□□□ -0.64
LRRC49-208ENST00000558204 SPDYE2Q495Y8 402 aa11.05□□□□□ -0.64
LRRC49-208ENST00000558204 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
LRRC49-208ENST00000558204 ZNF277Q9NRM2 450 aaPredicted RBP11.05□□□□□ -0.64
LRRC49-208ENST00000558204 RNF123Q5XPI4 1314 aa11.05□□□□□ -0.64
LRRC49-208ENST00000558204 IL6STP40189 918 aaPredicted RBP11.04□□□□□ -0.64
LRRC49-208ENST00000558204 FKBP4Q02790 459 aaKnown RBP eCLIP11.04□□□□□ -0.64
LRRC49-208ENST00000558204 TEFQ10587 303 aa11.04□□□□□ -0.64
LRRC49-208ENST00000558204 NBPF5PQ86XG9 351 aaPredicted RBP11.04□□□□□ -0.64
LRRC49-208ENST00000558204 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
LRRC49-208ENST00000558204 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
LRRC49-208ENST00000558204 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
LRRC49-208ENST00000558204 NPR1P16066 1061 aa11.03□□□□□ -0.64
LRRC49-208ENST00000558204 ECE1P42892 770 aa11.03□□□□□ -0.64
LRRC49-208ENST00000558204 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
LRRC49-208ENST00000558204 ZNF496Q96IT1 587 aaPredicted RBP11.03□□□□□ -0.64
LRRC49-208ENST00000558204 KNSTRNQ9Y448 316 aa11.03□□□□□ -0.64
LRRC49-208ENST00000558204 HEG1Q9ULI3 1381 aa11.03□□□□□ -0.64
LRRC49-208ENST00000558204 CAMTA2O94983 1202 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 A1BGP04217 495 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 LMOD1P29536 600 aaPredicted RBP11.02□□□□□ -0.65
LRRC49-208ENST00000558204 RTKN2Q8IZC4 609 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 CAPNS2Q96L46 248 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.65
LRRC49-208ENST00000558204 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
LRRC49-208ENST00000558204 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
LRRC49-208ENST00000558204 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
LRRC49-208ENST00000558204 CYP4F22Q6NT55 531 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 ZNF790Q6PG37 636 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 OLFM4Q6UX06 510 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 GPC2Q8N158 579 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 SYNE4Q8N205 404 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 GPR101Q96P66 508 aaPredicted RBP11.01□□□□□ -0.65
LRRC49-208ENST00000558204 FMNL2Q96PY5 1086 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
LRRC49-208ENST00000558204 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
LRRC49-208ENST00000558204 GTF2E1P29083 439 aaPredicted RBP11□□□□□ -0.65
LRRC49-208ENST00000558204 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
LRRC49-208ENST00000558204 ADAMTSL1Q8N6G6 1762 aa10.99□□□□□ -0.65
LRRC49-208ENST00000558204 FZD9O00144 591 aa10.99□□□□□ -0.65
LRRC49-208ENST00000558204 DIAPH1O60610 1272 aaKnown RBP10.99□□□□□ -0.65
LRRC49-208ENST00000558204 ALDH1B1P30837 517 aa10.99□□□□□ -0.65
LRRC49-208ENST00000558204 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
LRRC49-208ENST00000558204 RGS19P49795 217 aa10.99□□□□□ -0.65
LRRC49-208ENST00000558204 TPTE2Q6XPS3 522 aa10.99□□□□□ -0.65
LRRC49-208ENST00000558204 GNAT3A8MTJ3 354 aa10.98□□□□□ -0.65
LRRC49-208ENST00000558204 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRRC49-208ENST00000558204 FMR1Q06787 632 aaKnown RBP eCLIP10.98□□□□□ -0.65
LRRC49-208ENST00000558204 GAS2L2Q8NHY3 880 aa10.98□□□□□ -0.65
LRRC49-208ENST00000558204 NIP7Q9Y221 180 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms